Incidental Mutation 'IGL03248:Astn2'
ID414501
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Astn2
Ensembl Gene ENSMUSG00000028373
Gene Nameastrotactin 2
Synonyms1d8, Astnl
Accession Numbers

Genbank: NM_019514.3, NM_207109.2; Ensembl: ENSMUST00000068214,   ENSMUST00000084496

Is this an essential gene? Probably non essential (E-score: 0.116) question?
Stock #IGL03248
Quality Score
Status
Chromosome4
Chromosomal Location65380803-66404611 bp(-) (GRCm38)
Type of Mutationsplice site
DNA Base Change (assembly) A to G at 65746293 bp
ZygosityHeterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000081540 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000068214] [ENSMUST00000084496]
Predicted Effect probably benign
Transcript: ENSMUST00000068214
SMART Domains Protein: ENSMUSP00000065786
Gene: ENSMUSG00000028373

DomainStartEndE-ValueType
signal peptide 1 51 N/A INTRINSIC
low complexity region 87 127 N/A INTRINSIC
transmembrane domain 219 241 N/A INTRINSIC
low complexity region 303 312 N/A INTRINSIC
low complexity region 342 361 N/A INTRINSIC
low complexity region 393 404 N/A INTRINSIC
low complexity region 432 437 N/A INTRINSIC
transmembrane domain 443 465 N/A INTRINSIC
EGF_like 526 563 2.92e1 SMART
Blast:EGF_like 667 708 2e-18 BLAST
EGF_like 715 764 4.03e1 SMART
MACPF 864 1048 2.88e-55 SMART
FN3 1079 1191 2.41e0 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000084496
SMART Domains Protein: ENSMUSP00000081540
Gene: ENSMUSG00000028373

DomainStartEndE-ValueType
signal peptide 1 51 N/A INTRINSIC
low complexity region 87 127 N/A INTRINSIC
transmembrane domain 219 241 N/A INTRINSIC
low complexity region 303 312 N/A INTRINSIC
low complexity region 341 352 N/A INTRINSIC
low complexity region 380 385 N/A INTRINSIC
transmembrane domain 391 413 N/A INTRINSIC
EGF_like 474 511 2.92e1 SMART
Blast:EGF_like 615 656 2e-18 BLAST
EGF_like 663 712 4.03e1 SMART
MACPF 812 996 2.88e-55 SMART
FN3 1027 1139 2.41e0 SMART
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein that is expressed in the brain and may function in neuronal migration, based on functional studies of the related astrotactin 1 gene in human and mouse. A deletion at this locus has been associated with schizophrenia. Multiple transcript variants encoding different proteins have been found for this locus. [provided by RefSeq, May 2010]
Allele List at MGI

All alleles(1) : Gene trapped(1)

