Mutagenetix > Incidental Mutations

Incidental Mutation 'IGL03334:B4galnt4'

List |< first << previous [record 6 of 38] next >> last >|

416982

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

B4galnt4

Ensembl Gene

ENSMUSG00000055629

Gene Name

beta-1,4-N-acetyl-galactosaminyl transferase 4

Synonyms

LOC381951

Accession Numbers

Genbank: NM_177897; MGI: 2652891

Is this an essential gene?

Probably non essential (E-score: 0.116) question?

Stock #

IGL03334

Quality Score

Status

Chromosome

Chromosomal Location

141061104-141072400 bp(+) (GRCm38)

Type of Mutation

splice site (5 bp from exon)

DNA Base Change (assembly)

G to A at 141067441 bp

Zygosity

Heterozygous

Amino Acid Change

Ref Sequence

ENSEMBL: ENSMUSP00000039758 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000048002]

Predicted Effect

probably null
Transcript: ENSMUST00000048002

SMART Domains

Protein: ENSMUSP00000039758
Gene: ENSMUSG00000055629

Domain	Start	End	E-Value	Type
transmembrane domain	13	31	N/A	INTRINSIC
low complexity region	68	83	N/A	INTRINSIC
PA14	129	276	6.07e-7	SMART
low complexity region	412	421	N/A	INTRINSIC
low complexity region	433	449	N/A	INTRINSIC
low complexity region	461	481	N/A	INTRINSIC
low complexity region	634	660	N/A	INTRINSIC
Pfam:CHGN	691	1024	8.9e-31	PFAM
Pfam:Glyco_transf_7C	939	1017	1.2e-15	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000209546

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000210203

Predicted Effect

probably benign
Transcript: ENSMUST00000210517

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000211455

Coding Region Coverage

Validation Efficiency

Allele List at MGI

All alleles(3) : Targeted, knock-out(1) Gene trapped(2)

Other mutations in this stock

Total: 37 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
9930111J21Rik1	A	G	11: 48,947,475	F762L	probably benign	Het
A430078G23Rik	A	T	8: 3,388,023	I286F	probably benign	Het
Angpt1	T	A	15: 42,496,412	E208V	possibly damaging	Het
Arhgef5	T	C	6: 43,274,000	S562P	possibly damaging	Het
Asb6	T	C	2: 30,824,484	T205A	probably benign	Het
Clca4a	A	T	3: 144,953,866	M743K	probably benign	Het
Col14a1	T	C	15: 55,448,821		probably benign	Het
Col27a1	A	T	4: 63,314,722	Y359F	probably damaging	Het
Dhcr7	T	A	7: 143,840,497	V125D	possibly damaging	Het
Ercc3	T	C	18: 32,240,837		probably null	Het
Fnbp1l	A	G	3: 122,557,949	V315A	probably benign	Het
Gm17174	T	A	14: 51,591,963	R48*	probably null	Het
Golga4	C	T	9: 118,537,233		probably benign	Het
Grin1	C	T	2: 25,298,393		probably null	Het
Ifi203	T	A	1: 173,937,835	K58*	probably null	Het
Ighv2-9-1	A	G	12: 113,769,923	S93P	probably benign	Het
Il27ra	A	G	8: 84,031,122	V594A	probably benign	Het
Krr1	T	G	10: 111,980,054	S275R	probably benign	Het
Lars	T	C	18: 42,221,506	D792G	probably benign	Het
Myo1f	G	A	17: 33,598,194	R737H	probably damaging	Het
Nebl	T	A	2: 17,413,711	H292L	probably damaging	Het
Nell1	C	A	7: 50,062,611		probably null	Het
Nktr	T	C	9: 121,748,176	F412L	probably benign	Het
Nlrp3	T	A	11: 59,549,016	I473N	probably damaging	Het
Olfr338	T	C	2: 36,377,051	Y92H	possibly damaging	Het
Phf3	A	G	1: 30,805,729	V1383A	probably damaging	Het
Prss48	T	C	3: 85,997,318	E191G	probably damaging	Het
Psg25	T	A	7: 18,529,774	L41F	probably benign	Het
Sema3b	A	G	9: 107,604,077	L78P	probably damaging	Het
Spen	G	T	4: 141,469,969	N3496K	probably damaging	Het
Tbk1	A	T	10: 121,584,199	H28Q	possibly damaging	Het
Trpv3	T	A	11: 73,281,665		probably benign	Het
Vmn1r218	T	C	13: 23,136,618	L45P	probably damaging	Het
Vmn2r35	T	A	7: 7,786,494	Y748F	probably damaging	Het
Vps18	C	T	2: 119,297,482	R929W	probably damaging	Het
Xpnpep1	T	C	19: 53,010,146	K224E	probably damaging	Het
Zbed5	T	A	5: 129,902,355	F382I	possibly damaging	Het

