Incidental Mutation 'IGL03197:Wapl'
| ID |
412843 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Wapl
|
| Ensembl Gene |
ENSMUSG00000041408 |
| Gene Name |
WAPL cohesin release factor |
| Synonyms |
A530089A20Rik, Wapal |
| Accession Numbers |
|
| Essential gene? |
Essential
(E-score: 1.000)
|
| Stock # |
IGL03197
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
14 |
| Chromosomal Location |
34673928-34747983 bp(+) (GRCm38) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to T
at 34745631 bp (GRCm38)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Phenylalanine
at position 1182
(V1182F)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000130547
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000048263]
[ENSMUST00000090027]
[ENSMUST00000169910]
|
| AlphaFold |
Q65Z40 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000048263
AA Change: V1182F
PolyPhen 2
Score 0.766 (Sensitivity: 0.85; Specificity: 0.92)
|
| SMART Domains |
Protein: ENSMUSP00000040232
Gene: ENSMUSG00000041408
AA Change: V1182F
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
436 |
455 |
N/A |
INTRINSIC |
|
low complexity region
|
465 |
477 |
N/A |
INTRINSIC |
|
low complexity region
|
493 |
513 |
N/A |
INTRINSIC |
|
Pfam:WAPL
|
645 |
1009 |
6.5e-153 |
PFAM |
|
low complexity region
|
1018 |
1033 |
N/A |
INTRINSIC |
|
low complexity region
|
1101 |
1112 |
N/A |
INTRINSIC |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000090027
AA Change: V1176F
PolyPhen 2
Score 0.766 (Sensitivity: 0.85; Specificity: 0.92)
|
| SMART Domains |
Protein: ENSMUSP00000087481
Gene: ENSMUSG00000041408
AA Change: V1176F
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
436 |
455 |
N/A |
INTRINSIC |
|
low complexity region
|
465 |
477 |
N/A |
INTRINSIC |
|
low complexity region
|
493 |
513 |
N/A |
INTRINSIC |
|
Pfam:WAPL
|
639 |
1003 |
2.6e-153 |
PFAM |
|
low complexity region
|
1012 |
1027 |
N/A |
INTRINSIC |
|
low complexity region
|
1095 |
1106 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000111895
|
| Predicted Effect |
unknown
Transcript: ENSMUST00000151285
AA Change: V411F
|
| SMART Domains |
Protein: ENSMUSP00000117282
Gene: ENSMUSG00000041408
AA Change: V411F
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:WAPL
|
1 |
281 |
1.1e-78 |
PFAM |
|
coiled coil region
|
329 |
351 |
N/A |
INTRINSIC |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000169910
AA Change: V1182F
PolyPhen 2
Score 0.766 (Sensitivity: 0.85; Specificity: 0.92)
|
| SMART Domains |
Protein: ENSMUSP00000130547
Gene: ENSMUSG00000041408
AA Change: V1182F
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
436 |
455 |
N/A |
INTRINSIC |
|
low complexity region
|
465 |
477 |
N/A |
INTRINSIC |
|
low complexity region
|
493 |
513 |
N/A |
INTRINSIC |
|
Pfam:WAPL
|
647 |
1008 |
3.5e-120 |
PFAM |
|
low complexity region
|
1018 |
1033 |
N/A |
INTRINSIC |
|
low complexity region
|
1101 |
1112 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000174559
|
| SMART Domains |
Protein: ENSMUSP00000133779
Gene: ENSMUSG00000041408
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:WAPL
|
1 |
55 |
8.6e-22 |
PFAM |
|
low complexity region
|
64 |
79 |
N/A |
INTRINSIC |
|
coiled coil region
