Incidental Mutation 'R5525:Or12d13'
| ID |
431828 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or12d13
|
| Ensembl Gene |
ENSMUSG00000049618 |
| Gene Name |
olfactory receptor family 12 subfamily D member 13 |
| Synonyms |
MOR250-3, Olfr103, MOR250-8_p, GA_x6K02T2PSCP-1798423-1797482 |
| MMRRC Submission |
043083-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.066)
|
| Stock # |
R5525 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
17 |
| Chromosomal Location |
37647180-37648121 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to T
at 37647517 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Glycine to Aspartic acid
at position 202
(G202D)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000134539
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000058826]
[ENSMUST00000173472]
|
| AlphaFold |
Q920Y8 |
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000058826
AA Change: G202D
PolyPhen 2
Score 0.987 (Sensitivity: 0.73; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000094934
Gene: ENSMUSG00000049618
AA Change: G202D
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
29 |
307 |
3.5e-52 |
PFAM |
|
Pfam:7tm_1
|
39 |
289 |
3.8e-21 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000173472
AA Change: G202D
PolyPhen 2
Score 0.987 (Sensitivity: 0.73; Specificity: 0.96)
|
| SMART Domains |
Protein: ENSMUSP00000134539
Gene: ENSMUSG00000049618
AA Change: G202D
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_1
|
39 |
289 |
2.8e-31 |
PFAM |
|
Pfam:7tm_4
|
137 |
282 |
1.1e-38 |
PFAM |
|
| Coding Region Coverage |
- 1x: 98.3%
- 3x: 97.3%
- 10x: 95.2%
- 20x: 90.9%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 33 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Acan |
A |
G |
7: 78,749,731 (GRCm39) |
T1501A |
probably benign |
Het |
| Acin1 |
G |
A |
14: 54,901,848 (GRCm39) |
A648V |
possibly damaging |
Het |
| Agap1 |
A |
G |
1: 89,671,495 (GRCm39) |
T401A |
possibly damaging |
Het |
| Anapc4 |
T |
G |
5: 53,014,151 (GRCm39) |
M440R |
probably damaging |
Het |
| Ankrd26 |
A |
G |
6: 118,504,692 (GRCm39) |
M739T |
probably benign |
Het |
| Brip1 |
T |
C |
11: 86,001,273 (GRCm39) |
E721G |
possibly damaging |
Het |
| Bzw1 |
A |
G |
1: 58,442,065 (GRCm39) |
E221G |
possibly damaging |
Het |
| Cenpm |
A |
C |
15: 82,123,492 (GRCm39) |
|
probably null |
Het |
| Exosc1 |
T |
A |
19: 41,912,457 (GRCm39) |
K143N |
probably damaging |
Het |
| Fgd5 |
T |
A |
6: 92,043,228 (GRCm39) |
L1236Q |
probably damaging |
Het |
| Gemin6 |
T |
G |
17: 80,535,178 (GRCm39) |
V46G |
probably damaging |
Het |
| Grm3 |
C |
T |
5: 9,554,872 (GRCm39) |
V807I |
probably damaging |
Het |
| Kndc1 |
A |
G |
7: 139,504,026 (GRCm39) |
N1110S |
probably benign |
Het |
| Magi1 |
A |
T |
6: 93,769,354 (GRCm39) |
V17D |
possibly damaging |
Het |
| Mdn1 |
T |
G |
4: 32,767,961 (GRCm39) |
M5298R |
possibly damaging |
Het |
| Nlrp9c |
T |
A |
7: 26,083,926 (GRCm39) |
E551V |
probably damaging |
Het |
| Oacyl |
A |
C |
18: 65,878,427 (GRCm39) |
I457L |
probably benign |
Het |
| Or5p69 |
A |
G |
7: 107,967,206 (GRCm39) |
I170V |
probably benign |
Het |
| Or5t17 |
A |
T |
2: 86,832,683 (GRCm39) |
E123D |
possibly damaging |
Het |
| Rab11fip3 |
T |
C |
17: 26,210,269 (GRCm39) |
E996G |
probably damaging |
Het |
| Rabep1 |
T |
A |
11: 70,813,972 (GRCm39) |
S554T |
probably damaging |
Het |
| Rln1 |
T |
C |
19: 29,311,920 (GRCm39) |
E26G |
probably benign |
Het |
| Rpf1 |
A |
G |
3: 146,223,559 (GRCm39) |
|
silent |
Het |
| Sdk1 |
T |
C |
5: 142,171,020 (GRCm39) |
V1961A |
possibly damaging |
Het |
| Serpinb8 |
A |
T |
1: 107,535,023 (GRCm39) |
I365F |
probably damaging |
Het |
