Mutagenetix > Incidental Mutation

Incidental Mutation 'R5396:Kyat3'

429644

Institutional Source

Beutler Lab

Gene Symbol

Kyat3

Ensembl Gene

ENSMUSG00000040213

Gene Name

kynurenine aminotransferase 3

Synonyms

Ccbl2, Kat3, KATIII

MMRRC Submission

044394-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.230) question?

Stock #

R5396 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

142406780-142450672 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 142440367 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Lysine to Glutamic Acid at position 364 (K364E)

Ref Sequence

ENSEMBL: ENSMUSP00000101825 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000044392] [ENSMUST00000106218] [ENSMUST00000129775]

AlphaFold

Q71RI9

Predicted Effect

probably benign
Transcript: ENSMUST00000044392
AA Change: K329E

PolyPhen 2 Score 0.030 (Sensitivity: 0.95; Specificity: 0.82)

SMART Domains

Protein: ENSMUSP00000041675
Gene: ENSMUSG00000040213
AA Change: K329E

Domain	Start	End	E-Value	Type
Pfam:Aminotran_1_2	29	411	5.8e-54	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000106218
AA Change: K364E

PolyPhen 2 Score 0.030 (Sensitivity: 0.95; Specificity: 0.82)

SMART Domains

Protein: ENSMUSP00000101825
Gene: ENSMUSG00000040213
AA Change: K364E

Domain	Start	End	E-Value	Type
Pfam:Aminotran_1_2	64	446	4.8e-53	PFAM

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000128096

Predicted Effect

probably benign
Transcript: ENSMUST00000129775

SMART Domains

Protein: ENSMUSP00000121687
Gene: ENSMUSG00000040213

Domain	Start	End	E-Value	Type
PDB:3E2Z\|B	7	69	3e-37	PDB
SCOP:d1gdea_	8	70	1e-7	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000137623

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000196928

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000198957

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.3%
20x: 95.5%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes an aminotransferase that transaminates kynurenine to form kynurenic acid, which is a metabolite of tryptophan. Multiple alternatively spliced transcript variants that encode different proteins have been described for this gene. This gene shares 5' exon structure with the RNA binding motif protein, X-linked-like 1 locus on chromosome 1, but the coding sequences are non-overlapping. [provided by RefSeq, Mar 2017]