|
119 |
141 |
N/A |
INTRINSIC |
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Studies suggest that the protein encoded by this gene is important for the release of cohesin from chromatin. This gene product is thought to be essential for development, and reduced expression of this gene in cells causes defects in chromatin structure. High levels of expression of the human ortholog of this gene are observed in cervical cancers, and expression of the human ortholog of this gene in mice results in tumor formation. Alternative splicing results in multiple transcript variants encoding different protein isoforms. [provided by RefSeq, Aug 2014]
PHENOTYPE: Mice homozygous for a targeted allele exhibit prenatal lethality. [provided by MGI curators]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 39 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 1700030J22Rik |
A |
G |
8: 116,971,802 (GRCm38) |
W189R |
probably damaging |
Het |
| Abcb7 |
A |
T |
X: 104,284,191 (GRCm38) |
M704K |
possibly damaging |
Het |
| Anp32e |
A |
G |
3: 95,937,052 (GRCm38) |
D71G |
probably damaging |
Het |
| Asphd1 |
T |
C |
7: 126,946,126 (GRCm38) |
D353G |
probably damaging |
Het |
| Baz2b |
T |
C |
2: 59,901,554 (GRCm38) |
K2047E |
possibly damaging |
Het |
| Cyp2c39 |
G |
T |
19: 39,566,917 (GRCm38) |
V394F |
probably damaging |
Het |
| Ddx43 |
G |
A |
9: 78,418,120 (GRCm38) |
M482I |
probably benign |
Het |
| Dnah2 |
A |
T |
11: 69,459,263 (GRCm38) |
V2348E |
probably damaging |
Het |
| Fam135a |
A |
G |
1: 24,044,182 (GRCm38) |
F304L |
probably damaging |
Het |
| Gabra3 |
A |
G |
X: 72,540,128 (GRCm38) |
I66T |
possibly damaging |
Het |
| Irf4 |
A |
T |
13: 30,763,520 (GRCm38) |
|
probably benign |
Het |
| Kif11 |
A |
G |
19: 37,407,027 (GRCm38) |
D578G |
probably benign |
Het |
| Lrig1 |
A |
G |
6: 94,606,118 (GRCm38) |
S1006P |
probably benign |
Het |
| Mfsd14a |
A |
C |
3: 116,636,363 (GRCm38) |
S307A |
probably benign |
Het |
| Mill1 |
A |
G |
7: 18,264,665 (GRCm38) |
T267A |
probably benign |
Het |
| Nfyc |
C |
A |
4: 120,773,761 (GRCm38) |
D62Y |
probably damaging |
Het |
| Nin |
T |
C |
12: 70,026,810 (GRCm38) |
T1190A |
probably benign |
Het |
| Nup42 |
T |
C |
5: 24,167,465 (GRCm38) |
S84P |
probably damaging |
Het |
| Ociad1 |
T |
C |
5: 73,294,332 (GRCm38) |
S15P |
probably benign |
Het |
| Or4c104 |
A |
T |
2: 88,756,201 (GRCm38) |
I158K |
probably damaging |
Het |
| Or6c69c |
A |
T |
10: 130,074,679 (GRCm38) |
I90F |
probably damaging |
Het |
| Or7g25 |
A |
G |
9: 19,248,802 (GRCm38) |
I199T |
probably benign |
Het |
| Pcdhb11 |
T |
A |
18: 37,422,424 (GRCm38) |
L269* |
probably null |
Het |
| Pigo |
A |
C |
4: 43,022,103 (GRCm38) |
M352R |
possibly damaging |
Het |
| Plch1 |
T |
C |
3: 63,753,170 (GRCm38) |
M343V |
probably damaging |
Het |
| Podnl1 |
G |
A |
8: 84,132,189 (GRCm38) |
V548I |
probably benign |
Het |
| Prkag1 |
A |
G |
15: 98,815,177 (GRCm38) |
|
probably benign |
Het |
| Rasa4 |
A |
G |
5: 136,102,012 (GRCm38) |
K379R |
probably damaging |
Het |
| Rraga |
G |
A |
4: 86,576,276 (GRCm38) |
A120T |
probably damaging |
Het |
| Serpina3a |
C |
T |
12: 104,116,241 (GRCm38) |
A91V |
probably damaging |
Het |
| Sik2 |
T |
C |
