Mutagenetix > Incidental Mutation

Incidental Mutation 'IGL03102:Gpr35'

418802

Institutional Source

Australian Phenomics Network (link to record)

Gene Symbol

Gpr35

Ensembl Gene

ENSMUSG00000026271

Gene Name

G protein-coupled receptor 35

Synonyms

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

IGL03102

Quality Score

Status

Chromosome

Chromosomal Location

92878587-92914113 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 92910299 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Threonine to Serine at position 4 (T4S)

Ref Sequence

ENSEMBL: ENSMUSP00000139787 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000027489] [ENSMUST00000064480] [ENSMUST00000169198] [ENSMUST00000185421] [ENSMUST00000186298] [ENSMUST00000189697]

AlphaFold

Q9ES90

Predicted Effect

probably benign
Transcript: ENSMUST00000027489

SMART Domains

Protein: ENSMUSP00000027489
Gene: ENSMUSG00000026271

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	28	289	3.5e-7	PFAM
Pfam:7tm_1	34	275	1.8e-34	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000064480
AA Change: T4S

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000070832
Gene: ENSMUSG00000026271
AA Change: T4S

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	28	289	3.5e-7	PFAM
Pfam:7tm_1	34	275	3.6e-42	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000169198
AA Change: T4S

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000126914
Gene: ENSMUSG00000026271
AA Change: T4S

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	28	289	3.5e-7	PFAM
Pfam:7tm_1	34	275	3.6e-42	PFAM

Predicted Effect

unknown
Transcript: ENSMUST00000185421
AA Change: T4S

Predicted Effect

probably benign
Transcript: ENSMUST00000186298
AA Change: T4S

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000139648
Gene: ENSMUSG00000026271
AA Change: T4S

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	28	289	3.5e-7	PFAM
Pfam:7tm_1	34	275	3.6e-42	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000189697
AA Change: T4S

PolyPhen 2 Score 0.001 (Sensitivity: 0.99; Specificity: 0.15)

SMART Domains

Protein: ENSMUSP00000139787
Gene: ENSMUSG00000026271
AA Change: T4S

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	28	147	5.7e-6	PFAM
Pfam:7tm_1	34	147	1.4e-24	PFAM

