Incidental Mutation 'IGL03406:Gad1-ps'
ID |
421608 |
Institutional Source |
Australian Phenomics Network
(link to record)
|
Gene Symbol |
Gad1-ps
|
Ensembl Gene |
ENSMUSG00000090665 |
Gene Name |
glutamate decarboxylase 1, pseudogene |
Synonyms |
Gad-1ps |
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.208)
|
Stock # |
IGL03406
|
Quality Score |
|
Status
|
|
Chromosome |
10 |
Chromosomal Location |
99279906-99281681 bp(+) (GRCm39) |
Type of Mutation |
exon |
DNA Base Change (assembly) |
C to T
at 99280641 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
|
Gene Model |
predicted gene model for transcript(s):
|
AlphaFold |
no structure available at present |
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000167243
|
SMART Domains |
Protein: ENSMUSP00000133048 Gene: ENSMUSG00000090665
Domain | Start | End | E-Value | Type |
Pfam:Pyridoxal_deC
|
1 |
368 |
4.3e-153 |
PFAM |
Pfam:Beta_elim_lyase
|
91 |
436 |
7.3e-8 |
PFAM |
Pfam:Aminotran_5
|
130 |
370 |
4.7e-7 |
PFAM |
|
Coding Region Coverage |
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 30 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
A530016L24Rik |
T |
A |
12: 112,463,317 (GRCm39) |
|
probably null |
Het |
Adcy7 |
C |
T |
8: 89,044,947 (GRCm39) |
R228* |
probably null |
Het |
Cdcp1 |
T |
C |
9: 123,014,378 (GRCm39) |
H132R |
probably benign |
Het |
Cfap107 |
A |
G |
4: 144,150,414 (GRCm39) |
Y56H |
probably damaging |
Het |
Cyp4a32 |
T |
C |
4: 115,459,500 (GRCm39) |
I78T |
probably benign |
Het |
Fap |
A |
T |
2: 62,372,466 (GRCm39) |
|
probably benign |
Het |
Gli3 |
T |
C |
13: 15,823,166 (GRCm39) |
I296T |
probably damaging |
Het |
H2-Q2 |
T |
C |
17: 35,561,801 (GRCm39) |
V97A |
probably benign |
Het |
Hr |
T |
A |
14: 70,800,860 (GRCm39) |
|
probably null |
Het |
Itgax |
C |
T |
7: 127,748,370 (GRCm39) |
T1133I |
possibly damaging |
Het |
L3mbtl2 |
G |
A |
15: 81,566,194 (GRCm39) |
R339H |
probably damaging |
Het |
Mast4 |
T |
C |
13: 102,873,615 (GRCm39) |
K1726E |
possibly damaging |
Het |
Nlrc5 |
T |
C |
8: 95,203,483 (GRCm39) |
Y528H |
probably benign |
Het |
Nmnat3 |
G |
A |
9: 98,281,530 (GRCm39) |
G44D |
probably damaging |
Het |
Nol8 |
A |
T |
13: 49,815,044 (GRCm39) |
D366V |
probably damaging |
Het |
Or13a25 |
C |
A |
7: 140,247,424 (GRCm39) |
L68M |
probably damaging |
Het |
Pde4d |
A |
T |
13: 110,091,125 (GRCm39) |
|
probably benign |
Het |
Ptpn22 |
C |
A |
3: 103,819,332 (GRCm39) |
N795K |
probably benign |
Het |
Rabgap1l |
A |
T |
1: 160,549,739 (GRCm39) |
V289D |
probably damaging |
Het |
Slc50a1 |
T |
C |
3: 89,177,408 (GRCm39) |
D40G |
possibly damaging |
Het |
Slco6b1 |
T |
C |
1: 96,875,310 (GRCm39) |
|
noncoding transcript |
Het |
Smarcad1 |
T |
A |
6: 65,069,510 (GRCm39) |
F530Y |
probably damaging |
Het |
Spag6 |
A |
G |
2: 18,747,684 (GRCm39) |
|
probably benign |
Het |
Supt16 |
A |
T |
14: 52,415,598 (GRCm39) |
I379N |
possibly damaging |
Het |
Tmem154 |
A |
G |
3: 84,591,567 (GRCm39) |
N39S |
probably benign |
Het |
Ubash3b |
T |
A |
9: 40,948,775 (GRCm39) |
Y180F |
