Incidental Mutation 'IGL03163:Trcg1'
ID |
411500 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Trcg1
|
Ensembl Gene |
ENSMUSG00000070298 |
Gene Name |
taste receptor cell gene 1 |
Synonyms |
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.070)
|
Stock # |
IGL03163
|
Quality Score |
|
Status
|
|
Chromosome |
9 |
Chromosomal Location |
57143839-57157147 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to C
at 57155630 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Leucine to Proline
at position 761
(L761P)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000091357
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000034846]
[ENSMUST00000093837]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably benign
Transcript: ENSMUST00000034846
|
SMART Domains |
Protein: ENSMUSP00000034846 Gene: ENSMUSG00000032300
Domain | Start | End | E-Value | Type |
low complexity region
|
265 |
284 |
N/A |
INTRINSIC |
low complexity region
|
293 |
299 |
N/A |
INTRINSIC |
low complexity region
|
334 |
347 |
N/A |
INTRINSIC |
low complexity region
|
649 |
675 |
N/A |
INTRINSIC |
low complexity region
|
692 |
728 |
N/A |
INTRINSIC |
low complexity region
|
785 |
799 |
N/A |
INTRINSIC |
low complexity region
|
933 |
951 |
N/A |
INTRINSIC |
low complexity region
|
963 |
977 |
N/A |
INTRINSIC |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000093837
AA Change: L761P
PolyPhen 2
Score 0.924 (Sensitivity: 0.81; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000091357 Gene: ENSMUSG00000070298 AA Change: L761P
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
21 |
N/A |
INTRINSIC |
low complexity region
|
302 |
335 |
N/A |
INTRINSIC |
Blast:SEA
|
449 |
549 |
5e-21 |
BLAST |
low complexity region
|
580 |
594 |
N/A |
INTRINSIC |
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 38 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Actn1 |
T |
A |
12: 80,228,191 (GRCm39) |
D393V |
probably benign |
Het |
Amz2 |
C |
A |
11: 109,319,751 (GRCm39) |
Q46K |
probably benign |
Het |
Ankhd1 |
G |
A |
18: 36,780,681 (GRCm39) |
R1911H |
probably damaging |
Het |
Apba3 |
A |
G |
10: 81,105,057 (GRCm39) |
|
probably null |
Het |
Atxn1l |
T |
C |
8: 110,459,017 (GRCm39) |
N415S |
probably damaging |
Het |
Clu |
C |
T |
14: 66,217,235 (GRCm39) |
S356F |
probably benign |
Het |
Cluh |
T |
C |
11: 74,556,894 (GRCm39) |
V1029A |
probably benign |
Het |
Creb3 |
C |
T |
4: 43,566,315 (GRCm39) |
L274F |
probably damaging |
Het |
Dcaf8 |
T |
C |
1: 172,000,475 (GRCm39) |
V211A |
probably damaging |
Het |
Emilin3 |
G |
A |
2: 160,750,649 (GRCm39) |
Q320* |
probably null |
Het |
Fam131c |
T |
C |
4: 141,110,069 (GRCm39) |
F156L |
probably damaging |
Het |
Fbxw21 |
T |
A |
9: 108,974,552 (GRCm39) |
I323F |
probably benign |
Het |
Fmo9 |
A |
G |
1: 166,502,019 (GRCm39) |
V202A |
possibly damaging |
Het |
Gipr |
C |
T |
7: 18,896,481 (GRCm39) |
W205* |
probably null |
Het |
Gm13941 |
A |
T |
2: 110,928,761 (GRCm39) |
I99K |
unknown |
Het |
Gpr22 |
A |
T |
12: 31,759,171 (GRCm39) |
V317E |
possibly damaging |
Het |
Hace1 |
T |
C |
10: 45,548,701 (GRCm39) |
I582T |
probably damaging |
Het |
Iho1 |
G |
T |
9: 108,282,132 (GRCm39) |
L519I |
probably benign |
Het |
Khdrbs1 |
T |
C |
4: 129,619,508 (GRCm39) |
E211G |
probably benign |
Het |
Lonrf1 |
T |
C |
8: 36,697,484 (GRCm39) |
D500G |
probably benign |
Het |
Lrp2 |
A |
C |
2: 69,331,870 (GRCm39) |
Y1628* |
probably null |
Het |
Lrrc40 |
T |
C |
3: 157,747,224 (GRCm39) |
I112T |
possibly damaging |
Het |
Matr3 |
G |
A |
18: 35,705,644 (GRCm39) |
D190N |
probably damaging |
Het |
Or8c16 |
T |
C |
9: 38,130,710 (GRCm39) |
V194A |
