Incidental Mutation 'R5409:Cenpm'
ID 426466
Institutional Source Beutler Lab
Gene Symbol Cenpm
Ensembl Gene ENSMUSG00000068101
Gene Name centromere protein M
Synonyms 2610019I03Rik
MMRRC Submission 042978-MU
Accession Numbers
Essential gene? Not available question?
Stock # R5409 (G1)
Quality Score 190
Status Not validated
Chromosome 15
Chromosomal Location 82117980-82128949 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to C at 82118564 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 153 (T153A)
Ref Sequence ENSEMBL: ENSMUSP00000086558 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000089155] [ENSMUST00000089157] [ENSMUST00000230408]
AlphaFold Q9CQA0
Predicted Effect probably benign
Transcript: ENSMUST00000089155
AA Change: T153A

PolyPhen 2 Score 0.000 (Sensitivity: 1.00; Specificity: 0.00)
SMART Domains Protein: ENSMUSP00000086558
Gene: ENSMUSG00000068101
AA Change: T153A

DomainStartEndE-ValueType
Pfam:CENP-M 1 118 1.7e-56 PFAM
Predicted Effect probably benign
Transcript: ENSMUST00000089157
SMART Domains Protein: ENSMUSP00000086560
Gene: ENSMUSG00000068101

DomainStartEndE-ValueType
Pfam:CENP-M 1 172 1.1e-83 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000229041
Predicted Effect noncoding transcript
Transcript: ENSMUST00000229505
Predicted Effect probably benign
Transcript: ENSMUST00000230408
Predicted Effect noncoding transcript
Transcript: ENSMUST00000230791
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.1%
  • 20x: 94.8%
Validation Efficiency
MGI Phenotype FUNCTION: This gene encodes a protein that is present in the nucleus of actively growing cells but is excluded from the nucleus during cell division or during growth arrest as a result of contact inhibition. In human, this protein is a component of the CENP-A nucleosome-associated complex that regulates kinetochore protein assembly, mitotic cell-cycle progression, and chromosome segregation. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 38 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca7 T C 10: 79,850,154 (GRCm39) L2002P probably damaging Het
Acot11 C T 4: 106,617,327 (GRCm39) G240R probably damaging Het
Adgrl1 A G 8: 84,656,371 (GRCm39) T230A probably damaging Het
Anapc4 A G 5: 53,005,941 (GRCm39) E316G probably damaging Het
Asic1 GCACC GCACCACC 15: 99,596,684 (GRCm39) probably benign Het
Aurka T G 2: 172,209,036 (GRCm39) Q33P possibly damaging Het
Ccn5 G A 2: 163,667,158 (GRCm39) C53Y probably damaging Het
Clca4b T A 3: 144,622,452 (GRCm39) K538* probably null Het
Clip2 G A 5: 134,551,645 (GRCm39) T159M possibly damaging Het
Col5a1 C T 2: 27,850,457 (GRCm39) T518I unknown Het
Dis3 A T 14: 99,323,368 (GRCm39) M566K possibly damaging Het
Dnah1 C T 14: 30,985,212 (GRCm39) R3869H probably damaging Het
Gm4775 A T 14: 106,338,386 (GRCm39) noncoding transcript Het
Hipk2 C T 6: 38,706,977 (GRCm39) G637D probably damaging Het
Igkv4-61 T C 6: 69,394,111 (GRCm39) K18E possibly damaging Het
Kcnk4 A G 19: 6,903,578 (GRCm39) S324P probably benign Het
Larp4 T C 15: 99,883,945 (GRCm39) C61R probably damaging Het
Nid2 T C 14: 19,856,030 (GRCm39) F986L probably damaging Het
Or5ac16 A G 16: 59,021,920 (GRCm39) Y290H probably damaging Het
Or5aq1b T C 2: 86,902,214 (GRCm39) E88G possibly damaging Het
Or5h22 C T 16: 58,894,559 (GRCm39) V295I possibly damaging Het
Pgbd5 T A 8: 125,098,619 (GRCm39) I359F probably damaging Het
Plekhh2 T C 17: 84,893,906 (GRCm39) probably null Het
Pomgnt2 A T 9: 121,811,303 (GRCm39) S493T possibly damaging Het
Rnf7l A T 10: 63,257,403 (GRCm39) M39K possibly damaging Het
Rp1l1 T C 14: 64,268,070 (GRCm39) S1219P probably benign Het
Rprd1b T A 2: 157,916,987 (GRCm39) F322L probably damaging Het
Sh3rf1 G A 8: 61,827,279 (GRCm39) V678M probably benign Het
Smpd5 C A 15: 76,179,914 (GRCm39) T321K probably damaging Het
Spag8 T A 4: 43,653,134 (GRCm39) probably benign Het
Tanc2 T C 11: 105,758,311 (GRCm39) C691R possibly damaging Het
Tnc A C 4: 63,884,773 (GRCm39) M1834R probably damaging Het
Tnc A T 4: 63,925,654 (GRCm39) Y961N probably damaging Het
Ttn T C 2: 76,700,893 (GRCm39) probably benign Het
Ufl1 A G 4: 25,280,706 (GRCm39) V47A probably damaging Het
Unc13c T A 9: 73,485,672 (GRCm39) D1676V possibly damaging Het
Vmn1r65 T C 7: 6,012,012 (GRCm39) N74S possibly damaging Het
Vmn2r30 A G 7: 7,315,547 (GRCm39) F762S probably damaging Het
Other mutations in Cenpm
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL03189:Cenpm APN 15 82,118,634 (GRCm39) missense possibly damaging 0.57
R0801:Cenpm UTSW 15 82,118,667 (GRCm39) missense probably benign 0.36
R1842:Cenpm UTSW 15 82,123,565 (GRCm39) missense probably benign 0.02
R1878:Cenpm UTSW 15 82,118,616 (GRCm39) missense probably benign 0.00
R3961:Cenpm UTSW 15 82,118,574 (GRCm39) missense possibly damaging 0.94
R5525:Cenpm UTSW 15 82,123,492 (GRCm39) critical splice donor site probably null
R7548:Cenpm UTSW 15 82,128,880 (GRCm39) start codon destroyed probably null 1.00
R7562:Cenpm UTSW 15 82,125,562 (GRCm39) missense probably benign 0.01
Predicted Primers
Posted On 2016-09-01