Incidental Mutation 'IGL03289:Vnn3'
ID |
415840 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Vnn3
|
Ensembl Gene |
ENSMUSG00000020010 |
Gene Name |
vanin 3 |
Synonyms |
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.053)
|
Stock # |
IGL03289
|
Quality Score |
|
Status
|
|
Chromosome |
10 |
Chromosomal Location |
23727360-23745741 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to T
at 23741735 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Serine to Cysteine
at position 347
(S347C)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000020190
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000020190]
|
AlphaFold |
Q9QZ25 |
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000020190
AA Change: S347C
PolyPhen 2
Score 0.923 (Sensitivity: 0.81; Specificity: 0.94)
|
SMART Domains |
Protein: ENSMUSP00000020190 Gene: ENSMUSG00000020010 AA Change: S347C
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
22 |
N/A |
INTRINSIC |
Pfam:CN_hydrolase
|
51 |
296 |
6.9e-19 |
PFAM |
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 29 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Akap10 |
A |
G |
11: 61,768,794 (GRCm39) |
|
probably benign |
Het |
Akap9 |
A |
G |
5: 4,127,261 (GRCm39) |
Y3703C |
probably damaging |
Het |
Ankk1 |
A |
G |
9: 49,326,995 (GRCm39) |
V728A |
probably benign |
Het |
B3galt2 |
T |
C |
1: 143,523,042 (GRCm39) |
Y393H |
probably damaging |
Het |
Clcn4 |
T |
A |
7: 7,287,257 (GRCm39) |
I664F |
probably damaging |
Het |
Clec2e |
A |
T |
6: 129,075,418 (GRCm39) |
I41N |
probably damaging |
Het |
Col2a1 |
A |
T |
15: 97,878,762 (GRCm39) |
N845K |
unknown |
Het |
Cubn |
T |
G |
2: 13,431,778 (GRCm39) |
I1272L |
probably benign |
Het |
Dnajc5 |
T |
C |
2: 181,189,260 (GRCm39) |
Y79H |
probably damaging |
Het |
Eml6 |
G |
T |
11: 29,745,328 (GRCm39) |
A1006E |
possibly damaging |
Het |
Igsf5 |
A |
T |
16: 96,326,632 (GRCm39) |
D271V |
possibly damaging |
Het |
Kalrn |
G |
A |
16: 34,205,667 (GRCm39) |
A70V |
possibly damaging |
Het |
Kcnn2 |
A |
T |
18: 45,810,111 (GRCm39) |
K309N |
probably damaging |
Het |
Lrch4 |
T |
C |
5: 137,631,839 (GRCm39) |
S22P |
probably damaging |
Het |
Mcpt2 |
A |
T |
14: 56,281,794 (GRCm39) |
I215F |
probably damaging |
Het |
Mrc1 |
T |
C |
2: 14,313,634 (GRCm39) |
|
probably null |
Het |
Nelfcd |
G |
A |
2: 174,268,625 (GRCm39) |
A559T |
possibly damaging |
Het |
Or1l4b |
C |
T |
2: 37,036,590 (GRCm39) |
A122V |
probably damaging |
Het |
Osbp2 |
A |
G |
11: 3,813,380 (GRCm39) |
V163A |
probably benign |
Het |
Pla2g6 |
G |
A |
15: 79,201,985 (GRCm39) |
P62L |
probably damaging |
Het |
Scart1 |
T |
C |
7: 139,808,973 (GRCm39) |
|
probably null |
Het |
Senp1 |
G |
T |
15: 97,982,926 (GRCm39) |
H20Q |
probably damaging |
Het |
Slc16a6 |
A |
G |
11: 109,354,325 (GRCm39) |
Y31H |
probably damaging |
Het |
Thbs2 |
T |
A |
17: 14,910,384 (GRCm39) |
N72Y |
probably benign |
Het |
Usp34 |
T |
A |
11: 23,343,818 (GRCm39) |
S1366T |
possibly damaging |
Het |
Vmn1r216 |
T |
A |
13: 23,284,182 (GRCm39) |
D288E |
possibly damaging |
Het |
Vmn2r11 |
T |
C |
5: 109,196,788 (GRCm39) |
|
probably benign |
Het |
Yme1l1 |
T |
C |
2: 23,050,280 (GRCm39) |
V37A |
probably benign |
Het |
Zfp597 |
A |
T |
16: 3,683,786 (GRCm39) |
D323E |
possibly damaging |
Het |
|
Other mutations in Vnn3 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00675:Vnn3
