Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL00534:Esd'

4155

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Esd

Ensembl Gene

ENSMUSG00000021996

Gene Name

esterase D/formylglutathione hydrolase

Synonyms

Es10, Esd, Es-10

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.212) question?

Stock #

IGL00534

Quality Score

Status

Chromosome

Chromosomal Location

74969737-74988205 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 74975901 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 34 (V34A)

Ref Sequence

ENSEMBL: ENSMUSP00000134932 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000022573] [ENSMUST00000175712] [ENSMUST00000175887] [ENSMUST00000176957] [ENSMUST00000177181] [ENSMUST00000177283] [ENSMUST00000177137]

AlphaFold

Q9R0P3

Predicted Effect

probably damaging
Transcript: ENSMUST00000022573
AA Change: V34A

PolyPhen 2 Score 0.962 (Sensitivity: 0.78; Specificity: 0.95)

SMART Domains

Protein: ENSMUSP00000022573
Gene: ENSMUSG00000021996
AA Change: V34A

Domain	Start	End	E-Value	Type
Pfam:Esterase	23	275	8.1e-74	PFAM
Pfam:Chlorophyllase2	29	184	2.7e-8	PFAM
Pfam:Esterase_phd	30	231	1e-7	PFAM
Pfam:Abhydrolase_5	48	261	4.6e-9	PFAM
Pfam:Peptidase_S9	102	282	2.2e-7	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000175712
AA Change: V34A

PolyPhen 2 Score 0.985 (Sensitivity: 0.74; Specificity: 0.96)

SMART Domains

Protein: ENSMUSP00000134932
Gene: ENSMUSG00000021996
AA Change: V34A

Domain	Start	End	E-Value	Type
Pfam:Esterase	23	131	4.5e-30	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000175887
AA Change: V34A

PolyPhen 2 Score 0.836 (Sensitivity: 0.84; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000135244
Gene: ENSMUSG00000021996
AA Change: V34A

Domain	Start	End	E-Value	Type
Pfam:Esterase	23	242	1.3e-57	PFAM
Pfam:Chlorophyllase2	29	186	2.6e-8	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000176188

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000176484

Predicted Effect

probably benign
Transcript: ENSMUST00000176726

Predicted Effect

possibly damaging
Transcript: ENSMUST00000176957
AA Change: V47A

PolyPhen 2 Score 0.686 (Sensitivity: 0.86; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000135394
Gene: ENSMUSG00000021996
AA Change: V47A

Domain	Start	End	E-Value	Type
Pfam:AXE1	26	198	1e-7	PFAM
Pfam:Esterase	36	288	6.6e-74	PFAM
Pfam:Abhydrolase_5	61	274	7.1e-9	PFAM
Pfam:Peptidase_S9	116	295	2.4e-7	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000177181
AA Change: V34A

PolyPhen 2 Score 0.874 (Sensitivity: 0.83; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000135035
Gene: ENSMUSG00000021996
AA Change: V34A

Domain	Start	End	E-Value	Type
Pfam:Esterase	23	261	2e-68	PFAM
Pfam:Chlorophyllase2	29	184	2.3e-8	PFAM
Pfam:Esterase_phd	30	231	8.4e-8	PFAM
Pfam:Abhydrolase_5	48	248	5.6e-9	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000177283
AA Change: V34A

PolyPhen 2 Score 0.874 (Sensitivity: 0.83; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000135063
Gene: ENSMUSG00000021996
AA Change: V34A

Domain	Start	End	E-Value	Type
Pfam:AXE1	16	185	1.1e-7	PFAM
Pfam:Esterase	23	247	1e-67	PFAM
Pfam:Chlorophyllase2	29	184	1.9e-8	PFAM
Pfam:Esterase_phd	30	231	2.5e-8	PFAM
Pfam:Abhydrolase_5	48	239	5.9e-9	PFAM

Predicted Effect

possibly damaging
Transcript: ENSMUST00000177137
AA Change: V34A

PolyPhen 2 Score 0.769 (Sensitivity: 0.85; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000135818
Gene: ENSMUSG00000021996
AA Change: V34A

