Incidental Mutation 'R4872:Vmn2r129'
ID 426174
Institutional Source Beutler Lab
Gene Symbol Vmn2r129
Ensembl Gene ENSMUSG00000057021
Gene Name vomeronasal 2, receptor 129
Synonyms Vmn2r-ps160, Vmn2r-ps159, V2r9, V2r8
MMRRC Submission 042482-MU
Accession Numbers
Essential gene? Possibly essential (E-score: 0.701) question?
Stock # R4872 (G1)
Quality Score 27
Status Validated
Chromosome 4
Chromosomal Location 156683398-156691794 bp(+) (GRCm39)
Type of Mutation exon
DNA Base Change (assembly) G to T at 156686692 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Gene Model predicted gene model for transcript(s):
AlphaFold A0A3Q4EIC8
Predicted Effect noncoding transcript
Transcript: ENSMUST00000074107
SMART Domains Protein: ENSMUSP00000128975
Gene: ENSMUSG00000057021

DomainStartEndE-ValueType
signal peptide 1 24 N/A INTRINSIC
Pfam:ANF_receptor 76 423 1.4e-32 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000096792
SMART Domains Protein: ENSMUSP00000094554
Gene: ENSMUSG00000057021

DomainStartEndE-ValueType
signal peptide 1 24 N/A INTRINSIC
Pfam:ANF_receptor 76 441 3.7e-31 PFAM
Pfam:NCD3G 510 563 1.4e-20 PFAM
Pfam:7tm_3 596 831 1.9e-56 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000189559
Meta Mutation Damage Score 0.0869 question?
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.5%
  • 10x: 96.9%
  • 20x: 94.1%
Validation Efficiency 98% (81/83)
Allele List at MGI
Other mutations in this stock
Total: 73 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcd2 C A 15: 91,075,514 (GRCm39) V100L probably benign Het
Acad11 G A 9: 103,963,465 (GRCm39) probably benign Het
Actb C T 5: 142,891,307 (GRCm39) probably benign Het
Ano9 G A 7: 140,687,117 (GRCm39) A374V probably damaging Het
Baz2b T C 2: 59,773,103 (GRCm39) probably null Het
Bltp3a G T 17: 28,109,110 (GRCm39) D1110Y probably benign Het
Bpifb9b T A 2: 154,155,551 (GRCm39) L350Q probably damaging Het
Cd27 T A 6: 125,211,281 (GRCm39) probably null Het
Cd72 A G 4: 43,449,563 (GRCm39) probably benign Het
Cdadc1 A T 14: 59,801,973 (GRCm39) S516T probably benign Het
Chst5 T A 8: 112,617,192 (GRCm39) I143F possibly damaging Het
Col20a1 T C 2: 180,639,156 (GRCm39) V452A possibly damaging Het
Cox11 C A 11: 90,535,229 (GRCm39) Q227K probably benign Het
Cpa6 A G 1: 10,665,843 (GRCm39) probably null Het
Dnase1l1 C T X: 73,320,644 (GRCm39) probably null Het
Dpm2 T C 2: 32,461,203 (GRCm39) probably benign Het
Dync1h1 C A 12: 110,624,560 (GRCm39) T3700N probably damaging Het
Frem1 A C 4: 82,881,387 (GRCm39) N1273K probably damaging Het
Fry T C 5: 150,317,704 (GRCm39) probably null Het
Gm10306 G T 4: 94,445,069 (GRCm39) probably benign Het
Gm5565 T C 5: 146,094,913 (GRCm39) T278A probably benign Het
Gm8180 A G 14: 44,019,802 (GRCm39) I40T probably benign Het
Iah1 T C 12: 21,367,426 (GRCm39) V44A probably benign Het
Iqgap3 C T 3: 88,020,435 (GRCm39) P360S probably damaging Het
Klhl28 T A 12: 65,003,896 (GRCm39) I206F possibly damaging Het
Krt13 A G 11: 100,012,332 (GRCm39) probably benign Het
Lipo2 T A 19: 33,726,914 (GRCm39) D41V probably benign Het
Lrig2 C G 3: 104,398,842 (GRCm39) V229L possibly damaging Het
Lrrc32 C T 7: 98,147,727 (GRCm39) T169I probably damaging Het
Lrriq1 T C 10: 103,014,649 (GRCm39) N1053S possibly damaging Het
Mfng C T 15: 78,648,588 (GRCm39) R163H probably benign Het
Mgat4c G C 10: 102,224,599 (GRCm39) R271P probably damaging Het
Mylk A G 16: 34,735,360 (GRCm39) N780S possibly damaging Het
N4bp1 T C 8: 87,587,676 (GRCm39) T421A probably benign Het
Nat8f1 T C 6: 85,887,295 (GRCm39) T222A probably benign Het
Nsun2 T C 13: 69,691,992 (GRCm39) probably benign Het
Oas2 T A 5: 120,876,599 (GRCm39) D448V probably damaging Het
Or10al7 C A 17: 38,366,467 (GRCm39) V6F probably benign Het
Or2l13b A T 16: 19,349,383 (GRCm39) C96S probably damaging Het
Or5ak22 T C 2: 85,230,772 (GRCm39) Y35C probably damaging Het
Pgm2l1 T A 7: 99,877,204 (GRCm39) L25Q probably damaging Het
Pigp A T 16: 94,166,309 (GRCm39) V133D probably benign Het
Pnkp C T 7: 44,511,827 (GRCm39) S113L probably damaging Het
Pomt2 C T 12: 87,156,881 (GRCm39) D752N possibly damaging Het
Ppat T C 5: 77,074,640 (GRCm39) K65E probably damaging Het
Ptprn2 T C 12: 117,125,314 (GRCm39) L616P probably damaging Het
