Mutagenetix > Incidental Mutation

Incidental Mutation 'R5417:Gm14443'

427780

Institutional Source

Beutler Lab

Gene Symbol

Gm14443

Ensembl Gene

ENSMUSG00000078902

Gene Name

predicted gene 14443

Synonyms

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.080) question?

Stock #

R5417 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

175008048-175017664 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 175011796 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Cysteine to Serine at position 217 (C217S)

Ref Sequence

ENSEMBL: ENSMUSP00000104682 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000109054]

AlphaFold

A2ARX0

Predicted Effect

probably damaging
Transcript: ENSMUST00000109054
AA Change: C217S

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000104682
Gene: ENSMUSG00000078902
AA Change: C217S

Domain	Start	End	E-Value	Type
KRAB	4	66	1.9e-15	SMART
ZnF_C2H2	78	97	1.38e2	SMART
ZnF_C2H2	103	123	3.05e1	SMART
ZnF_C2H2	131	153	1.25e-1	SMART
ZnF_C2H2	159	179	7.89e0	SMART
ZnF_C2H2	187	209	2.27e-4	SMART
ZnF_C2H2	215	237	4.54e-4	SMART
ZnF_C2H2	243	265	5.99e-4	SMART
ZnF_C2H2	271	293	4.54e-4	SMART
ZnF_C2H2	299	321	5.21e-4	SMART
ZnF_C2H2	327	349	3.95e-4	SMART
ZnF_C2H2	355	377	4.24e-4	SMART
ZnF_C2H2	383	405	5.21e-4	SMART
ZnF_C2H2	411	433	5.21e-4	SMART
ZnF_C2H2	439	461	3.95e-4	SMART
ZnF_C2H2	467	489	4.24e-4	SMART
ZnF_C2H2	495	517	5.21e-4	SMART
ZnF_C2H2	523	545	3.95e-4	SMART
ZnF_C2H2	551	573	5.21e-4	SMART
ZnF_C2H2	579	601	2.27e-4	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000127251

Coding Region Coverage

1x: 99.2%
3x: 98.5%
10x: 97.0%
20x: 94.7%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 45 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Arhgap39	A	G	15: 76,619,301 (GRCm39)	V761A	possibly damaging	Het
Ccdc47	C	T	11: 106,101,176 (GRCm39)	R162Q	probably benign	Het
Cfap65	T	C	1: 74,964,259 (GRCm39)	E563G	probably damaging	Het
Clec16a	G	A	16: 10,549,543 (GRCm39)	C872Y	probably damaging	Het
Col17a1	C	A	19: 47,650,829 (GRCm39)	G732C	probably damaging	Het
Cped1	A	G	6: 22,233,579 (GRCm39)	I812V	probably null	Het
Dennd1c	CCGCCCCTCGCTGACAGC	CC	17: 57,373,755 (GRCm39)		probably null	Het
Dgkg	A	T	16: 22,407,081 (GRCm39)	M168K	possibly damaging	Het
Dnase1l1	C	T	X: 73,320,644 (GRCm39)		probably null	Het
Dolpp1	T	C	2: 30,286,249 (GRCm39)	L18P	probably damaging	Het
Eif3e	A	T	15: 43,128,917 (GRCm39)	D234E	probably benign	Het
Epha6	C	A	16: 60,245,198 (GRCm39)	A334S	possibly damaging	Het
Fbxw10	G	A	11: 62,767,990 (GRCm39)	R942Q	possibly damaging	Het
Flvcr2	T	G	12: 85,793,965 (GRCm39)	F114V	probably damaging	Het
Gphb5	A	T	12: 75,459,746 (GRCm39)	V83E	possibly damaging	Het
Gpsm1	T	C	2: 26,214,045 (GRCm39)		probably null	Het
Grik4	A	G	9: 42,582,544 (GRCm39)	F134S	probably benign	Het
Ibsp	G	A	5: 104,458,335 (GRCm39)	E291K	possibly damaging	Het
Igfals	T	G	17: 25,099,290 (GRCm39)	L127R	probably damaging	Het
Igsf9b	CGGCCCCGGCCCAG	CGGCCCCGGCCCAGGCCCCGGCCCAG	9: 27,245,572 (GRCm39)		probably benign	Het
Iqcf3	T	A	9: 106,431,413 (GRCm39)	D63V	probably damaging	Het
Klc4	A	G	17: 46,942,957 (GRCm39)		probably null	Het
Lgr6	C	T	1: 134,921,748 (GRCm39)	A199T	probably damaging	Het
Mapk8ip2	C	A	15: 89,341,642 (GRCm39)	D284E	probably benign	Het
Muc5b	A	T	7: 141,411,781 (GRCm39)	T1576S	unknown	Het
Nlrp3	G	A	11: 59,439,889 (GRCm39)	G489S	probably damaging	Het
Nr5a1	T	A	2: 38,598,098 (GRCm39)	Q233L	possibly damaging	Het
Nusap1	G	A	2: 119,477,624 (GRCm39)	V345I	probably damaging	Het
Or10q1	A	G	19: 13,727,217 (GRCm39)	H249R	probably benign	Het
Or4k51	A	G	2: 111,585,265 (GRCm39)	T224A	possibly damaging	Het
Or51aa2	A	T	7: 103,187,970 (GRCm39)	V157E	possibly damaging	Het
Oxr1	A	G	15: 41,683,767 (GRCm39)	T378A	probably benign	Het
Pcdhb12	T	C	18: 37,569,087 (GRCm39)	F78L	probably benign	Het
Pgm2l1	A	T	7: 99,921,583 (GRCm39)	I605L	probably benign	Het
Pik3c2g	A	G	6: 139,682,669 (GRCm39)	I17V	probably benign	Het
Prss39	A	G	1: 34,539,209 (GRCm39)	S150G	probably benign	Het
Scara5	CG	C	14: 65,997,111 (GRCm39)		probably null	Het
Scg3	T	A	9: 75,576,538 (GRCm39)	Y279F	probably benign	Het
Skic2	C	T	17: 35,065,574 (GRCm39)	V327I	probably damaging	Het
Srfbp1	T	C	18: 52,621,697 (GRCm39)	C253R	probably benign	Het
Tcirg1	C	T	19: 3,953,509 (GRCm39)		probably null	Het
Trim37	A	G	11: 87,057,505 (GRCm39)	Y313C	probably damaging	Het
Ttll9	A	T	2: 152,844,912 (GRCm39)	M427L	probably benign	Het
Ttn	A	T	2: 76,641,587 (GRCm39)	L5176Q	possibly damaging	Het
Tubgcp5	A	G	7: 55,475,409 (GRCm39)	R932G	possibly damaging	Het

