Incidental Mutation 'R5448:Gm9887'
ID 429188
Institutional Source Beutler Lab
Gene Symbol Gm9887
Ensembl Gene ENSMUSG00000052673
Gene Name predicted gene 9887
Synonyms
MMRRC Submission 043013-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.141) question?
Stock # R5448 (G1)
Quality Score 121
Status Not validated
Chromosome 12
Chromosomal Location 69417258-69419242 bp(-) (GRCm39)
Type of Mutation unclassified
DNA Base Change (assembly) C to A at 69418865 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000055862 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000050063] [ENSMUST00000053451]
AlphaFold no structure available at present
PDB Structure The crystal structure of Arf6-MKLP1 (Mitotic kinesin-like protein 1) complex [X-RAY DIFFRACTION]
Predicted Effect probably benign
Transcript: ENSMUST00000050063
SMART Domains Protein: ENSMUSP00000055862
Gene: ENSMUSG00000044147

DomainStartEndE-ValueType
ARF 1 175 2.34e-134 SMART
Predicted Effect unknown
Transcript: ENSMUST00000053451
AA Change: R123L
SMART Domains Protein: ENSMUSP00000058604
Gene: ENSMUSG00000052673
AA Change: R123L

DomainStartEndE-ValueType
low complexity region 13 39 N/A INTRINSIC
low complexity region 63 105 N/A INTRINSIC
low complexity region 147 164 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000220630
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.2%
  • 20x: 95.2%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 35 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930505A04Rik C T 11: 30,376,349 (GRCm39) V173M probably damaging Het
Actn3 T C 19: 4,913,239 (GRCm39) D699G possibly damaging Het
C1galt1 C T 6: 7,866,658 (GRCm39) A168V possibly damaging Het
Ccdc180 A T 4: 45,920,913 (GRCm39) E953V probably damaging Het
Ccdc88b T A 19: 6,831,948 (GRCm39) D411V probably damaging Het
Cdadc1 T A 14: 59,811,275 (GRCm39) I412L possibly damaging Het
Clip2 T C 5: 134,542,902 (GRCm39) N424D probably benign Het
Dnase1l1 C T X: 73,320,644 (GRCm39) probably null Het
Fbxo38 A T 18: 62,655,528 (GRCm39) I386N possibly damaging Het
Itgae T C 11: 73,024,734 (GRCm39) probably null Het
Klhl2 C A 8: 65,275,642 (GRCm39) probably null Het
Krt1 T A 15: 101,757,464 (GRCm39) K249* probably null Het
L3mbtl2 T C 15: 81,568,534 (GRCm39) Y513H possibly damaging Het
Maml2 A C 9: 13,617,763 (GRCm39) S370R probably damaging Het
Or1e35 T C 11: 73,797,437 (GRCm39) N294D probably damaging Het
Or4c112 T G 2: 88,853,845 (GRCm39) L167F probably benign Het
Pcnx2 T C 8: 126,614,888 (GRCm39) T188A probably benign Het
Pde6c A G 19: 38,121,623 (GRCm39) E77G probably damaging Het
Pgr A G 9: 8,922,638 (GRCm39) I603V probably benign Het
Plce1 T C 19: 38,768,361 (GRCm39) V2212A probably damaging Het
Ppl C T 16: 4,925,430 (GRCm39) A70T probably benign Het
Prpf40a G T 2: 53,046,938 (GRCm39) T266N possibly damaging Het
Prrx1 T C 1: 163,075,867 (GRCm39) E233G probably damaging Het
Rdh16f2 C T 10: 127,712,932 (GRCm39) T310I probably benign Het
Rfx6 T C 10: 51,559,733 (GRCm39) S187P probably damaging Het
Scn10a A T 9: 119,517,013 (GRCm39) F135I probably benign Het
Shld2 G A 14: 33,990,327 (GRCm39) T193I probably benign Het
Slc24a1 A G 9: 64,855,609 (GRCm39) F433L probably benign Het
Slfn3 T A 11: 83,105,431 (GRCm39) L476Q probably damaging Het
Tmem8b G A 4: 43,673,992 (GRCm39) V208I probably benign Het
Trappc1 T C 11: 69,216,361 (GRCm39) S136P probably benign Het
Tshz3 A G 7: 36,470,654 (GRCm39) E881G possibly damaging Het
Ubash3b A G 9: 40,948,731 (GRCm39) probably null Het
Wdtc1 G A 4: 133,021,608 (GRCm39) A642V probably benign Het
Zdhhc22 T C 12: 87,035,341 (GRCm39) D37G possibly damaging Het
Other mutations in Gm9887
AlleleSourceChrCoordTypePredicted EffectPPH Score
R4863:Gm9887 UTSW 12 69,418,763 (GRCm39) unclassified probably benign
R9721:Gm9887 UTSW 12 69,418,629 (GRCm39) missense unknown
Z1176:Gm9887 UTSW 12 69,418,715 (GRCm39) missense not run
Predicted Primers PCR Primer
(F):5'- CCCACGTGTCTTCCAGGAAAC -3'
(R):5'- GTCAGGTCATGGATCCTCGC -3'

Sequencing Primer
(F):5'- TCCTAAGGGCCGACGAAG -3'
(R):5'- AAGGGAGTTACCGCCGG -3'
Posted On 2016-09-06