Incidental Mutation 'R5442:Or5m3b'
| ID |
427211 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or5m3b
|
| Ensembl Gene |
ENSMUSG00000045392 |
| Gene Name |
olfactory receptor family 5 subfamily M member 3B |
| Synonyms |
GA_x6K02T2Q125-47516301-47517233, Olfr1033, MOR199-2 |
| MMRRC Submission |
043007-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.065)
|
| Stock # |
R5442 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
2 |
| Chromosomal Location |
85850984-85875152 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 85872295 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Valine to Alanine
at position 212
(V212A)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000151539
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000111589]
[ENSMUST00000213496]
[ENSMUST00000213774]
[ENSMUST00000213865]
[ENSMUST00000214546]
[ENSMUST00000215682]
[ENSMUST00000218397]
|
| AlphaFold |
Q8VFK5 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000111589
AA Change: V212A
PolyPhen 2
Score 0.295 (Sensitivity: 0.91; Specificity: 0.89)
|
| SMART Domains |
Protein: ENSMUSP00000107216
Gene: ENSMUSG00000042796
AA Change: V212A
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
29 |
306 |
2.4e-50 |
PFAM |
|
Pfam:7tm_1
|
39 |
288 |
3.5e-21 |
PFAM |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000213364
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000213496
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000213774
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000213865
AA Change: V212A
PolyPhen 2
Score 0.295 (Sensitivity: 0.91; Specificity: 0.89)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000214546
AA Change: V212A
PolyPhen 2
Score 0.295 (Sensitivity: 0.91; Specificity: 0.89)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000215682
AA Change: V212A
PolyPhen 2
Score 0.295 (Sensitivity: 0.91; Specificity: 0.89)
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000218397
AA Change: V212A
PolyPhen 2
Score 0.295 (Sensitivity: 0.91; Specificity: 0.89)
|
| Coding Region Coverage |
- 1x: 99.2%
- 3x: 98.5%
- 10x: 96.9%
- 20x: 94.3%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 37 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Aatk |
A |
G |
11: 119,909,594 (GRCm39) |
M114T |
probably benign |
Het |
| Ablim3 |
A |
T |
18: 61,990,296 (GRCm39) |
|
probably null |
Het |
| Adcy10 |
A |
G |
1: 165,340,709 (GRCm39) |
D238G |
probably benign |
Het |
| Astn2 |
G |
T |
4: 65,500,023 (GRCm39) |
S955R |
possibly damaging |
Het |
| Casc3 |
A |
G |
11: 98,712,297 (GRCm39) |
E112G |
probably damaging |
Het |
| Cetn4 |
C |
T |
3: 37,364,094 (GRCm39) |
V39I |
probably benign |
Het |
| Commd4 |
A |
G |
9: 57,064,090 (GRCm39) |
V37A |
possibly damaging |
Het |
| Dyrk2 |
T |
C |
10: 118,696,643 (GRCm39) |
Q205R |
possibly damaging |
Het |
| Gal3st4 |
A |
G |
5: 138,264,042 (GRCm39) |
V319A |
possibly damaging |
Het |
| Inpp5d |
G |
A |
1: 87,645,788 (GRCm39) |
A1058T |
probably benign |
Het |
| Lpin3 |
A |
G |
2: 160,746,936 (GRCm39) |
Y781C |
probably damaging |
Het |
| Lrat |
C |
T |
3: 82,810,527 (GRCm39) |
V165M |
probably damaging |
Het |
| Ltbr |
G |
A |
6: 125,289,757 (GRCm39) |
R146W |
probably damaging |
Het |
| Nlrp6 |
T |
C |
7: 140,502,103 (GRCm39) |
S142P |
probably benign |
Het |
| Oas1a |
T |
C |
5: 121,035,269 (GRCm39) |
T349A |