|
APN |
10 |
23,743,066 (GRCm39) |
missense |
possibly damaging |
0.77 |
IGL01300:Vnn3
|
APN |
10 |
23,740,263 (GRCm39) |
missense |
possibly damaging |
0.87 |
IGL01349:Vnn3
|
APN |
10 |
23,727,814 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02491:Vnn3
|
APN |
10 |
23,741,816 (GRCm39) |
missense |
probably benign |
0.11 |
IGL03256:Vnn3
|
APN |
10 |
23,727,698 (GRCm39) |
splice site |
probably benign |
|
IGL02799:Vnn3
|
UTSW |
10 |
23,727,869 (GRCm39) |
missense |
possibly damaging |
0.64 |
R0599:Vnn3
|
UTSW |
10 |
23,741,603 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1703:Vnn3
|
UTSW |
10 |
23,741,828 (GRCm39) |
missense |
probably benign |
|
R1753:Vnn3
|
UTSW |
10 |
23,741,718 (GRCm39) |
missense |
probably benign |
0.27 |
R2119:Vnn3
|
UTSW |
10 |
23,740,311 (GRCm39) |
missense |
probably damaging |
1.00 |
R2288:Vnn3
|
UTSW |
10 |
23,740,354 (GRCm39) |
missense |
probably benign |
0.03 |
R4255:Vnn3
|
UTSW |
10 |
23,741,720 (GRCm39) |
missense |
probably benign |
0.18 |
R4458:Vnn3
|
UTSW |
10 |
23,741,567 (GRCm39) |
missense |
probably benign |
0.23 |
R4518:Vnn3
|
UTSW |
10 |
23,743,124 (GRCm39) |
missense |
possibly damaging |
0.77 |
R4545:Vnn3
|
UTSW |
10 |
23,732,224 (GRCm39) |
missense |
probably benign |
0.00 |
R4723:Vnn3
|
UTSW |
10 |
23,727,589 (GRCm39) |
missense |
possibly damaging |
0.88 |
R4791:Vnn3
|
UTSW |
10 |
23,740,519 (GRCm39) |
missense |
probably benign |
|
R4921:Vnn3
|
UTSW |
10 |
23,740,473 (GRCm39) |
missense |
probably benign |
0.01 |
R5152:Vnn3
|
UTSW |
10 |
23,740,237 (GRCm39) |
missense |
probably benign |
0.01 |
R5390:Vnn3
|
UTSW |
10 |
23,727,483 (GRCm39) |
start codon destroyed |
probably null |
1.00 |
R5545:Vnn3
|
UTSW |
10 |
23,742,992 (GRCm39) |
missense |
probably benign |
0.00 |
R6197:Vnn3
|
UTSW |
10 |
23,732,187 (GRCm39) |
missense |
probably damaging |
1.00 |
R6751:Vnn3
|
UTSW |
10 |
23,745,523 (GRCm39) |
missense |
probably benign |
0.00 |
R6846:Vnn3
|
UTSW |
10 |
23,727,620 (GRCm39) |
missense |
probably benign |
|
R6917:Vnn3
|
UTSW |
10 |
23,741,832 (GRCm39) |
missense |
possibly damaging |
0.50 |
R7073:Vnn3
|
UTSW |
10 |
23,740,311 (GRCm39) |
missense |
probably damaging |
1.00 |
R7100:Vnn3
|
UTSW |
10 |
23,741,840 (GRCm39) |
missense |
probably damaging |
1.00 |
R7152:Vnn3
|
UTSW |
10 |
23,727,513 (GRCm39) |
missense |
possibly damaging |
0.88 |
R7336:Vnn3
|
UTSW |
10 |
23,727,806 (GRCm39) |
missense |
probably benign |
0.42 |
R7421:Vnn3
|
UTSW |
10 |
23,741,666 (GRCm39) |
missense |
probably benign |
0.06 |
R7875:Vnn3
|
UTSW |
10 |
23,743,146 (GRCm39) |
missense |
possibly damaging |
0.80 |
R8353:Vnn3
|
UTSW |
10 |
23,745,443 (GRCm39) |
missense |
probably benign |
0.01 |
R8453:Vnn3
|
UTSW |
10 |
23,745,443 (GRCm39) |
missense |
probably benign |
0.01 |
R8465:Vnn3
|
UTSW |
10 |
23,741,780 (GRCm39) |
missense |
possibly damaging |
0.67 |
R9105:Vnn3
|
UTSW |
10 |
23,740,461 (GRCm39) |
missense |
probably damaging |
1.00 |
R9261:Vnn3
|
UTSW |
10 |
23,741,607 (GRCm39) |
missense |
probably damaging |
0.97 |
R9441:Vnn3
|
UTSW |
10 |
23,740,498 (GRCm39) |
missense |
possibly damaging |
0.94 |
R9718:Vnn3
|
UTSW |
10 |
23,745,454 (GRCm39) |
nonsense |
probably null |
|
R9737:Vnn3
|
UTSW |
10 |
23,741,813 (GRCm39) |
missense |
probably benign |
0.02 |
|
Posted On |
2016-08-02 |