probably damaging |
Het |
Usp48 |
T |
A |
4: 137,366,606 (GRCm39) |
D921E |
possibly damaging |
Het |
Zdhhc20 |
T |
C |
14: 58,076,556 (GRCm39) |
T366A |
probably benign |
Het |
Zfp456 |
A |
T |
13: 67,514,450 (GRCm39) |
C419S |
probably damaging |
Het |
Zfp69 |
T |
C |
4: 120,788,281 (GRCm39) |
T345A |
probably benign |
Het |
|
Other mutations in Gad1-ps |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00963:Gad1-ps
|
APN |
10 |
99,281,310 (GRCm39) |
exon |
noncoding transcript |
|
IGL01301:Gad1-ps
|
APN |
10 |
99,281,013 (GRCm39) |
exon |
noncoding transcript |
|
IGL01394:Gad1-ps
|
APN |
10 |
99,281,424 (GRCm39) |
exon |
noncoding transcript |
|
IGL02220:Gad1-ps
|
APN |
10 |
99,281,184 (GRCm39) |
exon |
noncoding transcript |
|
IGL02240:Gad1-ps
|
APN |
10 |
99,280,820 (GRCm39) |
exon |
noncoding transcript |
|
ANU18:Gad1-ps
|
UTSW |
10 |
99,281,013 (GRCm39) |
exon |
noncoding transcript |
|
R0305:Gad1-ps
|
UTSW |
10 |
99,280,665 (GRCm39) |
exon |
noncoding transcript |
|
R0446:Gad1-ps
|
UTSW |
10 |
99,281,383 (GRCm39) |
exon |
noncoding transcript |
|
R0538:Gad1-ps
|
UTSW |
10 |
99,280,854 (GRCm39) |
exon |
noncoding transcript |
|
R1511:Gad1-ps
|
UTSW |
10 |
99,281,331 (GRCm39) |
exon |
noncoding transcript |
|
R1734:Gad1-ps
|
UTSW |
10 |
99,281,637 (GRCm39) |
exon |
noncoding transcript |
|
R1745:Gad1-ps
|
UTSW |
10 |
99,281,386 (GRCm39) |
exon |
noncoding transcript |
|
R1886:Gad1-ps
|
UTSW |
10 |
99,281,444 (GRCm39) |
exon |
noncoding transcript |
|
R3111:Gad1-ps
|
UTSW |
10 |
99,280,383 (GRCm39) |
exon |
noncoding transcript |
|
R3617:Gad1-ps
|
UTSW |
10 |
99,281,260 (GRCm39) |
exon |
noncoding transcript |
|
R5042:Gad1-ps
|
UTSW |
10 |
99,281,516 (GRCm39) |
exon |
noncoding transcript |
|
R5223:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
R5234:Gad1-ps
|
UTSW |
10 |
99,281,188 (GRCm39) |
exon |
noncoding transcript |
|
R5275:Gad1-ps
|
UTSW |
10 |
99,280,751 (GRCm39) |
exon |
noncoding transcript |
|
R5295:Gad1-ps
|
UTSW |
10 |
99,280,751 (GRCm39) |
exon |
noncoding transcript |
|
R5334:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
R5335:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
R5336:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
R5337:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
R5396:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
R5397:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
R5399:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
R5428:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
R5429:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
R5431:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
R5661:Gad1-ps
|
UTSW |
10 |
99,280,901 (GRCm39) |
exon |
noncoding transcript |
|
R5667:Gad1-ps
|
UTSW |
10 |
99,280,395 (GRCm39) |
exon |
noncoding transcript |
|
R5671:Gad1-ps
|
UTSW |
10 |
99,280,395 (GRCm39) |
exon |
noncoding transcript |
|
R5885:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
R5886:Gad1-ps
|
UTSW |
10 |
99,281,009 (GRCm39) |
exon |
noncoding transcript |
|
|
Posted On |
2016-08-02 |