probably benign |
Het |
| Or52e8 |
A |
T |
7: 104,624,435 (GRCm39) |
F252L |
possibly damaging |
Het |
| Or5v1 |
A |
T |
17: 37,810,330 (GRCm39) |
I263F |
probably damaging |
Het |
| Or8c20 |
T |
A |
9: 38,261,158 (GRCm39) |
S260T |
probably benign |
Het |
| Pakap |
C |
A |
4: 57,637,876 (GRCm39) |
P18Q |
probably null |
Het |
| Pcdha2 |
T |
C |
18: 37,072,915 (GRCm39) |
V182A |
probably benign |
Het |
| Phactr3 |
A |
G |
2: 177,784,254 (GRCm39) |
D26G |
probably benign |
Het |
| Phrf1 |
G |
A |
7: 140,820,850 (GRCm39) |
R159H |
probably damaging |
Het |
| R3hdm4 |
C |
T |
10: 79,748,292 (GRCm39) |
E162K |
possibly damaging |
Het |
| Rab3ip |
T |
C |
10: 116,754,753 (GRCm39) |
T268A |
probably benign |
Het |
| Rapgef3 |
T |
C |
15: 97,656,742 (GRCm39) |
D299G |
probably damaging |
Het |
| Rem1 |
A |
G |
2: 152,469,977 (GRCm39) |
|
probably null |
Het |
| Slc28a2b |
A |
G |
2: 122,317,350 (GRCm39) |
N36S |
probably benign |
Het |
| Syne1 |
A |
G |
10: 5,293,473 (GRCm39) |
M1286T |
probably benign |
Het |
| Thsd7a |
T |
C |
6: 12,748,799 (GRCm39) |
T52A |
probably benign |
Het |
| Tmem135 |
A |
T |
7: 88,793,872 (GRCm39) |
F390Y |
probably damaging |
Het |
| Trio |
T |
C |
15: 27,856,280 (GRCm39) |
D696G |
probably benign |
Het |
| Ttll11 |
T |
C |
2: 35,793,135 (GRCm39) |
*191W |
probably null |
Het |
| Ubr4 |
A |
G |
4: 139,135,083 (GRCm39) |
D805G |
probably damaging |
Het |
| Usp9y |
A |
G |
Y: 1,336,467 (GRCm39) |
I1469T |
possibly damaging |
Het |
| Vmn1r70 |
G |
T |
7: 10,367,877 (GRCm39) |
A122S |
possibly damaging |
Het |
| Vmn2r78 |
G |
T |
7: 86,569,330 (GRCm39) |
L74F |
possibly damaging |
Het |
| Wdfy3 |
T |
C |
5: 102,044,425 (GRCm39) |
E1860G |
probably benign |
Het |
|
| Other mutations in Or5m3b |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01647:Or5m3b
|
APN |
2 |
85,872,441 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01745:Or5m3b
|
APN |
2 |
85,872,381 (GRCm39) |
missense |
possibly damaging |
0.74 |
|
IGL02317:Or5m3b
|
APN |
2 |
85,871,913 (GRCm39) |
missense |
probably damaging |
0.99 |
|
IGL02400:Or5m3b
|
APN |
2 |
85,872,420 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0692:Or5m3b
|
UTSW |
2 |
85,872,516 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1629:Or5m3b
|
UTSW |
2 |
85,871,766 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2105:Or5m3b
|
UTSW |
2 |
85,871,674 (GRCm39) |
missense |
probably damaging |
0.97 |
|
R2288:Or5m3b
|
UTSW |
2 |
85,872,377 (GRCm39) |
nonsense |
probably null |
|
|
R4451:Or5m3b
|
UTSW |
2 |
85,872,303 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4512:Or5m3b
|
UTSW |
2 |
85,871,913 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R4878:Or5m3b
|
UTSW |
2 |
85,871,799 (GRCm39) |
missense |
probably benign |
0.08 |
|
R5867:Or5m3b
|
UTSW |
2 |
85,871,795 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7849:Or5m3b
|
UTSW |
2 |
85,871,949 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7881:Or5m3b
|
UTSW |
2 |
85,871,814 (GRCm39) |
missense |
probably benign |
0.03 |
|
Z1088:Or5m3b
|
UTSW |
2 |
85,872,063 (GRCm39) |
missense |
probably damaging |
1.00 |
|
| Predicted Primers |
PCR Primer
(F):5'- TTTCTGACTAGTCTGGCTGC -3'
(R):5'- TCAACATGGGGATCACTGTGG -3'
Sequencing Primer
(F):5'- AGTCTGGCTGCAACCTTATGGAC -3'
(R):5'- TCACTGTGGTATAGAACACAGC -3'
|
| Posted On |
2016-09-01 |
Incidental Mutation