Incidental Mutation 'IGL03297:Vmn2r78'
ID 416109
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Vmn2r78
Ensembl Gene ENSMUSG00000091962
Gene Name vomeronasal 2, receptor 78
Synonyms
Accession Numbers
Essential gene? Probably non essential (E-score: 0.071) question?
Stock # IGL03297
Quality Score
Status
Chromosome 7
Chromosomal Location 86564557-86604385 bp(+) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) T to A at 86569969 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Cysteine to Stop codon at position 162 (C162*)
Ref Sequence ENSEMBL: ENSMUSP00000126698 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000170835]
AlphaFold K7N6U5
Predicted Effect probably null
Transcript: ENSMUST00000170835
AA Change: C162*
SMART Domains Protein: ENSMUSP00000126698
Gene: ENSMUSG00000091962
AA Change: C162*

DomainStartEndE-ValueType
signal peptide 1 21 N/A INTRINSIC
Pfam:ANF_receptor 75 464 5.9e-31 PFAM
Pfam:NCD3G 507 559 8.1e-21 PFAM
Pfam:7tm_3 592 827 1e-52 PFAM
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 36 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adamtsl1 G A 4: 86,341,663 (GRCm39) G1624S probably damaging Het
Adhfe1 A G 1: 9,620,173 (GRCm39) probably benign Het
Ano6 C A 15: 95,860,158 (GRCm39) T760N probably damaging Het
Camsap2 T C 1: 136,225,539 (GRCm39) M196V probably benign Het
Cd209d T C 8: 3,928,476 (GRCm39) D3G possibly damaging Het
Cdh5 T A 8: 104,854,831 (GRCm39) F253Y probably damaging Het
Cnot10 T C 9: 114,427,784 (GRCm39) E610G possibly damaging Het
Cnot4 T C 6: 35,001,158 (GRCm39) N579S probably benign Het
Csmd1 G T 8: 16,059,432 (GRCm39) S2101* probably null Het
Dgkq C A 5: 108,798,140 (GRCm39) R706L probably damaging Het
Gm5422 T C 10: 31,125,727 (GRCm39) noncoding transcript Het
Gpr34 A G X: 13,505,681 (GRCm39) Y70C probably damaging Het
Herc6 T A 6: 57,639,374 (GRCm39) L914Q probably benign Het
Ifitm6 T C 7: 140,595,948 (GRCm39) Y115C probably damaging Het
Iqcg G T 16: 32,856,002 (GRCm39) probably benign Het
Myo15a A G 11: 60,369,967 (GRCm39) D909G probably damaging Het
Nefl A G 14: 68,321,673 (GRCm39) T88A possibly damaging Het
Nfatc2 T A 2: 168,378,138 (GRCm39) N509I probably damaging Het
Nkd1 T C 8: 89,300,902 (GRCm39) probably benign Het
Npas2 T C 1: 39,331,771 (GRCm39) V62A possibly damaging Het
Oas2 T G 5: 120,873,150 (GRCm39) D635A possibly damaging Het
Obscn C T 11: 58,951,712 (GRCm39) V4014M possibly damaging Het
Ogfr C A 2: 180,236,200 (GRCm39) H262N possibly damaging Het
Or10aa1 T G 1: 173,869,683 (GRCm39) S56A probably benign Het
Or8b49 A T 9: 38,505,821 (GRCm39) L101F probably benign Het
Pa2g4 T C 10: 128,399,105 (GRCm39) D104G probably damaging Het
Parp11 T C 6: 127,467,045 (GRCm39) probably benign Het
Ppp2r5a C T 1: 191,086,959 (GRCm39) V360I probably benign Het
Ptpn13 A T 5: 103,688,943 (GRCm39) K912I probably benign Het
Sec16a A G 2: 26,329,202 (GRCm39) S938P probably benign Het
Slc15a1 A C 14: 121,724,096 (GRCm39) I170S probably damaging Het
Smchd1 T C 17: 71,656,695 (GRCm39) N1924S probably benign Het
Sprr4 G A 3: 92,407,731 (GRCm39) P24S unknown Het
Trim30b A T 7: 104,015,102 (GRCm39) N95K probably benign Het
Tyw1 C T 5: 130,369,575 (GRCm39) A687V probably damaging Het
Vmn2r14 T A 5: 109,363,973 (GRCm39) I648F probably damaging Het
Other mutations in Vmn2r78
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01302:Vmn2r78 APN 7 86,564,569 (GRCm39) missense unknown
IGL01473:Vmn2r78 APN 7 86,569,520 (GRCm39) missense possibly damaging 0.61
IGL01767:Vmn2r78 APN 7 86,603,643 (GRCm39) missense probably benign 0.28
IGL02322:Vmn2r78 APN 7 86,570,687 (GRCm39) missense probably damaging 0.96
IGL02537:Vmn2r78 APN 7 86,603,496 (GRCm39) missense probably damaging 0.99
ANU74:Vmn2r78 UTSW 7 86,570,273 (GRCm39) missense possibly damaging 0.62
