Incidental Mutation 'IGL03117:Chrnb2'
ID419462
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Chrnb2
Ensembl Gene ENSMUSG00000027950
Gene Namecholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
SynonymsC030030P04Rik, Acrb2, Acrb-2, [b]2-nAchR
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.328) question?
Stock #IGL03117
Quality Score
Status
Chromosome3
Chromosomal Location89746195-89764632 bp(-) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to G at 89763245 bp
ZygosityHeterozygous
Amino Acid Change Valine to Alanine at position 62 (V62A)
Ref Sequence ENSEMBL: ENSMUSP00000143441 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000029562] [ENSMUST00000200558]
Predicted Effect probably damaging
Transcript: ENSMUST00000029562
AA Change: V62A

PolyPhen 2 Score 0.996 (Sensitivity: 0.55; Specificity: 0.98)
SMART Domains Protein: ENSMUSP00000029562
Gene: ENSMUSG00000027950
AA Change: V62A

DomainStartEndE-ValueType
Pfam:Neur_chan_LBD 29 234 5.6e-75 PFAM
Pfam:Neur_chan_memb 241 477 1.7e-86 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000038450
Predicted Effect noncoding transcript
Transcript: ENSMUST00000195940
Predicted Effect noncoding transcript
Transcript: ENSMUST00000199372
Predicted Effect probably damaging
Transcript: ENSMUST00000200558
AA Change: V62A

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000143441
Gene: ENSMUSG00000027950
AA Change: V62A

