Incidental Mutation 'R5381:Lgals1'
ID 424754
Institutional Source Beutler Lab
Gene Symbol Lgals1
Ensembl Gene ENSMUSG00000068220
Gene Name lectin, galactose binding, soluble 1
Synonyms Galbp, Lect14, L14, galectin-1, Gal-1
MMRRC Submission 042956-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.156) question?
Stock # R5381 (G1)
Quality Score 225
Status Validated
Chromosome 15
Chromosomal Location 78810925-78814665 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 78814223 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Aspartic acid to Glycine at position 96 (D96G)
Ref Sequence ENSEMBL: ENSMUSP00000086795 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000089377] [ENSMUST00000138880] [ENSMUST00000229159]
AlphaFold P16045
PDB Structure Crystal structure of mouse galectin-1 [X-RAY DIFFRACTION]
Predicted Effect probably benign
Transcript: ENSMUST00000041164
SMART Domains Protein: ENSMUSP00000042908
Gene: ENSMUSG00000033099

DomainStartEndE-ValueType
Pfam:Nop25 4 170 8.1e-21 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000089377
AA Change: D96G

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000086795
Gene: ENSMUSG00000068220
AA Change: D96G

DomainStartEndE-ValueType
GLECT 3 135 7.98e-54 SMART
Gal-bind_lectin 8 134 3.86e-44 SMART
Predicted Effect probably benign
Transcript: ENSMUST00000138880
SMART Domains Protein: ENSMUSP00000116103
Gene: ENSMUSG00000033099

