Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL03178:Gm5884'

412090

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Gm5884

Ensembl Gene

ENSMUSG00000037827

Gene Name

predicted pseudogene 5884

Synonyms

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.214) question?

Stock #

IGL03178

Quality Score

Status

Chromosome

Chromosomal Location

128621876-128623354 bp(+) (GRCm39)

Type of Mutation

unclassified

DNA Base Change (assembly)

T to C at 128622690 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Gene Model

predicted gene model for transcript(s):

AlphaFold

no structure available at present

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000036712

SMART Domains

Protein: ENSMUSP00000036849
Gene: ENSMUSG00000037827

Domain	Start	End	E-Value	Type
VHS	13	148	4.03e-68	SMART
Pfam:GAT	228	303	1e-24	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000203669

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000204875

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 47 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Add1	A	G	5: 34,771,589 (GRCm39)		probably null	Het
Afg2a	T	C	3: 37,632,932 (GRCm39)	L846P	probably damaging	Het
Alpk1	A	T	3: 127,473,870 (GRCm39)	L711*	probably null	Het
Arfgef3	A	T	10: 18,488,973 (GRCm39)	W1291R	probably damaging	Het
Arhgef10l	A	G	4: 140,271,739 (GRCm39)	V545A	possibly damaging	Het
Best3	A	G	10: 116,824,684 (GRCm39)	Y50C	probably damaging	Het
C1qtnf2	C	A	11: 43,381,816 (GRCm39)	D179E	probably damaging	Het
Cdc40	A	T	10: 40,723,985 (GRCm39)	S268T	probably benign	Het
Ces1a	C	T	8: 93,747,517 (GRCm39)	G505R	probably damaging	Het
Cpd	A	T	11: 76,696,877 (GRCm39)	N683K	probably benign	Het
D430041D05Rik	A	T	2: 104,051,556 (GRCm39)	I767N	probably damaging	Het
Diras1	G	T	10: 80,858,211 (GRCm39)	F13L	possibly damaging	Het
Dnah7c	A	G	1: 46,506,525 (GRCm39)	N201D	probably benign	Het
Dpy19l3	A	T	7: 35,429,154 (GRCm39)	Y9*	probably null	Het
Ect2	T	A	3: 27,203,009 (GRCm39)	I79L	probably benign	Het
Eif2b4	A	T	5: 31,344,997 (GRCm39)	I550N	probably damaging	Het
Enpp2	T	A	15: 54,729,402 (GRCm39)	M476L	probably benign	Het
Gm20425	A	G	9: 103,087,751 (GRCm39)	Y654H	probably damaging	Het
Gtf3c6	A	T	10: 40,125,718 (GRCm39)	D166E	probably benign	Het
Gucy2c	A	T	6: 136,706,237 (GRCm39)		probably benign	Het
Inpp5b	A	G	4: 124,679,047 (GRCm39)	T485A	probably benign	Het
Insrr	A	G	3: 87,709,848 (GRCm39)		probably null	Het
Lig3	T	C	11: 82,680,548 (GRCm39)		probably benign	Het
Lmo7	T	A	14: 102,166,696 (GRCm39)	Y1047*	probably null	Het
Map4k4	A	G	1: 40,025,853 (GRCm39)	E281G	possibly damaging	Het
Mmel1	A	G	4: 154,975,311 (GRCm39)	T431A	possibly damaging	Het
Myh10	T	C	11: 68,590,239 (GRCm39)	V58A	probably benign	Het
Myo1e	A	T	9: 70,194,231 (GRCm39)	H14L	possibly damaging	Het
Myo1g	C	T	11: 6,462,181 (GRCm39)	V594M	probably damaging	Het
Nr4a2	G	A	2: 57,000,778 (GRCm39)	R226C	probably damaging	Het
Obox3	A	G	7: 15,361,202 (GRCm39)	L21P	probably benign	Het
Or2y13	A	G	11: 49,414,817 (GRCm39)	D89G	possibly damaging	Het
Pate12	T	G	9: 36,344,132 (GRCm39)	S38R	probably benign	Het
Phlpp1	T	A	1: 106,320,118 (GRCm39)	I1371N	probably damaging	Het
Pramel29	A	G	4: 143,934,821 (GRCm39)		probably null	Het
Proser3	G	A	7: 30,243,034 (GRCm39)	A181V	probably damaging	Het
Pudp	A	T	18: 50,701,472 (GRCm39)	L87Q	probably benign	Het
Siglecf	T	C	7: 43,008,163 (GRCm39)	S559P	probably damaging	Het
Slc22a16	A	G	10: 40,449,756 (GRCm39)	H85R	probably benign	Het
Spata32	T	C	11: 103,101,588 (GRCm39)	D15G	probably benign	Het
Szt2	G	A	4: 118,239,886 (GRCm39)	A1899V	unknown	Het
Tomm40	C	T	7: 19,435,759 (GRCm39)	V324M	probably damaging	Het
Trgv7	C	A	13: 19,362,211 (GRCm39)		probably benign	Het
Ttll4	C	T	1: 74,719,567 (GRCm39)	P25S	probably damaging	Het
Vps13b	G	T	15: 35,869,446 (GRCm39)	C2650F	probably damaging	Het
Wdr83os	T	C	8: 85,807,870 (GRCm39)	L40P	probably damaging	Het
Zfp977	T	C	7: 42,232,072 (GRCm39)	R64G	probably damaging	Het

Other mutations in Gm5884

Allele	Source	Chr	Coord	Type	Predicted Effect
IGL00482:Gm5884	APN	6	128,623,166 (GRCm39)	unclassified	noncoding transcript
IGL01668:Gm5884	APN	6	128,622,377 (GRCm39)	unclassified	noncoding transcript
IGL01730:Gm5884	APN	6	128,622,669 (GRCm39)	unclassified	noncoding transcript
IGL02401:Gm5884	APN	6	128,622,377 (GRCm39)	unclassified	noncoding transcript
IGL02601:Gm5884	APN	6	128,622,749 (GRCm39)	unclassified	noncoding transcript
IGL02812:Gm5884	APN	6	128,622,738 (GRCm39)	unclassified	noncoding transcript
R0488:Gm5884	UTSW	6	128,623,031 (GRCm39)	unclassified	noncoding transcript
R1633:Gm5884	UTSW	6	128,623,028 (GRCm39)	unclassified	noncoding transcript
R1925:Gm5884	UTSW	6	128,622,050 (GRCm39)	unclassified	noncoding transcript
R2919:Gm5884	UTSW	6	128,622,021 (GRCm39)	unclassified	noncoding transcript
R4640:Gm5884	UTSW	6	128,622,734 (GRCm39)	unclassified	noncoding transcript

Posted On

2016-08-02