9: 50,895,773 (GRCm38) |
E779G |
probably damaging |
Het |
| Slc15a3 |
T |
G |
19: 10,855,079 (GRCm38) |
|
probably null |
Het |
| Smc1b |
C |
T |
15: 85,070,863 (GRCm38) |
D1063N |
possibly damaging |
Het |
| Speer1e |
T |
G |
5: 11,183,113 (GRCm38) |
N14K |
probably damaging |
Het |
| Speer1k |
T |
A |
5: 10,950,534 (GRCm38) |
|
probably benign |
Het |
| Srsf12 |
G |
A |
4: 33,231,040 (GRCm38) |
G183E |
probably damaging |
Het |
| Taf8 |
A |
G |
17: 47,498,202 (GRCm38) |
S112P |
probably benign |
Het |
| Trhde |
A |
G |
10: 114,413,308 (GRCm38) |
L851P |
probably benign |
Het |
| Zfp326 |
A |
G |
5: 105,891,193 (GRCm38) |
I231V |
probably benign |
Het |
|
| Other mutations in Wapl |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00335:Wapl
|
APN |
14 |
34,692,636 (GRCm38) |
missense |
probably benign |
0.00 |
|
IGL00539:Wapl
|
APN |
14 |
34,695,008 (GRCm38) |
missense |
probably damaging |
1.00 |
|
IGL00846:Wapl
|
APN |
14 |
34,692,744 (GRCm38) |
splice site |
probably benign |
|
|
IGL01070:Wapl
|
APN |
14 |
34,745,622 (GRCm38) |
unclassified |
probably benign |
|
|
IGL01516:Wapl
|
APN |
14 |
34,692,081 (GRCm38) |
missense |
probably damaging |
1.00 |
|
IGL02021:Wapl
|
APN |
14 |
34,722,336 (GRCm38) |
missense |
probably benign |
|
|
IGL02209:Wapl
|
APN |
14 |
34,677,261 (GRCm38) |
missense |
possibly damaging |
0.46 |
|
IGL02309:Wapl
|
APN |
14 |
34,744,863 (GRCm38) |
missense |
probably damaging |
0.98 |
|
IGL02471:Wapl
|
APN |
14 |
34,691,920 (GRCm38) |
missense |
possibly damaging |
0.68 |
|
IGL02965:Wapl
|
APN |
14 |
34,739,224 (GRCm38) |
intron |
probably benign |
|
|
IGL03076:Wapl
|
APN |
14 |
34,692,089 (GRCm38) |
missense |
probably benign |
0.26 |
|
Mcclintock
|
UTSW |
14 |
34,730,662 (GRCm38) |
critical splice donor site |
probably null |
|
|
Tatum
|
UTSW |
14 |
34,729,195 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R0045:Wapl
|
UTSW |
14 |
34,733,794 (GRCm38) |
missense |
probably benign |
0.18 |
|
R0278:Wapl
|
UTSW |
14 |
34,692,612 (GRCm38) |
missense |
possibly damaging |
0.68 |
|
R0335:Wapl
|
UTSW |
14 |
34,692,324 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R1018:Wapl
|
UTSW |
14 |
34,691,906 (GRCm38) |
missense |
possibly damaging |
0.91 |
|
R1295:Wapl
|
UTSW |
14 |
34,724,769 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R1553:Wapl
|
UTSW |
14 |
34,729,190 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R1868:Wapl
|
UTSW |
14 |
34,692,458 (GRCm38) |
missense |
probably benign |
0.00 |
|
R1909:Wapl
|
UTSW |
14 |
34,691,912 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R2698:Wapl
|
UTSW |
14 |
34,691,777 (GRCm38) |
missense |
probably benign |
|
|
R2990:Wapl
|
UTSW |
14 |
34,736,708 (GRCm38) |
missense |
probably damaging |
0.98 |
|
R3121:Wapl
|
UTSW |
14 |
34,729,215 (GRCm38) |
missense |
possibly damaging |
0.93 |
|
R3122:Wapl
|
UTSW |
14 |
34,729,215 (GRCm38) |
missense |
possibly damaging |
0.93 |
|
R3147:Wapl
|
UTSW |
14 |
34,725,149 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R3732:Wapl
|
UTSW |
14 |
34,736,764 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R3732:Wapl
|
UTSW |
14 |
34,736,764 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R3733:Wapl
|
UTSW |
14 |
