Incidental Mutation 'IGL03398:Parp6'
ID421322
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Parp6
Ensembl Gene ENSMUSG00000025237
Gene Namepoly (ADP-ribose) polymerase family, member 6
Synonyms
Accession Numbers
Is this an essential gene? Possibly essential (E-score: 0.598) question?
Stock #IGL03398
Quality Score
Status
Chromosome9
Chromosomal Location59617284-59650285 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to C at 59641053 bp
ZygosityHeterozygous
Amino Acid Change Isoleucine to Threonine at position 483 (I483T)
Ref Sequence ENSEMBL: ENSMUSP00000026267 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000026267] [ENSMUST00000050483] [ENSMUST00000167091] [ENSMUST00000216351]
Predicted Effect probably damaging
Transcript: ENSMUST00000026267
AA Change: I483T

PolyPhen 2 Score 0.974 (Sensitivity: 0.76; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000026267
Gene: ENSMUSG00000025237
AA Change: I483T

DomainStartEndE-ValueType
low complexity region 9 21 N/A INTRINSIC
low complexity region 175 189 N/A INTRINSIC
low complexity region 323 335 N/A INTRINSIC
Pfam:PARP 450 580 5.6e-15 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000050483
AA Change: I463T

PolyPhen 2 Score 0.964 (Sensitivity: 0.78; Specificity: 0.95)
SMART Domains Protein: ENSMUSP00000063065
Gene: ENSMUSG00000025237
AA Change: I463T

DomainStartEndE-ValueType
low complexity region 9 21 N/A INTRINSIC
low complexity region 175 189 N/A INTRINSIC
low complexity region 303 315 N/A INTRINSIC
SCOP:d1a26_2 409 475 4e-13 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000167091
SMART Domains Protein: ENSMUSP00000129456
Gene: ENSMUSG00000025237

DomainStartEndE-ValueType
low complexity region 9 21 N/A INTRINSIC
low complexity region 175 189 N/A INTRINSIC
low complexity region 323 335 N/A INTRINSIC
SCOP:d1a26_2 429 473 4e-3 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000214956
Predicted Effect probably damaging
Transcript: ENSMUST00000216351
AA Change: I463T

PolyPhen 2 Score 0.968 (Sensitivity: 0.77; Specificity: 0.95)
Predicted Effect noncoding transcript
Transcript: ENSMUST00000216482
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 25 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
5330417C22Rik A T 3: 108,461,221 V818D possibly damaging Het
Aasdh T A 5: 76,891,719 I248L probably benign Het
Ackr2 C T 9: 121,908,588 L10F probably damaging Het
Ankhd1 A G 18: 36,656,837 probably benign Het
Arhgap5 A G 12: 52,517,311 E355G probably damaging Het
Arhgef12 A G 9: 42,978,226 V1031A probably damaging Het
Ash1l T A 3: 89,007,220 V1719E probably benign Het
Chd5 A G 4: 152,377,082 N1284D probably damaging Het
Dennd4a A G 9: 64,871,882 D549G probably benign Het
Dhx32 A G 7: 133,759,525 Y60H probably damaging Het
Fcamr A G 1: 130,803,248 I79M probably damaging Het
Filip1 A G 9: 79,818,943 V798A probably benign Het
Gm13119 A G 4: 144,363,491 D367G probably damaging Het
Ifi208 A C 1: 173,683,251 N324T probably damaging Het
Nelfcd G A 2: 174,426,832 A559T possibly damaging Het
Nsl1 T C 1: 191,082,164 probably benign Het
Ppp2r5e A C 12: 75,462,405 W367G possibly damaging Het
Serpini2 G A 3: 75,259,545 T135I probably benign Het
Sgsm1 T A 5: 113,255,316 N955I possibly damaging Het
Tenm2 A G 11: 36,024,543 Y2055H probably damaging Het
Tex2 T C 11: 106,568,272 N111D probably damaging Het
Ttc5 T C 14: 50,781,507 E51G possibly damaging Het
Usp47 A T 7: 112,074,503 E334V probably damaging Het
Wdfy4 T C 14: 33,047,290 K2227E probably benign Het
Xkr4 T C 1: 3,216,575 E464G probably damaging Het
Other mutations in Parp6
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00961:Parp6 APN 9 59632959 missense probably damaging 1.00
IGL01366:Parp6 APN 9 59636713 missense possibly damaging 0.75
IGL01385:Parp6 APN 9 59630612 splice site probably benign
IGL02000:Parp6 APN 9 59648892 missense probably benign 0.00
IGL02001:Parp6 APN 9 59649961 missense possibly damaging 0.90
IGL02315:Parp6 APN 9 59641738 intron probably benign
IGL02719:Parp6 APN 9 59630738 missense probably benign 0.26
IGL02928:Parp6 APN 9 59641063 missense possibly damaging 0.70
IGL03169:Parp6 APN 9 59650017 nonsense probably null
R0165:Parp6 UTSW 9 59632925 missense probably damaging 1.00
R0602:Parp6 UTSW 9 59649365 splice site probably benign
R0781:Parp6 UTSW 9 59649564 missense probably damaging 0.99
R1110:Parp6 UTSW 9 59649564 missense probably damaging 0.99
R1730:Parp6 UTSW 9 59633538 nonsense probably null
R1783:Parp6 UTSW 9 59633538 nonsense probably null
R2264:Parp6 UTSW 9 59624005 missense probably damaging 1.00
R4323:Parp6 UTSW 9 59630686 missense possibly damaging 0.84
R4654:Parp6 UTSW 9 59641100 splice site probably null
R4672:Parp6 UTSW 9 59640110 missense probably damaging 1.00
R4673:Parp6 UTSW 9 59640110 missense probably damaging 1.00
R4708:Parp6 UTSW 9 59641769 missense probably damaging 0.98
R4709:Parp6 UTSW 9 59641769 missense probably damaging 0.98
R4763:Parp6 UTSW 9 59631365 missense probably damaging 1.00
R4782:Parp6 UTSW 9 59634984 splice site probably null
R4825:Parp6 UTSW 9 59624362 splice site probably null
R5563:Parp6 UTSW 9 59628673 splice site probably null
R5700:Parp6 UTSW 9 59624727 missense probably damaging 1.00
R6235:Parp6 UTSW 9 59630815 missense probably benign 0.34
R6269:Parp6 UTSW 9 59650012 missense probably benign
R6383:Parp6 UTSW 9 59623939 missense probably damaging 0.99
X0061:Parp6 UTSW 9 59630765 missense probably benign 0.25
Posted On2016-08-02