Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL03173:Trav13-5'

411929

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Trav13-5

Ensembl Gene

ENSMUSG00000087666

Gene Name

T cell receptor alpha variable 13-5

Synonyms

B230359F08Rik

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.055) question?

Stock #

IGL03173

Quality Score

Status

Chromosome

Chromosomal Location

54032912-54033420 bp(+) (GRCm39)

Type of Mutation

unclassified

DNA Base Change (assembly)

T to C at 54033534 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000100448 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000103671]

AlphaFold

A0A0B4J1K3

Predicted Effect

probably benign
Transcript: ENSMUST00000103671

SMART Domains

Protein: ENSMUSP00000100448
Gene: ENSMUSG00000087666

Domain	Start	End	E-Value	Type
IGv	38	108	3.01e-7	SMART

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 25 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Atg2b	T	C	12: 105,624,553 (GRCm39)	K649E	possibly damaging	Het
Cnnm4	A	G	1: 36,512,173 (GRCm39)		probably benign	Het
Cntrob	C	T	11: 69,200,853 (GRCm39)	A503T	possibly damaging	Het
D3Ertd751e	T	A	3: 41,710,497 (GRCm39)	Y170N	probably damaging	Het
Ddx23	T	C	15: 98,548,885 (GRCm39)	I306V	probably benign	Het
Ep400	A	G	5: 110,856,737 (GRCm39)		probably benign	Het
Gmps	T	C	3: 63,897,750 (GRCm39)	V234A	probably damaging	Het
Hivep2	G	T	10: 14,003,726 (GRCm39)	G108V	possibly damaging	Het
Irgc	T	C	7: 24,132,727 (GRCm39)	E30G	probably damaging	Het
Krt75	T	C	15: 101,481,162 (GRCm39)	Y204C	probably damaging	Het
Ms4a14	G	A	19: 11,281,560 (GRCm39)	L333F	possibly damaging	Het
Or51l4	A	G	7: 103,404,183 (GRCm39)	V203A	probably benign	Het
Or5an6	T	A	19: 12,372,410 (GRCm39)	M261K	possibly damaging	Het
Or8k27	A	T	2: 86,275,788 (GRCm39)	C179*	probably null	Het
Pitpnm3	G	A	11: 71,983,389 (GRCm39)	T80I	probably benign	Het
Pou2f2	T	C	7: 24,799,371 (GRCm39)		probably benign	Het
Slc34a1	T	C	13: 55,561,089 (GRCm39)	L518P	probably damaging	Het
Sorbs1	T	A	19: 40,351,706 (GRCm39)	T235S	probably damaging	Het
Ssxa1	C	T	X: 20,985,224 (GRCm39)	R41C	probably benign	Het
Syt2	A	G	1: 134,671,317 (GRCm39)	N142D	possibly damaging	Het
Taf3	A	G	2: 9,957,738 (GRCm39)	V143A	probably damaging	Het
Tti1	A	G	2: 157,848,932 (GRCm39)		probably benign	Het
Vmn2r13	T	C	5: 109,319,645 (GRCm39)	E445G	possibly damaging	Het
Zfp663	G	T	2: 165,194,419 (GRCm39)	T600K	probably damaging	Het
Zfp750	G	A	11: 121,404,651 (GRCm39)	Q75*	probably null	Het

Other mutations in Trav13-5

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
R0331:Trav13-5	UTSW	14	54,033,205 (GRCm39)	missense	probably benign	0.01
R4798:Trav13-5	UTSW	14	54,033,408 (GRCm39)	missense	probably damaging	1.00
R6334:Trav13-5	UTSW	14	54,033,399 (GRCm39)	missense	probably damaging	0.98
R8281:Trav13-5	UTSW	14	54,032,918 (GRCm39)	missense	possibly damaging	0.48
R9409:Trav13-5	UTSW	14	54,033,277 (GRCm39)	missense	possibly damaging	0.67
Z1177:Trav13-5	UTSW	14	54,032,964 (GRCm39)	critical splice donor site	probably benign

Posted On

2016-08-02