Incidental Mutation 'IGL03130:Tcte1'
ID 410290
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Tcte1
Ensembl Gene ENSMUSG00000023949
Gene Name t-complex-associated testis expressed 1
Synonyms D17Sil1, Tcte-1
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # IGL03130
Quality Score
Status
Chromosome 17
Chromosomal Location 45834360-45853605 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 45844222 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Glycine at position 66 (D66G)
Ref Sequence ENSEMBL: ENSMUSP00000109175 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000113547]
AlphaFold A6H639
Predicted Effect probably damaging
Transcript: ENSMUST00000113547
AA Change: D66G

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000109175
Gene: ENSMUSG00000023949
AA Change: D66G

DomainStartEndE-ValueType
low complexity region 6 17 N/A INTRINSIC
low complexity region 28 47 N/A INTRINSIC
low complexity region 206 222 N/A INTRINSIC
Blast:LRR 235 274 7e-14 BLAST
LRR 304 331 5.02e-6 SMART
LRR 332 358 1.28e-3 SMART
LRR 359 386 5.81e-2 SMART
LRR 387 414 2.05e-2 SMART
LRR 415 442 1.13e-4 SMART
Blast:LRR 443 470 3e-8 BLAST
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 44 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abtb3 G T 10: 85,224,347 (GRCm39) probably null Het
Agtpbp1 T C 13: 59,622,403 (GRCm39) E941G possibly damaging Het
Akap11 A T 14: 78,747,808 (GRCm39) Y1526* probably null Het
Brd1 T C 15: 88,572,577 (GRCm39) I1165V probably benign Het
Cdan1 T C 2: 120,558,393 (GRCm39) D473G possibly damaging Het
Clstn3 G A 6: 124,436,222 (GRCm39) L176F probably damaging Het
Ctif T C 18: 75,654,689 (GRCm39) N279S probably benign Het
Dpy19l3 A G 7: 35,452,097 (GRCm39) S16P probably benign Het
Ecpas A T 4: 58,800,288 (GRCm39) C1806S probably benign Het
Fam151b T C 13: 92,586,701 (GRCm39) Y244C probably benign Het
Gbf1 T C 19: 46,255,787 (GRCm39) M750T possibly damaging Het
Gm11564 T A 11: 99,705,879 (GRCm39) T184S unknown Het
Gnptab A G 10: 88,272,233 (GRCm39) K958E possibly damaging Het
Hibch T C 1: 52,924,310 (GRCm39) S162P possibly damaging Het
Itpr1 T C 6: 108,500,362 (GRCm39) S2651P probably benign Het
LTO1 A G 7: 144,470,197 (GRCm39) E42G probably damaging Het
Lyrm1 A G 7: 119,513,403 (GRCm39) D56G probably damaging Het
Manba T C 3: 135,256,920 (GRCm39) Y528H probably damaging Het
Npas2 A C 1: 39,352,109 (GRCm39) E186D probably damaging Het
Or4f61 A T 2: 111,922,166 (GRCm39) D293E probably benign Het
Or7c19 A T 8: 85,957,258 (GRCm39) I45F possibly damaging Het
Or7d11 C A 9: 19,966,668 (GRCm39) L30F probably benign Het
Pcdhb6 T A 18: 37,468,640 (GRCm39) Y520* probably null Het
Plekhm1 C T 11: 103,268,207 (GRCm39) R588H probably benign Het
Psg23 A T 7: 18,344,341 (GRCm39) H371Q probably benign Het
Ptpn12 T C 5: 21,207,610 (GRCm39) probably benign Het
Rela T C 19: 5,689,909 (GRCm39) C120R probably damaging Het
Rps6kc1 T A 1: 190,532,008 (GRCm39) I665F probably damaging Het
Spg21 A G 9: 65,380,990 (GRCm39) Q99R probably benign Het