probably benign |
Het |
Ptpn13 |
A |
T |
5: 103,739,212 (GRCm39) |
D2326V |
probably damaging |
Het |
Ptpn3 |
T |
C |
4: 57,222,020 (GRCm39) |
D557G |
probably damaging |
Het |
Rangap1 |
A |
T |
15: 81,600,801 (GRCm39) |
N194K |
probably damaging |
Het |
Rasgef1c |
T |
C |
11: 49,862,200 (GRCm39) |
V363A |
possibly damaging |
Het |
Ric8b |
A |
G |
10: 84,837,686 (GRCm39) |
N498D |
probably damaging |
Het |
Scn1a |
A |
C |
2: 66,148,418 (GRCm39) |
D22E |
probably benign |
Het |
Spc25 |
T |
G |
2: 69,027,548 (GRCm39) |
I115L |
probably damaging |
Het |
Sspo |
A |
G |
6: 48,461,266 (GRCm39) |
H3569R |
probably benign |
Het |
Stra6l |
T |
C |
4: 45,881,455 (GRCm39) |
I439T |
probably benign |
Het |
Trappc12 |
G |
T |
12: 28,796,653 (GRCm39) |
P293Q |
probably damaging |
Het |
Usp15 |
A |
C |
10: 123,007,049 (GRCm39) |
M144R |
probably damaging |
Het |
Vmn2r11 |
T |
C |
5: 109,201,692 (GRCm39) |
I271V |
probably benign |
Het |
Zcchc2 |
T |
C |
1: 105,958,841 (GRCm39) |
V1104A |
probably damaging |
Het |
Zftraf1 |
A |
T |
15: 76,543,474 (GRCm39) |
L13Q |
probably damaging |
Het |
|
Other mutations in Trcg1 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL01727:Trcg1
|
APN |
9 |
57,149,877 (GRCm39) |
missense |
probably damaging |
0.97 |
IGL01727:Trcg1
|
APN |
9 |
57,149,556 (GRCm39) |
missense |
probably benign |
|
IGL02147:Trcg1
|
APN |
9 |
57,153,132 (GRCm39) |
missense |
probably benign |
0.20 |
IGL02329:Trcg1
|
APN |
9 |
57,147,676 (GRCm39) |
missense |
possibly damaging |
0.92 |
IGL02658:Trcg1
|
APN |
9 |
57,149,511 (GRCm39) |
nonsense |
probably null |
|
IGL02852:Trcg1
|
APN |
9 |
57,148,595 (GRCm39) |
missense |
possibly damaging |
0.94 |
FR4589:Trcg1
|
UTSW |
9 |
57,149,485 (GRCm39) |
frame shift |
probably null |
|
R0555:Trcg1
|
UTSW |
9 |
57,149,616 (GRCm39) |
missense |
probably damaging |
1.00 |
R0747:Trcg1
|
UTSW |
9 |
57,149,204 (GRCm39) |
missense |
probably benign |
0.00 |
R1061:Trcg1
|
UTSW |
9 |
57,153,156 (GRCm39) |
missense |
possibly damaging |
0.66 |
R1521:Trcg1
|
UTSW |
9 |
57,149,748 (GRCm39) |
missense |
probably benign |
0.36 |
R1622:Trcg1
|
UTSW |
9 |
57,155,955 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1652:Trcg1
|
UTSW |
9 |
57,152,856 (GRCm39) |
missense |
probably damaging |
0.99 |
R4677:Trcg1
|
UTSW |
9 |
57,153,144 (GRCm39) |
missense |
possibly damaging |
0.94 |
R4879:Trcg1
|
UTSW |
9 |
57,154,003 (GRCm39) |
missense |
probably damaging |
0.99 |
R5013:Trcg1
|
UTSW |
9 |
57,149,562 (GRCm39) |
missense |
probably damaging |
0.99 |
R5141:Trcg1
|
UTSW |
9 |
57,148,587 (GRCm39) |
missense |
probably damaging |
1.00 |
R5690:Trcg1
|
UTSW |
9 |
57,149,094 (GRCm39) |
missense |
probably benign |
0.36 |
R6416:Trcg1
|
UTSW |
9 |
57,148,613 (GRCm39) |
missense |
possibly damaging |
0.46 |
R6980:Trcg1
|
UTSW |
9 |
57,152,856 (GRCm39) |
missense |
probably damaging |
0.99 |
R7022:Trcg1
|
UTSW |
9 |
57,148,852 (GRCm39) |
missense |
possibly damaging |
0.46 |
R7172:Trcg1
|
UTSW |
9 |
57,155,618 (GRCm39) |
missense |
probably benign |
0.01 |
R7276:Trcg1
|
UTSW |
9 |
57,149,862 (GRCm39) |
missense |
probably damaging |
0.99 |
R7412:Trcg1
|
UTSW |
9 |
57,148,766 (GRCm39) |
missense |
probably benign |
0.00 |
R7546:Trcg1
|
UTSW |
9 |
57,155,621 (GRCm39) |
missense |
probably benign |
0.34 |
R7942:Trcg1
|
UTSW |
9 |
57,149,499 (GRCm39) |
missense |
probably benign |
|
R8087:Trcg1
|
UTSW |
9 |
57,155,957 (GRCm39) |
missense |
probably damaging |
0.99 |
R8094:Trcg1
|
UTSW |
9 |
57,149,564 (GRCm39) |
missense |
probably benign |
0.01 |
R8825:Trcg1
|
UTSW |
9 |
57,148,754 (GRCm39) |
missense |
probably benign |
0.19 |
|
Posted On |
2016-08-02 |