Incidental Mutation 'IGL03237:Nipal1'
ID414080
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Nipal1
Ensembl Gene ENSMUSG00000067219
Gene NameNIPA-like domain containing 1
Synonyms3830408G10Rik, Npal1
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.095) question?
Stock #IGL03237
Quality Score
Status
Chromosome5
Chromosomal Location72647795-72671078 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) C to T at 72666807 bp
ZygosityHeterozygous
Amino Acid Change Arginine to Cysteine at position 76 (R76C)
Ref Sequence ENSEMBL: ENSMUSP00000143667 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000087212] [ENSMUST00000197837]
Predicted Effect probably damaging
Transcript: ENSMUST00000087212
AA Change: R165C

PolyPhen 2 Score 0.987 (Sensitivity: 0.73; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000084462
Gene: ENSMUSG00000067219
AA Change: R165C

DomainStartEndE-ValueType
Pfam:Mg_trans_NIPA 66 360 6e-136 PFAM
Pfam:EamA 107 186 1.6e-11 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000197837
AA Change: R76C

PolyPhen 2 Score 0.989 (Sensitivity: 0.72; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000143667
Gene: ENSMUSG00000067219
AA Change: R76C

DomainStartEndE-ValueType
Pfam:Mg_trans_NIPA 3 96 2.1e-45 PFAM
Pfam:EamA 17 96 2.8e-10 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 44 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Acot12 A G 13: 91,781,269 Y405C probably benign Het
Adam19 A G 11: 46,137,556 K672R probably benign Het
Adamts7 C A 9: 90,188,664 P613T probably damaging Het
Adgrl1 G T 8: 83,929,683 probably null Het
Adrb1 A T 19: 56,723,368 N333Y probably damaging Het
AI314180 A T 4: 58,810,668 M1563K probably benign Het
Aqp7 C T 4: 41,034,884 V190M possibly damaging Het
Atg101 T C 15: 101,287,173 F59L probably damaging Het
Capn12 T C 7: 28,890,941 S638P probably damaging Het
Ccm2l T C 2: 153,066,002 probably benign Het
Cdc14a A T 3: 116,404,626 probably benign Het
Cdh7 A T 1: 110,138,307 K770N possibly damaging Het
Col23a1 A C 11: 51,567,919 E294D possibly damaging Het
Cped1 A T 6: 22,233,596 Y679F probably damaging Het
Ctu2 A G 8: 122,479,053 E180G probably benign Het
Cyp11b2 C T 15: 74,851,065 V495I probably benign Het
Efcab1 A G 16: 14,920,788 D161G probably damaging Het
Gabrg3 A T 7: 56,982,712 probably null Het
Hsd17b11 A G 5: 104,003,170 *233Q probably null Het
Klhl41 T C 2: 69,670,558 V121A possibly damaging Het
Kptn A T 7: 16,120,125 D56V probably damaging Het
L3mbtl4 T A 17: 68,777,861 I589N probably damaging Het
Lpl A T 8: 68,894,726 N177Y possibly damaging Het
Manba G A 3: 135,544,751 V380M probably damaging Het
Mecom A T 3: 29,956,499 probably benign Het
Mertk A G 2: 128,790,272 E707G probably damaging Het
Myo5a A T 9: 75,129,994 I160F probably damaging Het
Myo7a A T 7: 98,102,593 I81N probably damaging Het
Nelfcd G A 2: 174,426,832 A559T possibly damaging Het
Noc3l C T 19: 38,814,681 probably null Het
Nt5e A G 9: 88,355,734 D239G probably damaging Het
Olr1 A C 6: 129,502,154 W34G probably damaging Het
Plekhf1 A T 7: 38,221,375 N256K probably benign Het
Psen2 T C 1: 180,240,849 T80A possibly damaging Het
Psg27 A G 7: 18,560,492 I330T probably benign Het
Ranbp2 T C 10: 58,492,961 V2894A probably damaging Het
Sgcz A T 8: 37,563,178 D170E probably benign Het
Snrnp200 C T 2: 127,233,313 A1573V probably damaging Het
Steap3 C T 1: 120,243,790 G195D probably damaging Het
Tmem165 T A 5: 76,199,509 Y5* probably null Het
Tnpo1 C T 13: 98,863,840 E340K probably damaging Het
Vmn2r67 A T 7: 85,149,910 C530S probably damaging Het
Wdfy3 T A 5: 101,844,599 D3389V probably damaging Het
Zfp128 A C 7: 12,891,026 E440D probably benign Het
Other mutations in Nipal1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00425:Nipal1 APN 5 72658724 missense probably benign
IGL01894:Nipal1 APN 5 72663539 missense probably benign 0.02
IGL01962:Nipal1 APN 5 72668058 missense possibly damaging 0.50
IGL02145:Nipal1 APN 5 72666931 missense probably damaging 1.00
IGL02902:Nipal1 APN 5 72668062 missense possibly damaging 0.49
IGL02934:Nipal1 APN 5 72647907 missense probably damaging 1.00
IGL03024:Nipal1 APN 5 72663625 critical splice donor site probably null
R0848:Nipal1 UTSW 5 72667840 missense probably damaging 0.99
R1024:Nipal1 UTSW 5 72667991 frame shift probably null
R2106:Nipal1 UTSW 5 72663559 missense probably damaging 0.99
R2883:Nipal1 UTSW 5 72667730 missense probably damaging 1.00
R2932:Nipal1 UTSW 5 72667635 missense possibly damaging 0.46
R5364:Nipal1 UTSW 5 72667900 missense probably damaging 1.00
R6175:Nipal1 UTSW 5 72663555 missense probably damaging 1.00
R6523:Nipal1 UTSW 5 72667608 missense probably damaging 0.97
R7185:Nipal1 UTSW 5 72666855 missense probably damaging 0.98
R7436:Nipal1 UTSW 5 72667641 missense probably benign 0.00
RF011:Nipal1 UTSW 5 72666813 missense probably damaging 1.00
Posted On2016-08-02