Incidental Mutation 'IGL03132:Trim35'
ID |
410379 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Trim35
|
Ensembl Gene |
ENSMUSG00000022043 |
Gene Name |
tripartite motif-containing 35 |
Synonyms |
A430106H13Rik, Hls5, Mair, 0710005M05Rik |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.062)
|
Stock # |
IGL03132
|
Quality Score |
|
Status
|
|
Chromosome |
14 |
Chromosomal Location |
66534480-66548873 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 66546595 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Glutamic Acid to Glycine
at position 454
(E454G)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000022623
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000022623]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000022623
AA Change: E454G
PolyPhen 2
Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)
|
SMART Domains |
Protein: ENSMUSP00000022623 Gene: ENSMUSG00000022043 AA Change: E454G
Domain | Start | End | E-Value | Type |
low complexity region
|
3 |
15 |
N/A |
INTRINSIC |
low complexity region
|
18 |
29 |
N/A |
INTRINSIC |
RING
|
36 |
75 |
6.89e-8 |
SMART |
BBOX
|
111 |
152 |
1.27e-6 |
SMART |
coiled coil region
|
219 |
267 |
N/A |
INTRINSIC |
PRY
|
316 |
367 |
4.41e-15 |
SMART |
Pfam:SPRY
|
370 |
495 |
3.5e-11 |
PFAM |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000121006
|
SMART Domains |
Protein: ENSMUSP00000112877 Gene: ENSMUSG00000022043
Domain | Start | End | E-Value | Type |
low complexity region
|
12 |
23 |
N/A |
INTRINSIC |
RING
|
30 |
69 |
6.89e-8 |
SMART |
BBOX
|
105 |
146 |
1.27e-6 |
SMART |
coiled coil region
|
212 |
260 |
N/A |
INTRINSIC |
low complexity region
|
330 |
343 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. The function of this protein has not been identified. [provided by RefSeq, Jul 2008]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 29 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abtb1 |
G |
A |
6: 88,815,941 (GRCm39) |
R177C |
probably benign |
Het |
Adam21 |
C |
A |
12: 81,607,148 (GRCm39) |
G205* |
probably null |
Het |
Baz2b |
T |
A |
2: 59,738,097 (GRCm39) |
|
probably benign |
Het |
Col6a3 |
C |
T |
1: 90,731,615 (GRCm39) |
G939D |
probably damaging |
Het |
Csf1r |
A |
G |
18: 61,261,171 (GRCm39) |
E749G |
probably benign |
Het |
Dnm3 |
C |
T |
1: 161,838,674 (GRCm39) |
|
probably null |
Het |
Dsg3 |
A |
G |
18: 20,657,653 (GRCm39) |
D241G |
probably damaging |
Het |
Dst |
T |
C |
1: 34,295,722 (GRCm39) |
S6015P |
probably benign |
Het |
Dvl2 |
T |
C |
11: 69,896,514 (GRCm39) |
S183P |
probably benign |
Het |
Exoc6b |
T |
C |
6: 84,768,246 (GRCm39) |
N699S |
possibly damaging |
Het |
Fat2 |
T |
C |
11: 55,144,746 (GRCm39) |
R4043G |
probably benign |
Het |
Gbp9 |
T |
A |
5: 105,232,819 (GRCm39) |
T278S |
possibly damaging |
Het |
Gm2a |
T |
A |
11: 54,994,474 (GRCm39) |
I48N |
probably damaging |
Het |
Gorasp2 |
T |
C |
2: 70,514,379 (GRCm39) |
V232A |
probably benign |
Het |
Gpa33 |
G |
A |
1: 165,980,218 (GRCm39) |
D94N |
probably benign |
Het |
Il1rap |
A |
T |
16: 26,498,869 (GRCm39) |
S123C |
probably damaging |
Het |
Kctd17 |
T |
C |
15: 78,319,887 (GRCm39) |
S102P |
probably damaging |
Het |
Lamb1 |
A |
G |
12: 31,350,333 (GRCm39) |
|
probably null |
Het |
Mfsd1 |
T |
A |
3: 67,495,273 (GRCm39) |
I131K |
possibly damaging |
Het |
Pkhd1l1 |
G |
A |
15: 44,438,013 (GRCm39) |
C3576Y |
probably damaging |
Het |
Pla2g4a |
A |
T |