Allele List at MGI

Other mutations in this stock

Total: 88 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1810024B03Rik	T	C	2: 127,028,873 (GRCm39)	T109A	probably damaging	Het
A430005L14Rik	GCC	G	4: 154,045,410 (GRCm39)		probably null	Het
Actr1a	T	C	19: 46,384,103 (GRCm39)	D5G	possibly damaging	Het
Adra2c	A	G	5: 35,438,217 (GRCm39)	T330A	probably benign	Het
Ahcyl2	C	T	6: 29,859,697 (GRCm39)		probably benign	Het
Ahnak	T	C	19: 8,984,539 (GRCm39)	V1941A	probably damaging	Het
Akr1b7	G	A	6: 34,389,411 (GRCm39)		probably null	Het
Anapc15	C	T	7: 101,547,810 (GRCm39)	P68L	probably damaging	Het
Ank2	A	G	3: 126,746,875 (GRCm39)	V570A	probably damaging	Het
Ano4	T	C	10: 88,948,702 (GRCm39)	E302G	probably damaging	Het
Bop1	A	T	15: 76,339,489 (GRCm39)	H285Q	probably damaging	Het
Btbd19	G	A	4: 116,980,957 (GRCm39)	A104V	probably damaging	Het
Catsperb	A	T	12: 101,560,543 (GRCm39)	I845L	possibly damaging	Het
Ccdc28b	G	T	4: 129,513,238 (GRCm39)	Q184K	probably damaging	Het
Cd101	A	G	3: 100,926,126 (GRCm39)	S198P	probably damaging	Het
Cdc7	A	T	5: 107,117,163 (GRCm39)		probably null	Het
Cdhr2	A	G	13: 54,884,269 (GRCm39)	D1268G	probably benign	Het
Celsr3	C	T	9: 108,705,781 (GRCm39)	R755W	probably damaging	Het
Chrnb1	T	A	11: 69,684,979 (GRCm39)	N117I	probably damaging	Het
Chst11	C	A	10: 83,027,083 (GRCm39)	P170Q	probably damaging	Het
Clca3b	A	G	3: 144,552,932 (GRCm39)	Y98H	probably damaging	Het
Crnkl1	A	G	2: 145,770,132 (GRCm39)	V237A	possibly damaging	Het
Ctnnbl1	G	A	2: 157,659,752 (GRCm39)		probably null	Het
Dbndd1	C	A	8: 124,236,582 (GRCm39)	R95S	probably damaging	Het
Ddx3y	A	G	Y: 1,265,965 (GRCm39)	V344A	probably damaging	Het
Defb30	A	T	14: 63,273,559 (GRCm39)		probably null	Het
Dennd10	T	C	19: 60,823,274 (GRCm39)	L303P	probably benign	Het
Dnah17	C	T	11: 118,018,108 (GRCm39)	R129Q	probably benign	Het
Dnhd1	A	T	7: 105,362,891 (GRCm39)	M3818L	probably benign	Het
Dusp4	G	T	8: 35,284,458 (GRCm39)	D258Y	probably damaging	Het
E2f1	A	T	2: 154,406,368 (GRCm39)	F103I	probably benign	Het
Elavl2	T	C	4: 91,149,055 (GRCm39)	Y248C	probably damaging	Het
Ephb3	T	C	16: 21,037,855 (GRCm39)	V310A	possibly damaging	Het
Erbin	A	G	13: 103,993,917 (GRCm39)		probably null	Het
Etv4	A	T	11: 101,666,167 (GRCm39)	H120Q	probably damaging	Het
Fcgbpl1	T	C	7: 27,839,608 (GRCm39)	F474L	probably benign	Het
Flot2	T	A	11: 77,940,314 (GRCm39)	C20*	probably null	Het
Fsip2	G	A	2: 82,821,262 (GRCm39)	G5665D	probably benign	Het
Gad1-ps	G	A	10: 99,281,009 (GRCm39)		noncoding transcript	Het
Glrp1	TTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGTTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGTTGGTGCTGCTGGTGCTGCTG	TTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGTTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGTGCTGTTGGTGCTGCTGGTGCTGCTG	1: 88,431,066 (GRCm39)		probably benign	Het
Gm43302	A	T	5: 105,427,955 (GRCm39)	L202*	probably null	Het
Gm4787	G	C	12: 81,424,604 (GRCm39)	T518S	probably benign	Het
Hnf1b	A	T	11: 83,746,863 (GRCm39)	M160L	probably damaging	Het
Inhbe	T	C	10: 127,186,470 (GRCm39)	T237A	possibly damaging	Het
Kdm5b	G	A	1: 134,549,836 (GRCm39)		probably null	Het
Kmt2c	A	T	5: 25,499,732 (GRCm39)		probably null	Het
Lars1	T	A	18: 42,350,024 (GRCm39)	T927S	probably benign	Het
Mfap1b	A	T	2: 121,304,371 (GRCm39)	M8K	probably benign	Het
Mroh8	G	A	2: 157,070,576 (GRCm39)	P592S	possibly damaging	Het
Myo3b	A	T	2: 69,957,329 (GRCm39)	I185L	probably damaging	Het
Or1e16	AGCGGTCGTAGGC	AGC	11: 73,286,480 (GRCm39)		probably null	Het
Or1x6	C	T	11: 50,939,297 (GRCm39)	A121V	probably damaging	Het
Or4c110	A	T	2: 88,832,540 (GRCm39)	L31M	probably benign	Het
Or51a24	T	C	7: 103,734,098 (GRCm39)	Y63C	probably benign	Het
Pcdha8	T	A	18: 37,126,787 (GRCm39)	V423E	probably damaging	Het
Pcdhb21	G	T	18: 37,648,772 (GRCm39)	V634L	probably benign	Het
Pde8a	T	C	7: 80,983,170 (GRCm39)	V791A	probably damaging	Het
Pds5a	A	G	5: 65,795,920 (GRCm39)	S657P	probably benign	Het
Pes1	CGGAGGAGGAGGAGGAGGAGGAGG	CGGAGGAGGAGGAGGAGGAGG	11: 3,927,719 (GRCm39)		probably benign	Het
Rad51d	A	G	11: 82,781,196 (GRCm39)	V17A	possibly damaging	Het
Sdc1	A	T	12: 8,841,743 (GRCm39)		probably null	Het
Sdcbp2	T	A	2: 151,429,057 (GRCm39)	I152N	probably damaging	Het
Slc4a4	G	T	5: 89,194,076 (GRCm39)	M141I	probably benign	Het
Sntb1	C	G	15: 55,506,191 (GRCm39)	G461R	probably damaging	Het
Spata6	T	C	4: 111,656,315 (GRCm39)	C320R	probably damaging	Het
Spata6l	T	C	19: 28,905,089 (GRCm39)	H325R	possibly damaging	Het
Ssu2	T	A	6: 112,357,957 (GRCm39)	T129S	probably damaging	Het
Stat5a	T	A	11: 100,771,409 (GRCm39)	W631R	probably damaging	Het
Sult1c2	T	A	17: 54,143,939 (GRCm39)	N122I	possibly damaging	Het
Synpo2	G	A	3: 122,911,331 (GRCm39)	Q105*	probably null	Het
Tert	G	A	13: 73,787,362 (GRCm39)	V783I	probably damaging	Het
Ticam1	G	T	17: 56,578,117 (GRCm39)	T326K	probably benign	Het
Tmem63b	T	C	17: 45,980,888 (GRCm39)	M269V	possibly damaging	Het
Tmem86a	T	A	7: 46,702,794 (GRCm39)	V73E	possibly damaging	Het
Trpv4	G	A	5: 114,761,675 (GRCm39)	R818C	possibly damaging	Het
Tstd2	A	G	4: 46,135,542 (GRCm39)	S4P	probably benign	Het
Ttn	A	T	2: 76,644,715 (GRCm39)	V4686E	probably damaging	Het
Ubash3b	A	G	9: 40,954,769 (GRCm39)		probably null	Het
Usp31	A	G	7: 121,267,005 (GRCm39)		probably null	Het
Usp33	A	G	3: 152,089,824 (GRCm39)	E780G	possibly damaging	Het
Vapb	T	A	2: 173,613,336 (GRCm39)	Y78*	probably null	Het
Vps13b	G	A	15: 35,887,094 (GRCm39)	R3227Q	probably damaging	Het
Vps33a	A	T	5: 123,696,693 (GRCm39)	I320N	probably damaging	Het
Wnt5a	T	C	14: 28,244,727 (GRCm39)	C305R	probably damaging	Het
Zbtb38	A	G	9: 96,569,696 (GRCm39)	C463R	probably damaging	Het
Zc3h12d	G	A	10: 7,742,090 (GRCm39)	C263Y	probably damaging	Het
Zfp971	G	A	2: 177,675,526 (GRCm39)	R375Q	probably damaging	Het
Znrf1	T	A	8: 112,345,826 (GRCm39)		probably null	Het