R0035:Vmn2r78 UTSW 7 86,569,413 (GRCm39) missense probably benign 0.22
R0081:Vmn2r78 UTSW 7 86,572,235 (GRCm39) missense probably benign 0.35
R0401:Vmn2r78 UTSW 7 86,570,519 (GRCm39) missense probably benign 0.04
R0751:Vmn2r78 UTSW 7 86,603,588 (GRCm39) missense possibly damaging 0.77
R1341:Vmn2r78 UTSW 7 86,571,477 (GRCm39) missense possibly damaging 0.71
R1386:Vmn2r78 UTSW 7 86,564,615 (GRCm39) missense unknown
R1526:Vmn2r78 UTSW 7 86,571,465 (GRCm39) splice site probably null
R1712:Vmn2r78 UTSW 7 86,604,132 (GRCm39) missense probably damaging 1.00
R1739:Vmn2r78 UTSW 7 86,569,997 (GRCm39) missense probably benign
R1812:Vmn2r78 UTSW 7 86,569,995 (GRCm39) missense probably benign 0.38
R2011:Vmn2r78 UTSW 7 86,604,287 (GRCm39) missense possibly damaging 0.52
R2144:Vmn2r78 UTSW 7 86,603,690 (GRCm39) missense probably damaging 1.00
R2197:Vmn2r78 UTSW 7 86,570,535 (GRCm39) missense probably damaging 0.96
R2291:Vmn2r78 UTSW 7 86,569,362 (GRCm39) missense probably damaging 1.00
R2409:Vmn2r78 UTSW 7 86,569,953 (GRCm39) splice site probably benign
R3023:Vmn2r78 UTSW 7 86,604,174 (GRCm39) missense probably damaging 1.00
R4486:Vmn2r78 UTSW 7 86,569,959 (GRCm39) critical splice acceptor site probably null
R4512:Vmn2r78 UTSW 7 86,569,452 (GRCm39) missense probably benign 0.00
R4515:Vmn2r78 UTSW 7 86,603,466 (GRCm39) missense probably damaging 0.99
R4544:Vmn2r78 UTSW 7 86,570,399 (GRCm39) missense probably benign
R4546:Vmn2r78 UTSW 7 86,603,811 (GRCm39) missense probably damaging 1.00
R4872:Vmn2r78 UTSW 7 86,603,916 (GRCm39) missense possibly damaging 0.87
R4928:Vmn2r78 UTSW 7 86,603,835 (GRCm39) missense probably damaging 1.00
R5101:Vmn2r78 UTSW 7 86,571,563 (GRCm39) missense probably damaging 1.00
R5265:Vmn2r78 UTSW 7 86,569,332 (GRCm39) missense probably damaging 1.00
R5328:Vmn2r78 UTSW 7 86,570,238 (GRCm39) missense probably damaging 0.98
R5442:Vmn2r78 UTSW 7 86,569,330 (GRCm39) missense possibly damaging 0.95
R5567:Vmn2r78 UTSW 7 86,570,737 (GRCm39) missense probably benign 0.17
R5572:Vmn2r78 UTSW 7 86,564,720 (GRCm39) missense probably benign 0.01
R5636:Vmn2r78 UTSW 7 86,603,637 (GRCm39) missense probably damaging 0.99
R5901:Vmn2r78 UTSW 7 86,603,796 (GRCm39) missense probably damaging 1.00
R5977:Vmn2r78 UTSW 7 86,604,115 (GRCm39) missense probably benign 0.00
R5977:Vmn2r78 UTSW 7 86,569,541 (GRCm39) missense possibly damaging 0.74
R6276:Vmn2r78 UTSW 7 86,570,318 (GRCm39) missense probably benign 0.00
R6386:Vmn2r78 UTSW 7 86,571,545 (GRCm39) nonsense probably null
R6724:Vmn2r78 UTSW 7 86,603,466 (GRCm39) missense probably damaging 0.99
R6852:Vmn2r78 UTSW 7 86,603,811 (GRCm39) missense probably damaging 1.00
R6896:Vmn2r78 UTSW 7 86,571,558 (GRCm39) missense probably benign 0.10
R7385:Vmn2r78 UTSW 7 86,571,633 (GRCm39) missense probably benign 0.18
R7578:Vmn2r78 UTSW 7 86,603,552 (GRCm39) nonsense probably null
R7680:Vmn2r78 UTSW 7 86,604,149 (GRCm39) missense probably damaging 1.00
R7748:Vmn2r78 UTSW 7 86,570,343 (GRCm39) missense probably benign 0.00
R7852:Vmn2r78 UTSW 7 86,569,378 (GRCm39) nonsense probably null
R8031:Vmn2r78 UTSW 7 86,604,075 (GRCm39) missense probably damaging 1.00
R8070:Vmn2r78 UTSW 7 86,571,695 (GRCm39) missense probably benign 0.01
R8085:Vmn2r78 UTSW 7 86,603,998 (GRCm39) missense probably benign 0.00
R8163:Vmn2r78 UTSW 7 86,603,660 (GRCm39) missense probably damaging 1.00
R8501:Vmn2r78 UTSW 7 86,570,094 (GRCm39) missense probably damaging 0.99
R8749:Vmn2r78 UTSW 7 86,603,513 (GRCm39) missense possibly damaging 0.81
R9209:Vmn2r78 UTSW 7 86,569,431 (GRCm39) missense probably benign 0.08
RF018:Vmn2r78 UTSW 7 86,603,639 (GRCm39) nonsense probably null
Z1177:Vmn2r78 UTSW 7 86,603,982 (GRCm39) missense probably benign 0.02
Z1177:Vmn2r78 UTSW 7 86,570,415 (GRCm39) missense probably benign 0.44
Posted On 2016-08-02