DomainStartEndE-ValueType
signal peptide 1 25 N/A INTRINSIC
Pfam:Neur_chan_LBD 29 234 1.5e-71 PFAM
Pfam:Neur_chan_memb 241 454 4.8e-61 PFAM
low complexity region 657 666 N/A INTRINSIC
Coding Region Coverage
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Neuronal acetylcholine receptors are homo- or heteropentameric complexes composed of homologous alpha and beta subunits. They belong to a superfamily of ligand-gated ion channels which allow the flow of sodium and potassium across the plasma membrane in response to ligands such as acetylcholine and nicotine. This gene encodes one of several beta subunits. Mutations in this gene are associated with autosomal dominant nocturnal frontal lobe epilepsy. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygotes for targeted null mutations have impaired responses to nicotine, but show improved passive avoidance behavior. With age, mutants show more neurodegeneration and alterations of the visual system, with decreased cortical visual acuity. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 54 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Cacna2d3 A G 14: 29,467,952 L109P probably damaging Het
Caprin2 A T 6: 148,862,466 S568T possibly damaging Het
Catip A G 1: 74,364,585 T154A probably null Het
Ccdc129 A G 6: 55,898,129 T355A probably benign Het
Ccdc187 A G 2: 26,287,968 S270P possibly damaging Het
Ccdc88a A G 11: 29,374,559 Y39C probably damaging Het
Chrdl2 A T 7: 100,027,580 H203L possibly damaging Het
Cklf T A 8: 104,257,423 S73T possibly damaging Het
Clk1 A G 1: 58,417,007 probably null Het
Ctdp1 T C 18: 80,449,501 D593G probably damaging Het
Ctsc A T 7: 88,309,780 I423F probably damaging Het
D130043K22Rik T A 13: 24,889,842 V968E probably damaging Het
Dennd4c A G 4: 86,777,903 S166G possibly damaging Het
Dnah2 G T 11: 69,436,291 probably benign Het
Dnajb11 G T 16: 22,869,138 R206L probably benign Het
Dsel A T 1: 111,859,178 probably benign Het
Ehd2 T C 7: 15,950,471 S468G possibly damaging Het
Ehmt2 T A 17: 34,906,811 V640E possibly damaging Het
Elmo2 T A 2: 165,298,653 E299D probably benign Het
Eps8l1 T C 7: 4,470,887 L231P probably damaging Het
Esd A G 14: 74,741,246 T83A probably damaging Het
Flt3 A G 5: 147,356,210 F529L probably benign Het
Hnrnpu G A 1: 178,330,774 probably benign Het
Hpx G T 7: 105,600,071 A7E possibly damaging Het
Ighv6-5 C T 12: 114,416,700 V85M possibly damaging Het
Itpr3 G A 17: 27,119,266 V2503I probably damaging Het
Matr3 G T 18: 35,572,657 G212C probably damaging Het
Mrpl35 A T 6: 71,816,279 Y129* probably null Het
Myh2 T C 11: 67,180,884 I509T possibly damaging Het
Nat8l G T 5: 34,000,944 A233S probably damaging Het
Nipbl A C 15: 8,332,452 L1447W probably damaging Het
Paf1 T A 7: 28,395,056 C31S possibly damaging Het
Parp4 A C 14: 56,602,856 T573P probably benign Het
Phf12 A T 11: 78,023,020 probably benign Het
Pi4k2b A G 5: 52,748,423 E102G probably benign Het
Pou2f1 A G 1: 165,934,813 C7R probably benign Het
Prpsap2 T C 11: 61,740,989 R181G probably benign Het
Psd A G 19: 46,323,122 probably benign Het
Ptgds T C 2: 25,469,610 T22A probably benign Het
Rab21 A T 10: 115,315,192 probably null Het
Relb T C 7: 19,612,657 D330G probably damaging Het
Rhoc A T 3: 104,792,920 T100S probably benign Het
Ryr1 G T 7: 29,102,964 H744N probably damaging Het
Sardh C T 2: 27,239,446 G280D probably damaging Het
Scyl2 A C 10: 89,657,867 N346K possibly damaging Het
Sec16b T C 1: 157,535,400 F267S probably damaging Het
Slc44a5 T A 3: 154,251,077 M322K probably benign Het
St8sia4 T A 1: 95,591,783 N327Y probably benign Het
Tbl1xr1 T A 3: 22,203,159 Y395* probably null Het
Unc13c A T 9: 73,534,025 S1897R probably benign Het
Vangl2 A G 1: 172,012,848 S58P probably damaging Het
Vmn1r17 A G 6: 57,360,516 I288T probably benign Het
Vmn1r236 A G 17: 21,287,246 I209V probably benign Het
Zfp809 A G 9: 22,238,654 Y149C probably damaging Het
Other mutations in Chrnb2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL03108:Chrnb2 APN 3 89763374 splice site probably benign
IGL03391:Chrnb2 APN 3 89760877 missense probably damaging 0.98
R0131:Chrnb2 UTSW 3 89764406 start codon destroyed probably null 0.01
R0131:Chrnb2 UTSW 3 89764406 start codon destroyed probably null 0.01
R0132:Chrnb2 UTSW 3 89764406 start codon destroyed probably null 0.01
R1726:Chrnb2 UTSW 3 89761202 missense probably damaging 1.00
R2095:Chrnb2 UTSW 3 89761437 missense probably benign 0.01
R2124:Chrnb2 UTSW 3 89769341 unclassified probably benign
R3548:Chrnb2 UTSW 3 89761591 missense probably benign 0.04
R4212:Chrnb2 UTSW 3 89761544 missense probably damaging 1.00
R4902:Chrnb2 UTSW 3 89760941 missense probably damaging 1.00
R6307:Chrnb2 UTSW 3 89761524 missense probably damaging 1.00
R6751:Chrnb2 UTSW 3 89761576 missense probably damaging 1.00
R6999:Chrnb2 UTSW 3 89761315 missense possibly damaging 0.71
R7318:Chrnb2 UTSW 3 89763367 critical splice acceptor site probably null
R7826:Chrnb2 UTSW 3 89763243 missense probably damaging 1.00
R8025:Chrnb2 UTSW 3 89761342 missense probably damaging 1.00
R8094:Chrnb2 UTSW 3 89761391 missense probably damaging 1.00
R8143:Chrnb2 UTSW 3 89747323 missense unknown
R8739:Chrnb2 UTSW 3 89762439 missense probably damaging 1.00
R8809:Chrnb2 UTSW 3 89757150 missense probably benign
Posted On2016-08-02