Rad54l2 A G 9: 106,595,091 (GRCm39) S289P probably damaging Het
Rbm39 G A 2: 156,019,266 (GRCm39) R31C possibly damaging Het
Rhbdf2 C A 11: 116,492,771 (GRCm39) V417L probably benign Het
Rnf157 T A 11: 116,246,298 (GRCm39) E255D possibly damaging Het
Rpl6l A T 10: 110,962,304 (GRCm39) noncoding transcript Het
Sec24c A G 14: 20,743,813 (GRCm39) D1006G probably damaging Het
Sh3bp1 G T 15: 78,792,237 (GRCm39) A401S probably benign Het
Slc17a8 A T 10: 89,412,367 (GRCm39) D539E probably benign Het
Slc38a9 T A 13: 112,826,098 (GRCm39) S136R probably damaging Het
Smoc2 A C 17: 14,589,295 (GRCm39) T255P probably benign Het
Smyd2 T C 1: 189,628,847 (GRCm39) D152G probably damaging Het
Stab1 A G 14: 30,862,350 (GRCm39) V2328A probably damaging Het
Taar2 A G 10: 23,816,591 (GRCm39) I44V probably benign Het
Tbc1d4 T C 14: 101,682,144 (GRCm39) K1251E probably benign Het
Thada G A 17: 84,754,027 (GRCm39) L315F probably damaging Het
Trbv14 T C 6: 41,112,259 (GRCm39) S19P probably benign Het
Ttc39c T C 18: 12,820,173 (GRCm39) probably benign Het
Ttc39d A G 17: 80,524,527 (GRCm39) I395M probably benign Het
Ttn T C 2: 76,548,728 (GRCm39) E31891G probably damaging Het
Ubr3 T C 2: 69,800,527 (GRCm39) V950A probably damaging Het
Usp9y T A Y: 1,307,920 (GRCm39) K2305N probably damaging Het
Vmn1r158 G A 7: 22,490,179 (GRCm39) T10I possibly damaging Het
Vmn2r78 T A 7: 86,603,916 (GRCm39) I698K possibly damaging Het
Vmn2r86 G T 10: 130,289,460 (GRCm39) T145K probably damaging Het
Zfp51 T C 17: 21,684,933 (GRCm39) V516A probably benign Het
Zfp654 A T 16: 64,606,145 (GRCm39) S686T probably benign Het
Zfp846 T A 9: 20,502,111 (GRCm39) C55S probably benign Het
Other mutations in Vmn2r129
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00977:Vmn2r129 APN 4 156,686,491 (GRCm39) exon noncoding transcript
IGL00990:Vmn2r129 APN 4 156,686,692 (GRCm39) exon noncoding transcript
IGL00990:Vmn2r129 APN 4 156,686,558 (GRCm39) exon noncoding transcript
IGL00990:Vmn2r129 APN 4 156,690,755 (GRCm39) exon noncoding transcript
IGL00990:Vmn2r129 APN 4 156,690,730 (GRCm39) exon noncoding transcript
IGL00990:Vmn2r129 APN 4 156,690,441 (GRCm39) splice site noncoding transcript
IGL00990:Vmn2r129 APN 4 156,690,779 (GRCm39) exon noncoding transcript
IGL00990:Vmn2r129 APN 4 156,686,857 (GRCm39) exon noncoding transcript
IGL01018:Vmn2r129 APN 4 156,687,885 (GRCm39) intron noncoding transcript
IGL01018:Vmn2r129 APN 4 156,686,558 (GRCm39) exon noncoding transcript
IGL01018:Vmn2r129 APN 4 156,690,730 (GRCm39) exon noncoding transcript
IGL01018:Vmn2r129 APN 4 156,690,441 (GRCm39) splice site noncoding transcript
IGL01018:Vmn2r129 APN 4 156,686,900 (GRCm39) exon noncoding transcript
IGL01829:Vmn2r129 APN 4 156,685,614 (GRCm39) intron noncoding transcript
IGL01863:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01864:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01865:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01866:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01868:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01869:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01872:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01873:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01876:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01877:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01878:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01879:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01880:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01884:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01885:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01886:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01887:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01888:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01890:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01891:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01893:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01894:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01896:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01897:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01898:