St14 A G 9: 31,008,367 (GRCm39) probably null Het
Sult1c2 A T 17: 54,137,099 (GRCm39) N274K probably benign Het
Syk T C 13: 52,776,768 (GRCm39) V256A probably benign Het
Tgm4 C T 9: 122,885,580 (GRCm39) T374M probably damaging Het
Tns4 T C 11: 98,959,095 (GRCm39) H668R probably damaging Het
Tsn C T 1: 118,232,999 (GRCm39) A102T possibly damaging Het
Uvssa T A 5: 33,549,189 (GRCm39) S350T possibly damaging Het
Vmn1r3 T A 4: 3,185,214 (GRCm39) Y31F possibly damaging Het
Vmn2r114 A T 17: 23,515,970 (GRCm39) probably benign Het
Vmn2r27 T C 6: 124,169,276 (GRCm39) D618G possibly damaging Het
Vmn2r91 T A 17: 18,330,373 (GRCm39) probably benign Het
Vti1a T C 19: 55,380,279 (GRCm39) Y143H probably damaging Het
Zfand4 T A 6: 116,250,620 (GRCm39) Y17N probably damaging Het
Zfp729a T C 13: 67,767,761 (GRCm39) probably null Het
Zfp827 A G 8: 79,787,586 (GRCm39) T251A probably damaging Het
Other mutations in Tcte1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00094:Tcte1 APN 17 45,845,854 (GRCm39) missense probably damaging 1.00
IGL00945:Tcte1 APN 17 45,852,115 (GRCm39) missense probably benign 0.15
IGL01120:Tcte1 APN 17 45,850,594 (GRCm39) missense probably damaging 0.99
IGL01132:Tcte1 APN 17 45,850,788 (GRCm39) missense possibly damaging 0.93
IGL01884:Tcte1 APN 17 45,850,735 (GRCm39) splice site probably null
IGL02418:Tcte1 APN 17 45,852,128 (GRCm39) missense probably benign 0.37
IGL02731:Tcte1 APN 17 45,850,812 (GRCm39) missense probably benign 0.00
R0358:Tcte1 UTSW 17 45,846,211 (GRCm39) missense probably benign 0.34
R1519:Tcte1 UTSW 17 45,846,178 (GRCm39) missense probably damaging 1.00
R2013:Tcte1 UTSW 17 45,852,237 (GRCm39) missense probably benign 0.30
R2014:Tcte1 UTSW 17 45,852,237 (GRCm39) missense probably benign 0.30
R3744:Tcte1 UTSW 17 45,850,597 (GRCm39) missense probably damaging 0.99
R4250:Tcte1 UTSW 17 45,850,617 (GRCm39) missense probably benign 0.04
R4976:Tcte1 UTSW 17 45,845,854 (GRCm39) missense probably damaging 1.00
R5398:Tcte1 UTSW 17 45,850,752 (GRCm39) nonsense probably null
R6169:Tcte1 UTSW 17 45,845,996 (GRCm39) missense probably benign 0.01
R6251:Tcte1 UTSW 17 45,846,085 (GRCm39) missense probably benign
R6279:Tcte1 UTSW 17 45,844,215 (GRCm39) missense possibly damaging 0.69
R6300:Tcte1 UTSW 17 45,844,215 (GRCm39) missense possibly damaging 0.69
R6316:Tcte1 UTSW 17 45,845,786 (GRCm39) missense probably benign
R6417:Tcte1 UTSW 17 45,846,056 (GRCm39) missense probably damaging 0.97
R6892:Tcte1 UTSW 17 45,844,083 (GRCm39) missense probably benign
R7047:Tcte1 UTSW 17 45,844,294 (GRCm39) missense possibly damaging 0.52
R7645:Tcte1 UTSW 17 45,845,915 (GRCm39) missense probably benign 0.00
R8125:Tcte1 UTSW 17 45,850,618 (GRCm39) missense possibly damaging 0.88
R9710:Tcte1 UTSW 17 45,850,798 (GRCm39) missense possibly damaging 0.94
Z1176:Tcte1 UTSW 17 45,845,997 (GRCm39) missense probably benign
Z1177:Tcte1 UTSW 17 45,845,938 (GRCm39) missense possibly damaging 0.93
Posted On 2016-08-02