34,736,764 (GRCm38) |
missense |
probably damaging |
0.99 |
|
R3878:Wapl
|
UTSW |
14 |
34,692,147 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R4034:Wapl
|
UTSW |
14 |
34,737,914 (GRCm38) |
missense |
possibly damaging |
0.92 |
|
R4934:Wapl
|
UTSW |
14 |
34,692,095 (GRCm38) |
missense |
probably benign |
0.11 |
|
R5079:Wapl
|
UTSW |
14 |
34,724,757 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R5104:Wapl
|
UTSW |
14 |
34,692,059 (GRCm38) |
nonsense |
probably null |
|
|
R5113:Wapl
|
UTSW |
14 |
34,724,754 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R5121:Wapl
|
UTSW |
14 |
34,677,162 (GRCm38) |
missense |
probably benign |
0.01 |
|
R5222:Wapl
|
UTSW |
14 |
34,736,685 (GRCm38) |
nonsense |
probably null |
|
|
R5299:Wapl
|
UTSW |
14 |
34,733,808 (GRCm38) |
critical splice donor site |
probably null |
|
|
R5387:Wapl
|
UTSW |
14 |
34,677,295 (GRCm38) |
missense |
probably benign |
0.00 |
|
R5541:Wapl
|
UTSW |
14 |
34,730,662 (GRCm38) |
critical splice donor site |
probably null |
|
|
R5618:Wapl
|
UTSW |
14 |
34,691,906 (GRCm38) |
missense |
possibly damaging |
0.91 |
|
R5802:Wapl
|
UTSW |
14 |
34,692,320 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R6029:Wapl
|
UTSW |
14 |
34,739,247 (GRCm38) |
missense |
possibly damaging |
0.94 |
|
R6292:Wapl
|
UTSW |
14 |
34,729,195 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R6482:Wapl
|
UTSW |
14 |
34,692,692 (GRCm38) |
missense |
probably benign |
0.01 |
|
R6487:Wapl
|
UTSW |
14 |
34,692,292 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R6925:Wapl
|
UTSW |
14 |
34,677,363 (GRCm38) |
missense |
probably benign |
0.31 |
|
R6937:Wapl
|
UTSW |
14 |
34,722,354 (GRCm38) |
missense |
probably benign |
0.01 |
|
R7080:Wapl
|
UTSW |
14 |
34,692,356 (GRCm38) |
missense |
probably benign |
0.03 |
|
R7203:Wapl
|
UTSW |
14 |
34,736,691 (GRCm38) |
missense |
probably benign |
|
|
R7944:Wapl
|
UTSW |
14 |
34,677,148 (GRCm38) |
missense |
probably benign |
0.00 |
|
R7945:Wapl
|
UTSW |
14 |
34,677,148 (GRCm38) |
missense |
probably benign |
0.00 |
|
R7969:Wapl
|
UTSW |
14 |
34,730,647 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R8038:Wapl
|
UTSW |
14 |
34,691,682 (GRCm38) |
missense |
probably benign |
|
|
R8053:Wapl
|
UTSW |
14 |
34,692,321 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R8688:Wapl
|
UTSW |
14 |
34,692,592 (GRCm38) |
missense |
possibly damaging |
0.94 |
|
R8864:Wapl
|
UTSW |
14 |
34,692,202 (GRCm38) |
missense |
probably benign |
0.03 |
|
R8988:Wapl
|
UTSW |
14 |
34,729,182 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R9072:Wapl
|
UTSW |
14 |
34,677,460 (GRCm38) |
missense |
possibly damaging |
0.81 |
|
R9197:Wapl
|
UTSW |
14 |
34,722,287 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R9259:Wapl
|
UTSW |
14 |
34,741,095 (GRCm38) |
missense |
probably benign |
0.00 |
|
R9545:Wapl
|
UTSW |
14 |
34,677,093 (GRCm38) |
missense |
probably damaging |
1.00 |
|
R9613:Wapl
|
UTSW |
14 |
34,731,563 (GRCm38) |
missense |
probably benign |
0.29 |
|
R9624:Wapl
|
UTSW |
14 |
34,692,106 (GRCm38) |
missense |
possibly damaging |
0.89 |
|
Z1177:Wapl
|
UTSW |
14 |
34,745,690 (GRCm38) |
makesense |
probably null |
|
|
| Posted On |
2016-08-02 |
Incidental Mutation