Other mutations in Gm14443

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02248:Gm14443	APN	2	175,012,107 (GRCm39)	missense	probably benign	0.01
R0081:Gm14443	UTSW	2	175,011,729 (GRCm39)	missense	probably damaging	1.00
R1312:Gm14443	UTSW	2	175,013,383 (GRCm39)	splice site	probably benign
R1958:Gm14443	UTSW	2	175,011,497 (GRCm39)	missense	probably benign	0.31
R4061:Gm14443	UTSW	2	175,011,402 (GRCm39)	missense	probably benign	0.01
R4089:Gm14443	UTSW	2	175,013,685 (GRCm39)	missense	probably damaging	1.00
R5306:Gm14443	UTSW	2	175,011,372 (GRCm39)	missense	possibly damaging	0.63
R5405:Gm14443	UTSW	2	175,013,644 (GRCm39)	missense	possibly damaging	0.55
R6422:Gm14443	UTSW	2	175,012,174 (GRCm39)	nonsense	probably null
R7410:Gm14443	UTSW	2	175,011,069 (GRCm39)	missense	possibly damaging	0.85
R7880:Gm14443	UTSW	2	175,011,163 (GRCm39)	missense	probably benign	0.08
R7962:Gm14443	UTSW	2	175,012,035 (GRCm39)	missense	probably benign	0.01
R8081:Gm14443	UTSW	2	175,012,238 (GRCm39)	nonsense	probably null
R8174:Gm14443	UTSW	2	175,011,468 (GRCm39)	missense	probably damaging	1.00
R8315:Gm14443	UTSW	2	175,013,640 (GRCm39)	critical splice donor site	probably null
R8725:Gm14443	UTSW	2	175,010,693 (GRCm39)	nonsense	probably null
R8804:Gm14443	UTSW	2	175,011,652 (GRCm39)	missense	probably damaging	0.98
R9109:Gm14443	UTSW	2	175,011,869 (GRCm39)	nonsense	probably null
R9298:Gm14443	UTSW	2	175,011,869 (GRCm39)	nonsense	probably null
R9332:Gm14443	UTSW	2	175,017,610 (GRCm39)	start gained	probably benign
R9624:Gm14443	UTSW	2	175,012,129 (GRCm39)	missense	possibly damaging	0.92
R9766:Gm14443	UTSW	2	175,012,248 (GRCm39)	missense	probably benign	0.03

Predicted Primers

PCR Primer
(F):5'- ATTCATAAGGCTGCTCTCCTG -3'
(R):5'- TGCCAATTGTGTTTGCAGGC -3'

Sequencing Primer
(F):5'- CATAAGGCTGCTCTCCTGTATGTG -3'
(R):5'- TGTACTGCAGTGAAACCCTCTGAG -3'

Posted On

2016-09-01