| Shank2 |
A |
G |
7: 143,623,846 (GRCm39) |
D277G |
probably damaging |
Het |
| Snapc4 |
ACTGCTGCTGCTGCTGCTGC |
ACTGCTGCTGCTGCTGC |
2: 26,259,538 (GRCm39) |
|
probably benign |
Het |
| Thsd7a |
T |
C |
6: 12,332,006 (GRCm39) |
T1269A |
possibly damaging |
Het |
| Ttll3 |
A |
G |
6: 113,389,939 (GRCm39) |
N776D |
probably benign |
Het |
| Unc80 |
A |
G |
1: 66,645,773 (GRCm39) |
E1483G |
possibly damaging |
Het |
| Ush2a |
A |
G |
1: 188,485,803 (GRCm39) |
D2971G |
probably benign |
Het |
| Zfp322a |
A |
G |
13: 23,541,685 (GRCm39) |
V19A |
probably benign |
Het |
| Zfp462 |
C |
A |
4: 55,050,281 (GRCm39) |
P2164T |
possibly damaging |
Het |
|
| Other mutations in Or12d13 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00333:Or12d13
|
APN |
17 |
37,647,474 (GRCm39) |
nonsense |
probably null |
|
|
IGL01953:Or12d13
|
APN |
17 |
37,647,766 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02556:Or12d13
|
APN |
17 |
37,647,887 (GRCm39) |
missense |
probably benign |
0.00 |
|
IGL02574:Or12d13
|
APN |
17 |
37,647,415 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02737:Or12d13
|
APN |
17 |
37,647,664 (GRCm39) |
missense |
possibly damaging |
0.94 |
|
IGL02995:Or12d13
|
APN |
17 |
37,647,600 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1078:Or12d13
|
UTSW |
17 |
37,647,917 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1466:Or12d13
|
UTSW |
17 |
37,647,847 (GRCm39) |
missense |
probably benign |
0.43 |
|
R1466:Or12d13
|
UTSW |
17 |
37,647,847 (GRCm39) |
missense |
probably benign |
0.43 |
|
R3024:Or12d13
|
UTSW |
17 |
37,647,918 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R3858:Or12d13
|
UTSW |
17 |
37,648,117 (GRCm39) |
nonsense |
probably null |
|
|
R4979:Or12d13
|
UTSW |
17 |
37,647,759 (GRCm39) |
missense |
probably benign |
0.06 |
|
R5062:Or12d13
|
UTSW |
17 |
37,647,822 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5215:Or12d13
|
UTSW |
17 |
37,647,704 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5441:Or12d13
|
UTSW |
17 |
37,647,159 (GRCm39) |
splice site |
probably null |
|
|
R5453:Or12d13
|
UTSW |
17 |
37,647,953 (GRCm39) |
missense |
possibly damaging |
0.96 |
|
R5660:Or12d13
|
UTSW |
17 |
37,647,535 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5859:Or12d13
|
UTSW |
17 |
37,647,260 (GRCm39) |
missense |
possibly damaging |
0.61 |
|
R6211:Or12d13
|
UTSW |
17 |
37,647,599 (GRCm39) |
missense |
possibly damaging |
0.90 |
|
R6958:Or12d13
|
UTSW |
17 |
37,647,308 (GRCm39) |
missense |
probably benign |
|
|
R7060:Or12d13
|
UTSW |
17 |
37,647,352 (GRCm39) |
missense |
probably benign |
0.02 |
|
R7567:Or12d13
|
UTSW |
17 |
37,648,062 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7784:Or12d13
|
UTSW |
17 |
37,647,946 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R7784:Or12d13
|
UTSW |
17 |
37,647,469 (GRCm39) |
missense |
probably benign |
0.13 |
|
R7978:Or12d13
|
UTSW |
17 |
37,647,392 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8284:Or12d13
|
UTSW |
17 |
37,647,587 (GRCm39) |
missense |
probably benign |
0.01 |
|
R8419:Or12d13
|
UTSW |
17 |
37,647,466 (GRCm39) |
missense |
possibly damaging |
0.75 |
|
R8957:Or12d13
|
UTSW |
17 |
37,647,382 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9761:Or12d13
|
UTSW |
17 |
37,648,057 (GRCm39) |
missense |
possibly damaging |
0.81 |
|
Z1088:Or12d13
|
UTSW |
17 |
37,647,596 (GRCm39) |
missense |
probably damaging |
0.99 |
|
| Predicted Primers |
PCR Primer
(F):5'- ATGGCAATGATTCTGTCCTGG -3'
(R):5'- ATGGCTGTGACCATCTGGAC -3'
Sequencing Primer
(F):5'- CTGGTCTAAAGAGCTGCCTGAG -3'
(R):5'- GCTGTGACCATCTGGACCATTG -3'
|
| Posted On |
2016-10-05 |
Incidental Mutation