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01899:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01901:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01902:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01903:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01904:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01905:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01906:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01907:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01908:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01909:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01913:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01915:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01916:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01917:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01918:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01919:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01920:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01921:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01922:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01923:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01927:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01928:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01929:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01930:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01931:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01932:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01935:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01937:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01939:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01941:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01942:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01944:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01945:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01946:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01949:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01953:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01954:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01956:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL01957:Vmn2r129 APN 4 156,690,549 (GRCm39) exon noncoding transcript
IGL02270:Vmn2r129 APN 4 156,686,950 (GRCm39) exon noncoding transcript
R1746:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R1870:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R2147:Vmn2r129 UTSW 4 156,687,014 (GRCm39) critical splice donor site noncoding transcript
R2168:Vmn2r129 UTSW 4 156,690,673 (GRCm39) exon noncoding transcript
R2345:Vmn2r129 UTSW 4 156,689,334 (GRCm39) splice site noncoding transcript
R2510:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R2899:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R3106:Vmn2r129 UTSW 4 156,685,730 (GRCm39) intron noncoding transcript
R3122:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R3405:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R3430:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R3732:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R3751:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R4108:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R4112:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R4120:Vmn2r129 UTSW 4 156,686,778 (GRCm39) exon noncoding transcript
R4135:Vmn2r129 UTSW 4 156,691,085 (GRCm39) exon noncoding transcript
R4302:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R4475:Vmn2r129 UTSW 4 156,691,085 (GRCm39) exon noncoding transcript
R4840:Vmn2r129 UTSW 4 156,685,733 (GRCm39) intron noncoding transcript
R5144:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R5271:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
R5625:Vmn2r129 UTSW 4 156,686,505 (GRCm39) exon noncoding transcript
R5775:Vmn2r129 UTSW 4 156,686,692 (GRCm39) exon noncoding transcript
Predicted Primers PCR Primer
(F):5'- GCAGATATACATGACAAGGGCTAC -3'
(R):5'- GCAGTGATGTCCATTCCAAGG -3'

Sequencing Primer
(F):5'- ATGACATCTTCAGCAAAGGTTG -3'
(R):5'- CAGTGATGTCCATTCCAAGGTGTTG -3'
Posted On 2016-08-16