Other mutations in B4galnt4

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01598:B4galnt4	APN	7	141070515	missense	probably benign	0.15
IGL02055:B4galnt4	APN	7	141070818	missense	probably damaging	1.00
IGL02248:B4galnt4	APN	7	141067808	unclassified	probably benign
IGL02955:B4galnt4	APN	7	141064678	missense	probably null	0.08
H8786:B4galnt4	UTSW	7	141071322	missense	probably damaging	0.99
R0520:B4galnt4	UTSW	7	141067373	nonsense	probably null
R0735:B4galnt4	UTSW	7	141064323	missense	probably benign	0.24
R1355:B4galnt4	UTSW	7	141065395	missense	probably damaging	1.00
R1864:B4galnt4	UTSW	7	141070533	missense	probably damaging	1.00
R1874:B4galnt4	UTSW	7	141070526	missense	probably damaging	1.00
R1928:B4galnt4	UTSW	7	141068148	nonsense	probably null
R1969:B4galnt4	UTSW	7	141064848	missense	probably benign	0.01
R3429:B4galnt4	UTSW	7	141070839	missense	probably damaging	1.00
R4239:B4galnt4	UTSW	7	141061326	missense	probably damaging	1.00
R4382:B4galnt4	UTSW	7	141070536	missense	probably damaging	0.99
R4517:B4galnt4	UTSW	7	141067722	missense	probably damaging	1.00
R4748:B4galnt4	UTSW	7	141071720	missense	probably damaging	1.00
R4827:B4galnt4	UTSW	7	141068479	missense	probably benign	0.00
R4831:B4galnt4	UTSW	7	141067721	missense	probably damaging	0.99
R4831:B4galnt4	UTSW	7	141064557	critical splice donor site	probably null
R4898:B4galnt4	UTSW	7	141068260	missense	probably benign	0.11
R5028:B4galnt4	UTSW	7	141068062	missense	probably benign	0.40
R5249:B4galnt4	UTSW	7	141065070	missense	probably damaging	1.00
R5267:B4galnt4	UTSW	7	141070611	missense	probably damaging	0.99
R5728:B4galnt4	UTSW	7	141070575	missense	probably benign	0.00
R5924:B4galnt4	UTSW	7	141070829	missense	probably damaging	1.00
R6063:B4galnt4	UTSW	7	141064730	missense	probably benign	0.08
R6311:B4galnt4	UTSW	7	141068659	missense	probably damaging	1.00
R6376:B4galnt4	UTSW	7	141067422	missense	possibly damaging	0.87
R6689:B4galnt4	UTSW	7	141067984	missense	probably benign	0.25
R6954:B4galnt4	UTSW	7	141067232	missense	probably benign	0.01
R6974:B4galnt4	UTSW	7	141067536	missense	possibly damaging	0.95
R7041:B4galnt4	UTSW	7	141070680	missense	probably damaging	1.00
R7092:B4galnt4	UTSW	7	141068636	missense	probably damaging	1.00
R7359:B4galnt4	UTSW	7	141071284	missense	probably damaging	1.00
R7367:B4galnt4	UTSW	7	141064475	missense	probably damaging	1.00
R7409:B4galnt4	UTSW	7	141067003	splice site	probably null
R7519:B4galnt4	UTSW	7	141064344	missense	probably damaging	1.00
R7664:B4galnt4	UTSW	7	141067713	missense	probably damaging	1.00
R7679:B4galnt4	UTSW	7	141067765	missense	probably benign	0.28
R7782:B4galnt4	UTSW	7	141065075	missense	probably damaging	1.00
R8103:B4galnt4	UTSW	7	141064651	missense	possibly damaging	0.91
RF007:B4galnt4	UTSW	7	141070696	critical splice donor site	probably null
YA93:B4galnt4	UTSW	7	141067411	missense	possibly damaging	0.77

Posted On

2016-08-02