Other mutations in this stock
Total: 42 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abhd5 T C 9: 122,368,225 F116S probably damaging Het
Accsl A G 2: 93,862,784 probably benign Het
Adgrl2 T A 3: 148,817,400 E165V probably damaging Het
Alb T C 5: 90,461,714 probably benign Het
Ank2 C A 3: 126,955,870 E503D probably damaging Het
Arhgef10 T C 8: 14,928,847 V38A probably benign Het
Bahcc1 G A 11: 120,268,409 R154H probably damaging Het
Cep120 A G 18: 53,735,772 Y112H probably benign Het
Chrna5 C T 9: 55,004,639 T241I probably damaging Het
Clasp1 A G 1: 118,602,476 S1215G probably benign Het
Ddx21 C T 10: 62,591,990 R378Q possibly damaging Het
Dnah1 A T 14: 31,269,889 L3052Q probably damaging Het
Dyrk4 G T 6: 126,884,053 T445K probably benign Het
Ercc4 T C 16: 13,127,593 W291R probably damaging Het
Fam208a C T 14: 27,476,692 T1327I probably damaging Het
Flvcr1 A G 1: 191,025,742 W76R probably damaging Het
Frmd3 A G 4: 74,128,218 I132V possibly damaging Het
Gnb4 T C 3: 32,585,175 D323G probably damaging Het
Hnrnpc G A 14: 52,075,439 probably benign Het
Hnrnpl T C 7: 28,814,080 S202P probably benign Het
Hydin T A 8: 110,595,289 F4524L probably damaging Het
Iars2 A G 1: 185,291,432 probably benign Het
Ino80d A G 1: 63,068,182 probably null Het
Itga8 C A 2: 12,132,516 A13S probably benign Het
Man2a1 T C 17: 64,713,611 F794S probably damaging Het
Mpp7 T C 18: 7,403,269 D347G probably benign Het
Nup93 T C 8: 94,306,088 L411P probably damaging Het
Olfr564 C T 7: 102,803,639 Q54* probably null Het
Plin1 C T 7: 79,722,634 V86I probably damaging Het
Rgs6 A G 12: 83,052,550 probably benign Het
Shroom3 C T 5: 92,952,540 P1473S probably benign Het
Slc12a8 A G 16: 33,551,027 I178V probably damaging Het
Slc20a2 T A 8: 22,558,983 S219T probably benign Het
Tfeb T C 17: 47,786,995 M36T probably benign Het
Trim33 G A 3: 103,310,973 probably benign Het
Trnau1ap A G 4: 132,321,803 Y30H probably damaging Het
Tulp1 T C 17: 28,359,324 K276E possibly damaging Het
Uvssa T A 5: 33,391,816 I340N probably damaging Het
Vmn1r32 T A 6: 66,552,913 N293I possibly damaging Het
Xpc T C 6: 91,504,583 N250S probably damaging Het
Ybey T C 10: 76,468,327 I14V probably benign Het
Zfhx3 T C 8: 108,946,550 Y1411H probably damaging Het
Other mutations in Astn2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00964:Astn2 APN 4 66185187 missense unknown
IGL01657:Astn2 APN 4 65651949 missense probably damaging 0.99
IGL01747:Astn2 APN 4 65794618 missense probably benign 0.17
IGL02008:Astn2 APN 4 66059153 missense probably damaging 1.00
IGL02215:Astn2 APN 4 66266234 missense unknown
IGL02484:Astn2 APN 4 65992279 splice site probably benign
IGL02494:Astn2 APN 4 65992348 missense probably benign 0.23
IGL02792:Astn2 APN 4 65644821 missense probably benign 0.32
IGL03409:Astn2 APN 4 65435186 missense possibly damaging 0.46
B6584:Astn2 UTSW 4 65992387 missense probably damaging 0.99
R0015:Astn2 UTSW 4 66266382 critical splice acceptor site probably null
R0015:Astn2 UTSW 4 66266382 critical splice acceptor site probably null
R0092:Astn2 UTSW 4 66403982 missense unknown
R0245:Astn2 UTSW 4 65794558 missense probably damaging 0.99
R0528:Astn2 UTSW 4 65644882 splice site probably benign
R0586:Astn2 UTSW 4 66185142 missense unknown
R0652:Astn2 UTSW 4 65794558 missense probably damaging 0.99
R0880:Astn2 UTSW 4 65648330 missense probably damaging 0.99
R0931:Astn2 UTSW 4 65648293 missense probably damaging 0.99
R1353:Astn2 UTSW 4 66266335 missense unknown
R1700:Astn2 UTSW 4 65746354 nonsense probably null
R1934:Astn2 UTSW 4 65435189 missense probably damaging 0.99
R2017:Astn2 UTSW 4 65540941 missense probably damaging 0.99
R2101:Astn2 UTSW 4 65581686 nonsense probably null
R2158:Astn2 UTSW 4 66404254 missense unknown
R2907:Astn2 UTSW 4 65644856 missense possibly damaging 0.92
R2923:Astn2 UTSW 4 65913773 missense probably damaging 1.00
R2938:Astn2 UTSW 4 65992313 missense possibly damaging 0.92
R3033:Astn2 UTSW 4 65644706 missense probably damaging 1.00
R3933:Astn2 UTSW 4 66403955 missense unknown
R4151:Astn2 UTSW 4 65729320 critical splice donor site probably null
R4230:Astn2 UTSW 4 65911682 missense probably damaging 0.99
R4497:Astn2 UTSW 4 66119063 intron probably benign
R4717:Astn2 UTSW 4 65644754 missense possibly damaging 0.86
R4844:Astn2 UTSW 4 65644730 missense possibly damaging 0.90
R4928:Astn2 UTSW 4 65729407 missense probably damaging 0.98
R5374:Astn2 UTSW 4 65397005 missense probably damaging 0.96
R5442:Astn2 UTSW 4 65581786 missense possibly damaging 0.86
R5694:Astn2 UTSW 4 65950138 missense probably damaging 1.00
R5756:Astn2 UTSW 4 66119188 intron probably benign
R5763:Astn2 UTSW 4 65729331 missense probably benign 0.14
R6089:Astn2 UTSW 4 65794573 missense probably damaging 0.96
R6990:Astn2 UTSW 4 65992303 missense possibly damaging 0.82
R7304:Astn2 UTSW 4 66185375 missense unknown
R7325:Astn2 UTSW 4 65542669 missense probably benign 0.33
R7356:Astn2 UTSW 4 66185266 missense unknown
R7414:Astn2 UTSW 4 65540956 missense possibly damaging 0.85
R7755:Astn2 UTSW 4 65794558 missense probably damaging 0.99
R7887:Astn2 UTSW 4 65644866 missense possibly damaging 0.51
R7970:Astn2 UTSW 4 65644866 missense possibly damaging 0.51
R8027:Astn2 UTSW 4 65540971 missense possibly damaging 0.86
R8046:Astn2 UTSW 4 66266350 nonsense probably null
Posted On2016-08-02