Incidental Mutation 'IGL03263:Clca4a'
ID 414962
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Clca4a
Ensembl Gene ENSMUSG00000068547
Gene Name chloride channel accessory 4A
Synonyms Clca6, 9130020L07Rik
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.272) question?
Stock # IGL03263
Quality Score
Status
Chromosome 3
Chromosomal Location 144952480-144975045 bp(-) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) T to A at 144966431 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Glutamic Acid to Valine at position 250 (E250V)
Ref Sequence ENSEMBL: ENSMUSP00000029923 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000029923]
AlphaFold no structure available at present
Predicted Effect probably damaging
Transcript: ENSMUST00000029923
AA Change: E250V

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000029923
Gene: ENSMUSG00000068547
AA Change: E250V

DomainStartEndE-ValueType
signal peptide 1 23 N/A INTRINSIC
low complexity region 286 300 N/A INTRINSIC
VWA 306 480 5.94e-16 SMART
Blast:VWA 513 552 7e-18 BLAST
Blast:FN3 757 838 8e-33 BLAST
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 48 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700123K08Rik T A 5: 138,564,237 I81F probably damaging Het
Acacb C T 5: 114,213,693 H1164Y probably damaging Het
Adamts5 A T 16: 85,869,942 V554E probably damaging Het
Asns G A 6: 7,689,404 R33C probably benign Het
BC051076 T G 5: 87,964,118 noncoding transcript Het
Bcas3 C T 11: 85,822,122 probably benign Het
Bpifb1 A G 2: 154,215,306 M395V probably benign Het
Cdcp1 C A 9: 123,180,087 V509L probably benign Het
Cdhr2 A G 13: 54,718,113 T277A possibly damaging Het
Ces1d C A 8: 93,169,718 probably null Het
Cplx4 T C 18: 65,967,488 D79G probably benign Het
Dcaf11 A G 14: 55,565,492 D246G probably damaging Het
Dnah2 A T 11: 69,529,381 probably null Het
Dock3 A T 9: 106,930,131 probably benign Het
Fam170a T C 18: 50,280,521 probably benign Het
Fgfr2 T A 7: 130,180,419 M423L probably benign Het
Gabra2 A G 5: 70,973,493 F331L probably damaging Het
Galnt18 C T 7: 111,520,114 R400Q probably damaging Het
Gm884 A G 11: 103,613,699 V2481A possibly damaging Het
H2-M11 A T 17: 36,548,913 Q266L probably damaging Het
Igf2bp1 A T 11: 95,966,673 V502D probably damaging Het
Ik A G 18: 36,748,646 N111S probably damaging Het
Intu T A 3: 40,672,597 Y269* probably null Het
Krt82 T C 15: 101,541,872 Y463C probably benign Het
Lrig1 A G 6: 94,611,647 M507T probably benign Het
Mag T G 7: 30,899,528 probably null Het
Map7 T A 10: 20,245,322 Y121* probably null Het
March6 A G 15: 31,486,362 I349T probably benign Het
Mas1 A G 17: 12,841,564 V324A possibly damaging Het
Nckap1l T C 15: 103,464,405 W259R probably damaging Het
Nhsl1 T A 10: 18,498,079 Y164* probably null Het
Olfr678 T A 7: 105,070,002 H178Q probably damaging Het
Olfr885 A T 9: 38,061,713 Y131F probably damaging Het
Pcdhb2 A G 18: 37,296,006 D344G probably damaging Het
Pclo T C 5: 14,681,810 V3442A unknown Het
Polr3c C T 3: 96,714,251 probably benign Het
Ppp2r2d C T 7: 138,872,922 R11* probably null Het
Ptgfr T A 3: 151,835,863 M3L probably benign Het
Rfx6 A G 10: 51,725,807 S741G probably benign Het
Rif1 T C 2: 52,090,261 V490A probably damaging Het
Samd7 T A 3: 30,762,153 H349Q probably damaging Het
Sh3pxd2a T C 19: 47,314,043 N199S probably damaging Het
Spef2 T A 15: 9,667,219 K794N possibly damaging Het
Spta1 C T 1: 174,213,918 A1316V probably damaging Het
Vwa7 A G 17: 35,021,599 E410G probably benign Het
Washc2 T A 6: 116,238,123 probably benign Het
Wdr72 A C 9: 74,157,429 Y581S probably damaging Het
Zdhhc17 T C 10: 110,961,016 D298G probably damaging Het
