Incidental Mutation 'IGL03172:Spata4'
ID 411898
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Spata4
Ensembl Gene ENSMUSG00000031518
Gene Name spermatogenesis associated 4
Synonyms SRG2, TSARG2, 1700001N01Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.057) question?
Stock # IGL03172
Quality Score
Status
Chromosome 8
Chromosomal Location 55053816-55063133 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 55055440 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Isoleucine to Valine at position 147 (I147V)
Ref Sequence ENSEMBL: ENSMUSP00000033917 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000033917]
AlphaFold Q8K3V1
Predicted Effect probably benign
Transcript: ENSMUST00000033917
AA Change: I147V

PolyPhen 2 Score 0.004 (Sensitivity: 0.98; Specificity: 0.59)
SMART Domains Protein: ENSMUSP00000033917
Gene: ENSMUSG00000031518
AA Change: I147V

DomainStartEndE-ValueType
low complexity region 24 37 N/A INTRINSIC
Pfam:CH_2 54 149 1.1e-37 PFAM
Pfam:CAMSAP_CH 56 136 2.9e-12 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000162770
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 44 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
9930111J21Rik1 T C 11: 48,839,003 (GRCm39) H528R probably damaging Het
A530053G22Rik A T 6: 60,379,047 (GRCm39) noncoding transcript Het
Aagab A G 9: 63,542,676 (GRCm39) probably benign Het
Aknad1 A T 3: 108,688,519 (GRCm39) I616F possibly damaging Het
Ap2a1 A C 7: 44,553,479 (GRCm39) D629E probably benign Het
Apc2 C A 10: 80,149,220 (GRCm39) Q1425K probably damaging Het
Asf1b A C 8: 84,694,542 (GRCm39) H102P probably benign Het
Celf6 C T 9: 59,489,565 (GRCm39) A90V probably damaging Het
Chrna2 A T 14: 66,379,688 (GRCm39) Q9L probably benign Het
Csnk1g3 A G 18: 54,086,356 (GRCm39) I420M possibly damaging Het
Eml3 T C 19: 8,916,543 (GRCm39) probably benign Het
Epn3 T C 11: 94,382,456 (GRCm39) N508S possibly damaging Het
Fam120a T C 13: 49,063,812 (GRCm39) Y608C probably damaging Het
Fbn1 A C 2: 125,162,888 (GRCm39) C2133G possibly damaging Het
Fhl5 A G 4: 25,211,309 (GRCm39) F128L probably damaging Het
Fn1 T C 1: 71,680,421 (GRCm39) N428S probably damaging Het
Fxr2 T C 11: 69,540,665 (GRCm39) probably null Het
Gabrp T C 11: 33,504,388 (GRCm39) Y309C probably damaging Het
Golga2 A G 2: 32,182,168 (GRCm39) I50V probably benign Het
Ifi203 C T 1: 173,764,158 (GRCm39) G105R possibly damaging Het
Itgav A T 2: 83,596,190 (GRCm39) Q201L possibly damaging Het
Jade2 T C 11: 51,716,198 (GRCm39) T336A probably damaging Het
Kdm4b A G 17: 56,708,649 (GRCm39) D996G probably damaging Het
Me2 A G 18: 73,903,797 (GRCm39) I557T probably benign Het
Memo1 A C 17: 74,551,996 (GRCm39) L100R probably damaging Het
Mrps2 A G 2: 28,359,818 (GRCm39) N225S probably damaging Het
Ndufa2 A G 18: 36,877,278 (GRCm39) probably null Het
Or2g7 G T 17: 38,378,275 (GRCm39) C71F probably damaging Het
Or7g19 G A 9: 18,856,757 (GRCm39) S271N probably benign Het
Pak5 G T 2: 135,940,310 (GRCm39) Y501* probably null Het
Pot1b A T 17: 56,002,206 (GRCm39) F123I possibly damaging Het
Rev3l T C 10: 39,700,786 (GRCm39) V1761A probably benign Het
Samd3 T A 10: 26,106,064 (GRCm39) V14E probably damaging Het
Slc4a8 G A 15: 100,697,598 (GRCm39) A605T probably benign Het
Smgc A T 15: 91,744,642 (GRCm39) D333V probably damaging Het
Ttc23l G A 15: 10,537,652 (GRCm39) S206L probably benign Het
Vmn2r73 G A 7: 85,507,495 (GRCm39) H606Y probably benign Het
Vsig8 A G 1: 172,387,916 (GRCm39) N2S probably damaging Het
Wdr17 A C 8: 55,114,515 (GRCm39) I667R probably damaging Het
Yif1b A G 7: 28,937,873 (GRCm39) probably null Het
Zbtb5 A T 4: 44,994,003 (GRCm39) H460Q possibly damaging Het
Zdhhc21 G A 4: 82,724,564 (GRCm39) probably benign Het
Zfp944 A T 17: 22,559,018 (GRCm39) H76Q probably damaging Het
Zkscan1 A G 5: 138,092,264 (GRCm39) Q146R probably benign Het
Other mutations in Spata4
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01486:Spata4 APN 8 55,055,341 (GRCm39) splice site probably benign
IGL02418:Spata4 APN 8 55,062,978 (GRCm39) missense probably benign 0.00
IGL02685:Spata4 APN 8 55,053,963 (GRCm39) missense probably benign 0.02
R0885:Spata4 UTSW 8 55,053,879 (GRCm39) missense probably damaging 0.98
R2237:Spata4 UTSW 8 55,055,664 (GRCm39) missense probably benign 0.06
R2238:Spata4 UTSW 8 55,055,664 (GRCm39) missense probably benign 0.06
R2239:Spata4 UTSW 8 55,055,664 (GRCm39) missense probably benign 0.06
R4430:Spata4 UTSW 8 55,054,878 (GRCm39) missense probably benign 0.03
R4915:Spata4 UTSW 8 55,055,471 (GRCm39) splice site probably null
R6508:Spata4 UTSW 8 55,053,887 (GRCm39) missense probably benign
R6809:Spata4 UTSW 8 55,055,368 (GRCm39) missense possibly damaging 0.82
R7148:Spata4 UTSW 8 55,055,585 (GRCm39) missense probably benign 0.17
R8851:Spata4 UTSW 8 55,062,935 (GRCm39) missense probably benign 0.04
R9071:Spata4 UTSW 8 55,055,742 (GRCm39) missense probably damaging 1.00
R9339:Spata4 UTSW 8 55,053,899 (GRCm39) missense probably benign 0.00
Posted On 2016-08-02