DomainStartEndE-ValueType
Pfam:Nop25 5 156 9.4e-20 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000229159
Meta Mutation Damage Score 0.0898 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 95.1%
Validation Efficiency 100% (74/74)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The galectins are a family of beta-galactoside-binding proteins implicated in modulating cell-cell and cell-matrix interactions. This gene product may act as an autocrine negative growth factor that regulates cell proliferation. [provided by RefSeq, Jul 2008]
PHENOTYPE: Mice homozygous for a knock-out allele exhibit abnormal sensory neurons, altered immune system and delayed muscle development. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 67 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700086D15Rik G T 11: 65,044,137 (GRCm39) S19* probably null Het
4930432E11Rik A T 7: 29,262,393 (GRCm39) noncoding transcript Het
Acvr1c T C 2: 58,177,747 (GRCm39) T241A probably damaging Het
Ankmy1 T C 1: 92,804,284 (GRCm39) T900A probably benign Het
Anp32a A C 9: 62,279,459 (GRCm39) E107A probably damaging Het
Arhgef40 T C 14: 52,229,306 (GRCm39) I623T probably damaging Het
Camsap3 T A 8: 3,653,812 (GRCm39) I483N probably damaging Het
Card9 G A 2: 26,248,895 (GRCm39) L85F probably damaging Het
Cbfa2t2 T G 2: 154,365,849 (GRCm39) V353G probably damaging Het
Ccdc166 A T 15: 75,852,701 (GRCm39) L422* probably null Het
Ccdc198 T C 14: 49,470,364 (GRCm39) D185G probably damaging Het
Ccdc73 A T 2: 104,820,270 (GRCm39) N416Y probably damaging Het
Celsr2 A T 3: 108,310,073 (GRCm39) D1552E probably damaging Het
Ces1b A T 8: 93,791,647 (GRCm39) N317K probably benign Het
Col6a3 T C 1: 90,703,334 (GRCm39) R2471G unknown Het
Crocc C T 4: 140,756,622 (GRCm39) R1165H possibly damaging Het
Csmd3 T A 15: 47,604,611 (GRCm39) Y1955F probably benign Het
Ctbp1 A T 5: 33,407,034 (GRCm39) D232E probably benign Het
Cuedc1 T A 11: 88,078,812 (GRCm39) probably null Het
Dctd C T 8: 48,590,449 (GRCm39) probably benign Het
Dusp6 G A 10: 99,102,129 (GRCm39) V226I possibly damaging Het
Gpr152 A G 19: 4,192,516 (GRCm39) E19G probably damaging Het
Ighv16-1 T C 12: 114,032,593 (GRCm39) T70A probably benign Het
Igkv4-80 A C 6: 68,993,649 (GRCm39) S81A probably benign Het
Il12b C A 11: 44,298,699 (GRCm39) D51E possibly damaging Het
Il9r T G 11: 32,140,715 (GRCm39) D435A probably benign Het
Jakmip2 T C 18: 43,715,025 (GRCm39) D167G probably damaging Het
Klrd1 A G 6: 129,572,397 (GRCm39) D63G possibly damaging Het
Lactb A G 9: 66,863,297 (GRCm39) L439P probably damaging Het
Laptm5 T C 4: 130,660,969 (GRCm39) probably benign Het
Lrp8 A T 4: 107,726,307 (GRCm39) H871L probably damaging Het
Mfap4 A T 11: 61,378,756 (GRCm39) I235F probably benign Het
Muc6 G A 7: 141,217,836 (GRCm39) T2279I possibly damaging Het
Nlrp4b T A 7: 10,449,172 (GRCm39) Y91* probably null Het
Osbp2 A G 11: 3,655,593 (GRCm39) Y383H probably benign Het
Otx1 C A 11: 21,947,037 (GRCm39) A91S probably damaging Het
Palb2 G T 7: 121,727,636 (GRCm39) T78K probably benign Het
Panx2 G T 15: 88,944,433 (GRCm39) V53L probably damaging Het
Pip4p1 T C 14: 51,166,495 (GRCm39) E161G probably benign Het
Pitx1 T C 13: 55,973,892 (GRCm39) Y313C probably damaging Het
Pjvk A G 2: 76,481,904 (GRCm39) probably null Het
Pnldc1 T G 17: 13,109,283 (GRCm39) K439T probably benign Het
Ppp4r4 A C 12: 103,559,357 (GRCm39) T513P probably benign Het
Pram1 A T 17: 33,860,600 (GRCm39) Q389L probably damaging Het
Prg4 T C 1: 150,330,204 (GRCm39) probably benign Het
Prkch C A 12: 73,738,366 (GRCm39) R158S probably damaging Het
Ptpn7 A T 1: 135,070,906 (GRCm39) M332L probably damaging Het
Rad51c A T 11: 87,288,459 (GRCm39) D241E probably benign Het
Rara T G 11: 98,862,410 (GRCm39) I270M possibly damaging Het
Ryr2 T A 13: 11,571,544 (GRCm39) D4898V probably damaging Het
Sec31b C T 19: 44,522,810 (GRCm39) G218S probably damaging Het
Slc9a1 T A 4: 133,149,382 (GRCm39) L736Q probably damaging Het
Slco2a1 A T 9: 102,945,213 (GRCm39) D196V probably damaging Het
Sp3 C A 2: 72,800,910 (GRCm39) A368S probably benign Het
Stk24 A T 14: 121,531,645 (GRCm39) L337Q possibly damaging Het
Tbc1d13 A G 2: 30,027,379 (GRCm39) T96A probably benign Het
Tm2d3 G A 7: 65,351,420 (GRCm39) G225S probably damaging Het
Urb2 T C 8: 124,756,651 (GRCm39) V786A probably benign Het
Usp32 C T 11: 84,949,953 (GRCm39) probably benign Het
Usp54 C T 14: 20,636,144 (GRCm39) G300D probably damaging Het
Vmn1r124 T A 7: 20,994,323 (GRCm39) N74Y probably damaging Het
Vmn1r77 T A 7: 11,775,952 (GRCm39) C175S probably damaging Het
Vmn2r62 G T 7: 42,437,219 (GRCm39) Q422K probably benign Het
Vmn2r76 A G 7: 85,874,496 (GRCm39) F827S probably damaging Het
Vps52 A G 17: 34,177,275 (GRCm39) S106G possibly damaging Het
Zdhhc1 CGGGGG CGGGGGG 8: 106,210,376 (GRCm39) probably null Het
Zic2 A G 14: 122,713,227 (GRCm39) N47S probably damaging Het
Other mutations in Lgals1
AlleleSourceChrCoordTypePredicted EffectPPH Score
R6925:Lgals1 UTSW 15 78,812,240 (GRCm39) missense possibly damaging 0.53
R8082:Lgals1 UTSW 15 78,814,301 (GRCm39) missense probably benign 0.15
R9789:Lgals1 UTSW 15 78,813,930 (GRCm39) missense probably benign
Predicted Primers PCR Primer
(F):5'- TGGGCAATATGGTCAGAGCC -3'
(R):5'- CTCTTTGGCCTGGAAAGCAC -3'

Sequencing Primer
(F):5'- CAGAGGCTGACCATTCCCTG -3'
(R):5'- CCCATGAAAGGGCTGGATTATG -3'
Posted On 2016-08-04