Other mutations in Kyat3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00162:Kyat3	APN	3	142,440,235 (GRCm39)	missense	probably benign	0.25
IGL00228:Kyat3	APN	3	142,432,018 (GRCm39)	missense	probably damaging	1.00
IGL02065:Kyat3	APN	3	142,426,136 (GRCm39)	missense	probably benign	0.07
IGL02529:Kyat3	APN	3	142,426,235 (GRCm39)	missense	probably benign
IGL02665:Kyat3	APN	3	142,440,227 (GRCm39)	splice site	probably null
IGL03399:Kyat3	APN	3	142,431,771 (GRCm39)	missense	probably damaging	0.99
R1013:Kyat3	UTSW	3	142,432,007 (GRCm39)	missense	probably damaging	0.97
R1180:Kyat3	UTSW	3	142,443,531 (GRCm39)	critical splice acceptor site	probably null
R1181:Kyat3	UTSW	3	142,443,531 (GRCm39)	critical splice acceptor site	probably null
R1236:Kyat3	UTSW	3	142,444,020 (GRCm39)	missense	probably benign
R1826:Kyat3	UTSW	3	142,428,940 (GRCm39)	missense	possibly damaging	0.86
R3792:Kyat3	UTSW	3	142,443,605 (GRCm39)	missense	probably null	0.29
R4165:Kyat3	UTSW	3	142,432,066 (GRCm39)	splice site	probably null
R4332:Kyat3	UTSW	3	142,431,187 (GRCm39)	missense	probably damaging	1.00
R4353:Kyat3	UTSW	3	142,437,054 (GRCm39)	critical splice donor site	probably null
R5257:Kyat3	UTSW	3	142,440,337 (GRCm39)	missense	probably benign	0.07
R5687:Kyat3	UTSW	3	142,440,343 (GRCm39)	missense	probably null	0.00
R5933:Kyat3	UTSW	3	142,429,021 (GRCm39)	missense	probably damaging	1.00
R6374:Kyat3	UTSW	3	142,443,998 (GRCm39)	missense	probably damaging	1.00
R6537:Kyat3	UTSW	3	142,435,573 (GRCm39)	missense	probably benign	0.12
R6938:Kyat3	UTSW	3	142,431,183 (GRCm39)	missense	probably damaging	1.00
R7092:Kyat3	UTSW	3	142,435,556 (GRCm39)	missense	probably damaging	1.00
R7176:Kyat3	UTSW	3	142,443,600 (GRCm39)	missense	possibly damaging	0.73
R7203:Kyat3	UTSW	3	142,426,162 (GRCm39)	missense	probably damaging	0.97
R7252:Kyat3	UTSW	3	142,426,219 (GRCm39)	missense	probably benign	0.05
R7487:Kyat3	UTSW	3	142,431,955 (GRCm39)	nonsense	probably null
R7522:Kyat3	UTSW	3	142,440,305 (GRCm39)	missense	probably damaging	1.00
R7729:Kyat3	UTSW	3	142,432,066 (GRCm39)	splice site	probably null
R8978:Kyat3	UTSW	3	142,443,596 (GRCm39)	missense	probably benign	0.11
R9773:Kyat3	UTSW	3	142,431,820 (GRCm39)	missense	probably damaging	0.99

Predicted Primers

PCR Primer
(F):5'- TGACCGAGTGACTTCTTGAC -3'
(R):5'- TGCTGGAGTTGTGAAAACACAC -3'

Sequencing Primer
(F):5'- CGAGTGACTTCTTGACACAAATC -3'
(R):5'- GGAGTTGTGAAAACACACTCTCTTC -3'

Posted On

2016-09-06