Domain	Start	End	E-Value	Type
Pfam:Esterase	23	259	1.4e-68	PFAM
Pfam:Chlorophyllase2	29	184	2.2e-8	PFAM
Pfam:Esterase_phd	30	231	7.9e-8	PFAM
Pfam:Abhydrolase_5	48	247	5.3e-9	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000177445

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 19 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Arsj	G	T	3: 126,158,594 (GRCm39)	A58S	probably benign	Het
Dchs1	A	T	7: 105,407,150 (GRCm39)	S2148T	probably benign	Het
Esyt1	A	G	10: 128,351,553 (GRCm39)		probably null	Het
Glce	G	A	9: 61,967,765 (GRCm39)	T462M	probably damaging	Het
Gm382	A	G	X: 125,971,238 (GRCm39)	Y1141C	probably damaging	Het
H2-T5	A	T	17: 36,479,021 (GRCm39)	I76N	probably damaging	Het
Hsd3b1	T	C	3: 98,760,562 (GRCm39)	E143G	probably damaging	Het
Igf2r	T	C	17: 12,958,215 (GRCm39)	T153A	probably damaging	Het
Irs1	A	G	1: 82,266,192 (GRCm39)	S675P	probably benign	Het
Lars1	A	T	18: 42,362,719 (GRCm39)	H573Q	probably damaging	Het
Lman2	T	C	13: 55,499,055 (GRCm39)	E237G	possibly damaging	Het
Map2k4	C	A	11: 65,610,305 (GRCm39)		probably benign	Het
Pde6b	T	C	5: 108,574,437 (GRCm39)		probably benign	Het
Pomgnt1	T	C	4: 116,009,958 (GRCm39)	L136P	probably damaging	Het
Ralgapb	T	A	2: 158,272,420 (GRCm39)	M158K	possibly damaging	Het
Serpina3n	A	G	12: 104,378,604 (GRCm39)	E308G	probably benign	Het
Sgo2a	T	A	1: 58,055,503 (GRCm39)	N562K	probably damaging	Het
Sipa1l2	T	C	8: 126,218,545 (GRCm39)	Y264C	probably damaging	Het
Snx27	G	A	3: 94,469,279 (GRCm39)	H21Y	probably damaging	Het

Other mutations in Esd

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00324:Esd	APN	14	74,973,467 (GRCm39)	missense	probably damaging	1.00
IGL00904:Esd	APN	14	74,987,128 (GRCm39)	makesense	probably null
IGL01645:Esd	APN	14	74,987,159 (GRCm39)	missense	probably benign	0.00
IGL03117:Esd	APN	14	74,978,686 (GRCm39)	missense	probably damaging	1.00
R0766:Esd	UTSW	14	74,979,561 (GRCm39)	missense	probably damaging	1.00
R0939:Esd	UTSW	14	74,973,467 (GRCm39)	missense	probably damaging	1.00
R1862:Esd	UTSW	14	74,979,514 (GRCm39)	missense	probably damaging	1.00
R1892:Esd	UTSW	14	74,987,113 (GRCm39)	missense	probably damaging	0.96
R3922:Esd	UTSW	14	74,980,667 (GRCm39)	missense	probably benign	0.00
R4580:Esd	UTSW	14	74,979,517 (GRCm39)	missense	possibly damaging	0.55
R4830:Esd	UTSW	14	74,978,600 (GRCm39)	missense	probably damaging	1.00
R4969:Esd	UTSW	14	74,982,153 (GRCm39)	missense	possibly damaging	0.76
R5211:Esd	UTSW	14	74,978,632 (GRCm39)	missense	probably damaging	1.00
R5335:Esd	UTSW	14	74,979,553 (GRCm39)	missense	probably damaging	0.99
R5810:Esd	UTSW	14	74,983,051 (GRCm39)	missense	probably damaging	1.00
R7024:Esd	UTSW	14	74,982,102 (GRCm39)	missense	probably damaging	1.00
R7759:Esd	UTSW	14	74,983,007 (GRCm39)	nonsense	probably null
R8673:Esd	UTSW	14	74,969,952 (GRCm39)	missense	probably benign	0.15
R9001:Esd	UTSW	14	74,983,123 (GRCm39)	missense	probably benign	0.00

Posted On

2012-04-20