Meta Mutation Damage Score

0.1320

Coding Region Coverage

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 65 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Alpk3	T	C	7: 80,744,804 (GRCm39)		probably null	Het
Alyref	G	A	11: 120,488,591 (GRCm39)	P79L	possibly damaging	Het
Arhgap28	T	C	17: 68,203,231 (GRCm39)	D74G	probably damaging	Het
Atp1a4	T	A	1: 172,058,718 (GRCm39)	D909V	probably damaging	Het
Cdc5l	A	T	17: 45,718,857 (GRCm39)	D586E	probably damaging	Het
Chd3	G	T	11: 69,252,022 (GRCm39)	Y79*	probably null	Het
Cnot3	C	A	7: 3,659,155 (GRCm39)	S467*	probably null	Het
Col18a1	A	T	10: 76,903,457 (GRCm39)		probably benign	Het
Col19a1	C	A	1: 24,367,134 (GRCm39)	G483C	probably damaging	Het
Col5a3	A	C	9: 20,715,931 (GRCm39)		probably null	Het
Dctn5	A	T	7: 121,732,382 (GRCm39)	N9I	probably benign	Het
Emc10	T	A	7: 44,141,413 (GRCm39)	N225I	probably damaging	Het
Fam219b	A	G	9: 57,447,981 (GRCm39)	Y158C	probably damaging	Het
Fras1	T	C	5: 96,874,394 (GRCm39)	V2273A	probably benign	Het
Frem3	T	A	8: 81,339,661 (GRCm39)	H651Q	possibly damaging	Het
Gm4076	T	A	13: 85,275,438 (GRCm39)		noncoding transcript	Het
Ifnab	T	G	4: 88,609,062 (GRCm39)	T135P	possibly damaging	Het
Jag1	T	C	2: 136,926,608 (GRCm39)	I979V	probably benign	Het
Kank1	G	T	19: 25,403,282 (GRCm39)	M1097I	probably damaging	Het
Kcnq3	A	G	15: 65,900,637 (GRCm39)	V206A	probably damaging	Het
Kel	T	C	6: 41,679,917 (GRCm39)	K91R	probably benign	Het
Kirrel1	G	T	3: 86,990,807 (GRCm39)	R672S	probably damaging	Het
Kmt2d	A	G	15: 98,753,424 (GRCm39)	M143T	probably benign	Het
Kpna1	A	G	16: 35,833,289 (GRCm39)	I122V	probably damaging	Het
Lrpap1	A	G	5: 35,250,694 (GRCm39)	S353P	probably damaging	Het
Mtfr1l	T	A	4: 134,259,543 (GRCm39)	Q11L	probably damaging	Het
Muc5b	G	A	7: 141,416,806 (GRCm39)	V3251M	probably benign	Het
Mup8	C	T	4: 60,219,746 (GRCm39)	D174N	probably benign	Het
Nup155	A	T	15: 8,176,768 (GRCm39)	E1015D	probably benign	Het
Or10ak14	C	A	4: 118,611,131 (GRCm39)	L201F	probably benign	Het
Or9i14	T	C	19: 13,792,735 (GRCm39)	Y73C	probably damaging	Het
P2rx7	T	C	5: 122,801,668 (GRCm39)	F188L	possibly damaging	Het
Pacrg	A	G	17: 11,058,719 (GRCm39)	F13L	probably benign	Het
Palb2	A	T	7: 121,723,722 (GRCm39)	S676T	possibly damaging	Het
Pdia6	T	A	12: 17,331,040 (GRCm39)		probably null	Het
Pfkm	A	T	15: 98,024,266 (GRCm39)	I425F	possibly damaging	Het
Pikfyve	C	T	1: 65,291,626 (GRCm39)	R1282*	probably null	Het
Pole	C	T	5: 110,444,939 (GRCm39)	L432F	probably damaging	Het
Pramel25	T	C	4: 143,520,116 (GRCm39)	V120A	possibly damaging	Het
Prr5	G	T	15: 84,650,508 (GRCm39)		probably benign	Het
Prxl2b	T	C	4: 154,981,058 (GRCm39)		probably benign	Het
Psat1	A	G	19: 15,883,487 (GRCm39)	Y343H	probably damaging	Het
Ptprj	C	T	2: 90,309,312 (GRCm39)	R51K	probably benign	Het
Qars1	A	G	9: 108,386,118 (GRCm39)	D103G	probably benign	Het
Rims2	A	T	15: 39,322,989 (GRCm39)	I768F	possibly damaging	Het
Robo4	T	A	9: 37,315,481 (GRCm39)	V275E	probably damaging	Het
Ryr2	A	G	13: 11,650,468 (GRCm39)		probably benign	Het
Sez6l	T	C	5: 112,623,269 (GRCm39)	H94R	probably benign	Het
Slco1c1	T	A	6: 141,490,553 (GRCm39)	N211K	possibly damaging	Het
Strbp	T	C	2: 37,476,515 (GRCm39)		probably benign	Het
Tceanc2	T	A	4: 107,004,878 (GRCm39)	H90L	probably damaging	Het
Tdrkh	A	T	3: 94,331,844 (GRCm39)	T90S	possibly damaging	Het
Tiam2	A	G	17: 3,559,823 (GRCm39)	D1288G	probably damaging	Het
Tln1	T	C	4: 43,532,861 (GRCm39)	D2447G	possibly damaging	Het
Tmem63c	G	A	12: 87,112,323 (GRCm39)	V141M	probably benign	Het
Tpp2	T	A	1: 43,995,649 (GRCm39)	V268E	probably damaging	Het
Tprkb	T	A	6: 85,901,400 (GRCm39)	C13S	probably benign	Het
Traf3ip3	T	C	1: 192,877,385 (GRCm39)	T184A	probably damaging	Het
Trpc6	T	A	9: 8,649,302 (GRCm39)	M504K	probably benign	Het
Ttn	G	T	2: 76,597,567 (GRCm39)	S18036*	probably null	Het
Wdfy4	A	T	14: 32,688,392 (GRCm39)	C2914S	probably damaging	Het
Ylpm1	T	A	12: 85,096,032 (GRCm39)		probably benign	Het
Zfp644	T	C	5: 106,785,134 (GRCm39)	H471R	probably damaging	Het
Zfp747l1	T	C	7: 126,983,951 (GRCm39)	T384A	probably benign	Het
Zfyve16	C	T	13: 92,648,325 (GRCm39)	E910K	possibly damaging	Het

Other mutations in Gpr35

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00509:Gpr35	APN	1	92,910,594 (GRCm39)	missense	probably damaging	0.99
PIT4280001:Gpr35	UTSW	1	92,910,356 (GRCm39)	missense	probably damaging	1.00
R0015:Gpr35	UTSW	1	92,910,954 (GRCm39)	missense	probably damaging	1.00
R0412:Gpr35	UTSW	1	92,910,506 (GRCm39)	missense	probably benign	0.01
R1203:Gpr35	UTSW	1	92,910,870 (GRCm39)	missense	probably damaging	0.98
R1515:Gpr35	UTSW	1	92,910,770 (GRCm39)	missense	probably damaging	1.00
R2872:Gpr35	UTSW	1	92,910,848 (GRCm39)	missense	probably benign	0.34
R2872:Gpr35	UTSW	1	92,910,848 (GRCm39)	missense	probably benign	0.34
R3498:Gpr35	UTSW	1	92,911,113 (GRCm39)	missense	probably damaging	1.00
R3499:Gpr35	UTSW	1	92,911,113 (GRCm39)	missense	probably damaging	1.00
R4732:Gpr35	UTSW	1	92,911,107 (GRCm39)	missense	probably damaging	1.00
R4733:Gpr35	UTSW	1	92,911,107 (GRCm39)	missense	probably damaging	1.00
R5270:Gpr35	UTSW	1	92,910,299 (GRCm39)	missense	probably benign	0.00
R5969:Gpr35	UTSW	1	92,910,942 (GRCm39)	missense	probably damaging	1.00
R6769:Gpr35	UTSW	1	92,910,426 (GRCm39)	missense	probably damaging	0.97
R6771:Gpr35	UTSW	1	92,910,426 (GRCm39)	missense	probably damaging	0.97
R7144:Gpr35	UTSW	1	92,910,353 (GRCm39)	missense	probably benign	0.11
R7395:Gpr35	UTSW	1	92,910,929 (GRCm39)	missense	probably damaging	1.00
R8156:Gpr35	UTSW	1	92,910,437 (GRCm39)	missense	probably damaging	1.00
Z1177:Gpr35	UTSW	1	92,910,738 (GRCm39)	missense	probably benign	0.00

Posted On

2016-08-02