Other mutations in Clca4a
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00906:Clca4a APN 3 144954939 missense probably damaging 0.99
IGL01139:Clca4a APN 3 144966269 missense probably damaging 0.99
IGL01371:Clca4a APN 3 144960672 missense probably damaging 1.00
IGL01609:Clca4a APN 3 144953780 missense probably damaging 1.00
IGL01998:Clca4a APN 3 144958126 missense probably damaging 0.98
IGL02172:Clca4a APN 3 144970394 nonsense probably null
IGL02217:Clca4a APN 3 144961996 missense possibly damaging 0.61
IGL02514:Clca4a APN 3 144955071 missense probably damaging 1.00
IGL02975:Clca4a APN 3 144963769 missense possibly damaging 0.90
IGL03025:Clca4a APN 3 144957318 missense probably benign 0.07
IGL03049:Clca4a APN 3 144970755 splice site probably benign
IGL03058:Clca4a APN 3 144961834 splice site probably benign
IGL03259:Clca4a APN 3 144958080 missense probably damaging 1.00
IGL03334:Clca4a APN 3 144953866 missense probably benign 0.28
PIT4142001:Clca4a UTSW 3 144968311 missense probably damaging 1.00
R0201:Clca4a UTSW 3 144960717 missense probably benign 0.00
R0316:Clca4a UTSW 3 144953764 missense probably damaging 1.00
R0524:Clca4a UTSW 3 144969393 missense probably damaging 1.00
R0680:Clca4a UTSW 3 144969367 missense probably damaging 1.00
R0688:Clca4a UTSW 3 144961974 missense probably damaging 1.00
R1137:Clca4a UTSW 3 144970685 missense probably damaging 1.00
R1568:Clca4a UTSW 3 144952929 missense probably benign 0.00
R1719:Clca4a UTSW 3 144963755 missense probably damaging 1.00
R2055:Clca4a UTSW 3 144970728 missense probably damaging 1.00
R3078:Clca4a UTSW 3 144968253 missense probably damaging 0.99
R3080:Clca4a UTSW 3 144963790 missense probably damaging 1.00
R3789:Clca4a UTSW 3 144974956 missense probably damaging 1.00
R3881:Clca4a UTSW 3 144957318 missense probably benign 0.07
R4133:Clca4a UTSW 3 144969352 missense probably benign 0.07
R4402:Clca4a UTSW 3 144952848 missense probably benign 0.08
R4455:Clca4a UTSW 3 144957259 missense probably damaging 1.00
R4577:Clca4a UTSW 3 144954969 missense probably damaging 0.97
R4683:Clca4a UTSW 3 144954940 missense probably damaging 1.00
R5135:Clca4a UTSW 3 144954946 missense probably damaging 1.00
R5267:Clca4a UTSW 3 144953812 missense probably damaging 1.00
R5345:Clca4a UTSW 3 144970461 missense probably damaging 1.00
R6311:Clca4a UTSW 3 144966413 missense probably damaging 0.99
R6492:Clca4a UTSW 3 144957298 missense probably benign 0.00
R6493:Clca4a UTSW 3 144957298 missense probably benign 0.00
R6494:Clca4a UTSW 3 144957298 missense probably benign 0.00
R6861:Clca4a UTSW 3 144970655 missense probably benign
R7102:Clca4a UTSW 3 144961909 missense probably benign 0.01
R7133:Clca4a UTSW 3 144961890 nonsense probably null
R7171:Clca4a UTSW 3 144958173 missense probably benign
R7516:Clca4a UTSW 3 144966248 missense probably damaging 1.00
R7642:Clca4a UTSW 3 144953751 missense probably benign 0.11
R7731:Clca4a UTSW 3 144952785 missense probably benign 0.02
R7787:Clca4a UTSW 3 144953833 missense probably benign
R7820:Clca4a UTSW 3 144960671 missense probably damaging 1.00
R7895:Clca4a UTSW 3 144968405 missense probably benign 0.19
R7991:Clca4a UTSW 3 144952739 missense possibly damaging 0.75
R8240:Clca4a UTSW 3 144970727 missense probably damaging 1.00
R9308:Clca4a UTSW 3 144970422 missense probably damaging 1.00
R9373:Clca4a UTSW 3 144966372 missense possibly damaging 0.66
R9488:Clca4a UTSW 3 144953771 missense probably damaging 1.00
R9772:Clca4a UTSW 3 144970661 missense probably damaging 1.00
R9781:Clca4a UTSW 3 144961952 missense probably benign 0.01
Posted On 2016-08-02