1: 149,778,035 (GRCm39) |
|
probably benign |
Het |
Ptpn11 |
T |
A |
5: 121,272,878 (GRCm39) |
D575V |
possibly damaging |
Het |
Reck |
A |
T |
4: 43,938,898 (GRCm39) |
R755* |
probably null |
Het |
Scgb2b21 |
A |
G |
7: 33,219,299 (GRCm39) |
V35A |
possibly damaging |
Het |
Srpra |
G |
A |
9: 35,125,574 (GRCm39) |
|
probably null |
Het |
Stk11ip |
T |
C |
1: 75,512,733 (GRCm39) |
S1025P |
probably benign |
Het |
Tmprss9 |
G |
A |
10: 80,730,699 (GRCm39) |
V742M |
probably damaging |
Het |
Trh |
T |
C |
6: 92,220,755 (GRCm39) |
T36A |
probably benign |
Het |
Vmn2r99 |
C |
T |
17: 19,598,485 (GRCm39) |
Q170* |
probably null |
Het |
|
Other mutations in Trim35 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01652:Trim35
|
APN |
14 |
66,546,250 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02398:Trim35
|
APN |
14 |
66,546,697 (GRCm39) |
missense |
probably damaging |
1.00 |
R0759:Trim35
|
UTSW |
14 |
66,546,236 (GRCm39) |
missense |
probably benign |
0.02 |
R0799:Trim35
|
UTSW |
14 |
66,546,650 (GRCm39) |
missense |
probably damaging |
1.00 |
R0848:Trim35
|
UTSW |
14 |
66,546,574 (GRCm39) |
missense |
probably benign |
0.01 |
R1170:Trim35
|
UTSW |
14 |
66,546,248 (GRCm39) |
missense |
probably benign |
0.35 |
R1734:Trim35
|
UTSW |
14 |
66,546,778 (GRCm39) |
missense |
probably damaging |
0.99 |
R1751:Trim35
|
UTSW |
14 |
66,541,617 (GRCm39) |
missense |
probably damaging |
0.97 |
R1767:Trim35
|
UTSW |
14 |
66,541,617 (GRCm39) |
missense |
probably damaging |
0.97 |
R2259:Trim35
|
UTSW |
14 |
66,546,711 (GRCm39) |
nonsense |
probably null |
|
R3963:Trim35
|
UTSW |
14 |
66,541,503 (GRCm39) |
missense |
probably damaging |
1.00 |
R4572:Trim35
|
UTSW |
14 |
66,545,322 (GRCm39) |
missense |
probably damaging |
1.00 |
R5068:Trim35
|
UTSW |
14 |
66,546,421 (GRCm39) |
unclassified |
probably benign |
|
R5069:Trim35
|
UTSW |
14 |
66,546,421 (GRCm39) |
unclassified |
probably benign |
|
R5070:Trim35
|
UTSW |
14 |
66,546,421 (GRCm39) |
unclassified |
probably benign |
|
R5372:Trim35
|
UTSW |
14 |
66,534,715 (GRCm39) |
missense |
possibly damaging |
0.69 |
R5886:Trim35
|
UTSW |
14 |
66,541,503 (GRCm39) |
missense |
probably damaging |
1.00 |
R5886:Trim35
|
UTSW |
14 |
66,541,502 (GRCm39) |
missense |
possibly damaging |
0.92 |
R6018:Trim35
|
UTSW |
14 |
66,546,199 (GRCm39) |
missense |
probably damaging |
1.00 |
R6165:Trim35
|
UTSW |
14 |
66,546,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R6326:Trim35
|
UTSW |
14 |
66,540,653 (GRCm39) |
missense |
possibly damaging |
0.52 |
R6476:Trim35
|
UTSW |
14 |
66,546,244 (GRCm39) |
missense |
probably damaging |
1.00 |
R7084:Trim35
|
UTSW |
14 |
66,546,271 (GRCm39) |
missense |
probably damaging |
0.98 |
R7192:Trim35
|
UTSW |
14 |
66,534,895 (GRCm39) |
missense |
probably damaging |
1.00 |
R7350:Trim35
|
UTSW |
14 |
66,546,654 (GRCm39) |
missense |
probably damaging |
1.00 |
R7546:Trim35
|
UTSW |
14 |
66,540,696 (GRCm39) |
missense |
probably benign |
0.02 |
R7644:Trim35
|
UTSW |
14 |
66,534,546 (GRCm39) |
missense |
unknown |
|
R7916:Trim35
|
UTSW |
14 |
66,546,309 (GRCm39) |
missense |
probably damaging |
1.00 |
R8406:Trim35
|
UTSW |
14 |
66,534,724 (GRCm39) |
missense |
possibly damaging |
0.91 |
R8524:Trim35
|
UTSW |
14 |
66,544,493 (GRCm39) |
missense |
probably damaging |
1.00 |
R8710:Trim35
|
UTSW |
14 |
66,545,367 (GRCm39) |
missense |
probably damaging |
0.99 |
|
Posted On |
2016-08-02 |