Incidental Mutation 'IGL03201:A4galt'
ID 412993
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol A4galt
Ensembl Gene ENSMUSG00000047878
Gene Name alpha 1,4-galactosyltransferase
Synonyms Gb3 synthase
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # IGL03201
Quality Score
Status
Chromosome 15
Chromosomal Location 83110923-83135930 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 83112468 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamic Acid to Glycine at position 105 (E105G)
Ref Sequence ENSEMBL: ENSMUSP00000129719 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000049530] [ENSMUST00000164614] [ENSMUST00000229687]
AlphaFold Q67BJ4
Predicted Effect probably damaging
Transcript: ENSMUST00000049530
AA Change: E105G

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000057999
Gene: ENSMUSG00000047878
AA Change: E105G

DomainStartEndE-ValueType
transmembrane domain 31 53 N/A INTRINSIC
Pfam:Gly_transf_sug 97 221 2.6e-30 PFAM
Pfam:Gb3_synth 228 355 2.3e-51 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000164614
AA Change: E105G

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000129719
Gene: ENSMUSG00000047878
AA Change: E105G

DomainStartEndE-ValueType
transmembrane domain 31 53 N/A INTRINSIC
Pfam:Gly_transf_sug 97 221 2.6e-30 PFAM
Pfam:Gb3_synth 227 359 3.8e-52 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000229454
Predicted Effect probably benign
Transcript: ENSMUST00000229687
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: The protein encoded by this gene catalyzes the transfer of galactose to lactosylceramide to form globotriaosylceramide, which has been identified as the P(k) antigen of the P blood group system. The encoded protein, which is a type II membrane protein found in the Golgi, is also required for the synthesis of the bacterial verotoxins receptor. Alternative splicing results in multiple transcript variants.[provided by RefSeq, Jan 2010]
PHENOTYPE: Homozygous null mice display reduced sensitivity to verotoxin but do not display any gross morphological abnormalities. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 46 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Apc A G 18: 34,445,429 (GRCm39) D757G probably damaging Het
Arpc3 A T 5: 122,539,781 (GRCm39) I45F probably damaging Het
C3 C A 17: 57,529,249 (GRCm39) V597L probably damaging Het
Ccdc181 A G 1: 164,108,213 (GRCm39) N299D probably benign Het
Cdr1 T A X: 60,229,154 (GRCm39) Q4L unknown Het
Cep170 G A 1: 176,564,454 (GRCm39) S1464F probably damaging Het
Cfh A G 1: 140,030,557 (GRCm39) Y826H probably damaging Het
Chic2 A G 5: 75,171,954 (GRCm39) probably benign Het
Chrne T C 11: 70,509,338 (GRCm39) H81R probably benign Het
Clec4e A G 6: 123,260,599 (GRCm39) I153T probably benign Het
Col14a1 A T 15: 55,272,300 (GRCm39) D699V unknown Het
Cul3 T G 1: 80,259,144 (GRCm39) S379R probably damaging Het
Cyp3a11 T A 5: 145,797,189 (GRCm39) I397F possibly damaging Het
Dnah1 T C 14: 31,022,906 (GRCm39) K1077R probably benign Het
Dnajc18 A G 18: 35,813,972 (GRCm39) S266P probably benign Het
Dydc1 T G 14: 40,800,647 (GRCm39) L74R probably damaging Het
Echdc2 G T 4: 108,027,067 (GRCm39) A71S possibly damaging Het
Fer1l4 T A 2: 155,886,650 (GRCm39) D693V probably benign Het
Fscn3 T C 6: 28,430,604 (GRCm39) V258A probably benign Het
Herc2 T A 7: 55,869,516 (GRCm39) I4255N probably damaging Het
Il1rl2 A G 1: 40,382,200 (GRCm39) I171V possibly damaging Het
Ino80d G T 1: 63,097,467 (GRCm39) T809K probably damaging Het
Lama2 A T 10: 27,220,566 (GRCm39) L433* probably null Het
Nlrp9c A T 7: 26,084,533 (GRCm39) S349T probably benign Het
Parp11 T C 6: 127,466,981 (GRCm39) I124T possibly damaging Het
Parp8 A T 13: 116,999,605 (GRCm39) probably benign Het
Pgm1 T C 4: 99,827,236 (GRCm39) F379L probably damaging Het
Phf21b T C 15: 84,671,448 (GRCm39) H482R probably benign Het
Phka1 A C X: 101,584,716 (GRCm39) probably null Het
Plekhh1 T C 12: 79,100,430 (GRCm39) W133R probably damaging Het
Polr2a A C 11: 69,636,516 (GRCm39) L405* probably null Het
Prrg3 T A X: 71,010,108 (GRCm39) V3E probably damaging Het
Pth1r T C 9: 110,551,648 (GRCm39) K484E probably damaging Het
Rcbtb1 T C 14: 59,460,727 (GRCm39) L230P probably damaging Het
Slc51a G A 16: 32,297,568 (GRCm39) R110C probably damaging Het
Ssbp2 T C 13: 91,672,720 (GRCm39) Y27H probably damaging Het
Sult2a4 A G 7: 13,665,692 (GRCm39) V157A probably damaging Het
Tbx15 G A 3: 99,259,296 (GRCm39) S389N probably benign Het
Ttn T G 2: 76,671,424 (GRCm39) probably benign Het
Ube2n T C 10: 95,378,127 (GRCm39) probably benign Het
Wdr95 G A 5: 149,505,352 (GRCm39) probably null Het
Wsb2 T C 5: 117,514,620 (GRCm39) S298P possibly damaging Het
Zc3h7a T C 16: 10,974,166 (GRCm39) probably null Het
Zfat A G 15: 68,037,758 (GRCm39) C906R probably damaging Het
Zfp747 G A 7: 126,973,180 (GRCm39) T330I probably damaging Het
Zfp949 A G 9: 88,450,717 (GRCm39) R96G probably benign Het
Other mutations in A4galt
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01729:A4galt APN 15 83,112,526 (GRCm39) missense probably damaging 0.99
IGL01827:A4galt APN 15 83,112,135 (GRCm39) missense possibly damaging 0.52
IGL02745:A4galt APN 15 83,112,282 (GRCm39) missense probably benign
R0001:A4galt UTSW 15 83,112,490 (GRCm39) missense probably benign 0.27
R0440:A4galt UTSW 15 83,112,694 (GRCm39) missense probably damaging 0.98
R2763:A4galt UTSW 15 83,111,871 (GRCm39) missense probably benign 0.03
R4331:A4galt UTSW 15 83,111,880 (GRCm39) missense probably damaging 1.00
R4712:A4galt UTSW 15 83,111,810 (GRCm39) missense probably damaging 1.00
R4941:A4galt UTSW 15 83,112,529 (GRCm39) missense probably damaging 1.00
R6003:A4galt UTSW 15 83,112,312 (GRCm39) missense probably benign 0.05
R6247:A4galt UTSW 15 83,112,020 (GRCm39) missense probably damaging 0.99
R6607:A4galt UTSW 15 83,112,507 (GRCm39) missense possibly damaging 0.81
R7908:A4galt UTSW 15 83,112,577 (GRCm39) missense probably benign
R8479:A4galt UTSW 15 83,112,061 (GRCm39) missense probably benign
Posted On 2016-08-02