Incidental Mutation 'R4778:Vmn1r41'
ID426213
Institutional Source Beutler Lab
Gene Symbol Vmn1r41
Ensembl Gene ENSMUSG00000094586
Gene Namevomeronasal 1 receptor 41
SynonymsV1rb9
MMRRC Submission 042414-MU
Accession Numbers
Is this an essential gene? Probably non essential (E-score: 0.058) question?
Stock #R4778 (G1)
Quality Score38
Status Validated
Chromosome6
Chromosomal Location89740766-89747645 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) A to C at 89747275 bp
ZygosityHeterozygous
Amino Acid Change Lysine to Threonine at position 266 (K266T)
Ref Sequence ENSEMBL: ENSMUSP00000154326 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000089417] [ENSMUST00000204949] [ENSMUST00000226337] [ENSMUST00000226562] [ENSMUST00000227039] [ENSMUST00000227630] [ENSMUST00000228068]
Predicted Effect probably damaging
Transcript: ENSMUST00000089417
AA Change: K266T

PolyPhen 2 Score 0.988 (Sensitivity: 0.73; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000100705
Gene: ENSMUSG00000094553
AA Change: K266T

DomainStartEndE-ValueType
Pfam:V1R 39 303 9.8e-139 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000204949
AA Change: K266T

PolyPhen 2 Score 0.990 (Sensitivity: 0.72; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000145199
Gene: ENSMUSG00000094586
AA Change: K266T

DomainStartEndE-ValueType
Pfam:V1R 39 303 9.8e-139 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000226337
Predicted Effect probably benign
Transcript: ENSMUST00000226562
Predicted Effect unknown
Transcript: ENSMUST00000227039
AA Change: Q82H
Predicted Effect unknown
Transcript: ENSMUST00000227630
AA Change: Q82H
Predicted Effect probably damaging
Transcript: ENSMUST00000228068
AA Change: K266T

PolyPhen 2 Score 0.990 (Sensitivity: 0.72; Specificity: 0.97)
Meta Mutation Damage Score 0.034 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.5%
  • 10x: 96.9%
  • 20x: 94.3%
Validation Efficiency 98% (54/55)
Allele List at MGI
Other mutations in this stock
Total: 48 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
0610037L13Rik T C 4: 107,891,998 V64A probably damaging Het
4932438A13Rik T A 3: 36,937,065 M897K possibly damaging Het
Abcc10 T C 17: 46,304,416 N1349S probably damaging Het
AF529169 T A 9: 89,603,102 I81F probably damaging Het
Ahnak T C 19: 9,011,975 V3541A possibly damaging Het
Arhgap33 T A 7: 30,532,093 T156S probably benign Het
Card11 G T 5: 140,883,782 probably null Het
Cdh3 T A 8: 106,543,826 I445N probably damaging Het
Csrp3 T G 7: 48,832,563 K169N probably damaging Het
Cyp2c69 T C 19: 39,877,594 N185S probably benign Het
Dpysl3 C T 18: 43,354,802 V159I probably benign Het
Erc1 A T 6: 119,797,337 probably null Het
Fat1 T C 8: 45,038,326 V3808A probably benign Het
Fbxw19 T C 9: 109,494,646 D87G probably damaging Het
Gm1123 T C 9: 99,018,507 I99V probably benign Het
Gm11677 C T 11: 111,724,711 noncoding transcript Het
Gm5045 T A 15: 59,211,403 noncoding transcript Het
Hand1 T C 11: 57,831,623 D55G possibly damaging Het
Lrguk T A 6: 34,056,080 I227K probably damaging Het
Mdn1 C T 4: 32,683,583 R726* probably null Het
Myo16 T A 8: 10,569,694 V1415E probably damaging Het
Myof T C 19: 37,949,563 D901G probably damaging Het
Naip1 A G 13: 100,426,648 Y670H probably damaging Het
Nmd3 T A 3: 69,731,591 Y171* probably null Het
Notch4 C T 17: 34,582,511 A1111V possibly damaging Het
Nphp4 T A 4: 152,556,291 D1038E probably benign Het
Olfr484 A T 7: 108,124,480 I261N possibly damaging Het
Olfr694 A C 7: 106,689,667 S21R probably damaging Het
Osbpl10 C T 9: 115,109,530 S86L probably damaging Het
Pcsk6 G A 7: 65,959,145 G252R probably damaging Het
Pole T G 5: 110,330,832 H15Q probably benign Het
Pstpip1 A G 9: 56,128,620 D383G possibly damaging Het
Ptprq T C 10: 107,591,022 T1551A probably benign Het
Rasgrf2 A G 13: 91,983,661 F626L probably damaging Het
Retreg1 C A 15: 25,971,785 N394K possibly damaging Het
Rpp14 T A 14: 8,090,203 D42E probably benign Het
Rrp8 T A 7: 105,737,274 probably benign Het
Rufy4 T C 1: 74,147,663 C537R probably damaging Het
Snx1 T C 9: 66,101,416 probably benign Het
Stau1 A T 2: 166,963,522 N51K probably benign Het
Tdrd5 T A 1: 156,255,587 D960V probably damaging Het
Tex10 T C 4: 48,436,468 D750G probably damaging Het
Tmem43 T C 6: 91,482,255 V236A probably damaging Het
Tmem89 T C 9: 108,915,375 V112A probably damaging Het
Traf7 C G 17: 24,510,438 probably benign Het
Vmn2r65 T C 7: 84,943,593 K469E possibly damaging Het
Zfp831 A G 2: 174,646,807 T1092A possibly damaging Het
Zfp981 T A 4: 146,537,655 S346T probably benign Het
Other mutations in Vmn1r41
AlleleSourceChrCoordTypePredicted EffectPPH Score
R6889:Vmn1r41 UTSW 6 89747370 missense probably damaging 0.99
R6892:Vmn1r41 UTSW 6 89747181 missense possibly damaging 0.50
R7221:Vmn1r41 UTSW 6 89747052 missense probably benign 0.00
R7506:Vmn1r41 UTSW 6 89747177 nonsense probably null
Predicted Primers PCR Primer
(F):5'- GTACATGGTGGCTCTCCTATG -3'
(R):5'- AATGTTCCCACATGCCATGAC -3'

Sequencing Primer
(F):5'- CTCCTATGGAGGCACAAGAAGC -3'
(R):5'- ATGACCCGTAGCTCTGATGG -3'
Posted On2016-08-25