Incidental Mutation 'R5527:Supv3l1'
ID 431933
Institutional Source Beutler Lab
Gene Symbol Supv3l1
Ensembl Gene ENSMUSG00000020079
Gene Name suppressor of var1, 3-like 1 (S. cerevisiae)
Synonyms 6330443E10Rik
MMRRC Submission 043085-MU
Accession Numbers
Essential gene? Essential (E-score: 1.000) question?
Stock # R5527 (G1)
Quality Score 225
Status Not validated
Chromosome 10
Chromosomal Location 62264988-62285517 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) C to T at 62265608 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Glutamine at position 644 (R644Q)
Ref Sequence ENSEMBL: ENSMUSP00000020273 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000020273]
AlphaFold Q80YD1
Predicted Effect probably damaging
Transcript: ENSMUST00000020273
AA Change: R644Q

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000020273
Gene: ENSMUSG00000020079
AA Change: R644Q

DomainStartEndE-ValueType
low complexity region 8 25 N/A INTRINSIC
low complexity region 47 56 N/A INTRINSIC
HELICc 379 475 1.44e-18 SMART
Pfam:SUV3_C 625 672 4e-19 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000159042
Predicted Effect noncoding transcript
Transcript: ENSMUST00000161830
Predicted Effect noncoding transcript
Transcript: ENSMUST00000161941
Predicted Effect probably benign
Transcript: ENSMUST00000162023
Coding Region Coverage
  • 1x: 98.2%
  • 3x: 97.2%
  • 10x: 94.9%
  • 20x: 89.7%
Validation Efficiency
MGI Phenotype PHENOTYPE: Mice homozygous for a hypomorphic allele exhibit embryonic lethality between E9.5 and E12.5. Mice homozygous for a knock-out allele exhibit embryonic lethality between E8.5 and 9.5. Mice heterozygous for this allele produce offspring with mitochondrial defects regardless of offspring genotype. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 64 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcc1 T A 16: 14,278,842 (GRCm39) Y1051N probably benign Het
Bach1 T C 16: 87,516,433 (GRCm39) S325P probably benign Het
Baz2a T C 10: 127,960,786 (GRCm39) S1529P probably damaging Het
Bicd1 T C 6: 149,396,134 (GRCm39) L168P probably damaging Het
Cat A G 2: 103,303,318 (GRCm39) F153S probably damaging Het
Ccnt2 T C 1: 127,730,401 (GRCm39) M426T probably benign Het
Cdk7 C T 13: 100,866,980 (GRCm39) V38I probably damaging Het
Cenpj T C 14: 56,764,440 (GRCm39) Y1324C probably damaging Het
Cplane2 C A 4: 140,947,303 (GRCm39) A228D probably damaging Het
Ddx47 C A 6: 134,988,657 (GRCm39) A18E probably benign Het
Dnah2 G A 11: 69,328,014 (GRCm39) Q3370* probably null Het
Dnah6 C T 6: 73,136,212 (GRCm39) V976I probably benign Het
Dock7 C T 4: 98,842,105 (GRCm39) probably benign Het
Dpy19l3 A T 7: 35,413,555 (GRCm39) I362N possibly damaging Het
Fam118a A T 15: 84,942,999 (GRCm39) T343S probably benign Het
Fcgbp T A 7: 27,793,060 (GRCm39) D1021E probably benign Het
Fkbp1b T C 12: 4,883,746 (GRCm39) Y83C probably damaging Het
Flt4 T C 11: 49,525,581 (GRCm39) I709T probably damaging Het
Gga3 G T 11: 115,478,262 (GRCm39) A510D probably damaging Het
Heatr1 T C 13: 12,417,641 (GRCm39) I264T probably damaging Het
Heatr1 T C 13: 12,419,829 (GRCm39) I384T probably benign Het
Hes2 T C 4: 152,244,849 (GRCm39) V106A probably benign Het
Igf1r T A 7: 67,857,569 (GRCm39) M1083K probably damaging Het
Il7r A T 15: 9,513,010 (GRCm39) D166E probably benign Het
Ipo4 G A 14: 55,869,507 (GRCm39) probably null Het
Klk1b26 T C 7: 43,662,187 (GRCm39) I15T probably benign Het
Krt42 T C 11: 100,154,121 (GRCm39) probably benign Het
Lag3 T C 6: 124,885,592 (GRCm39) T263A probably damaging Het
Lilra6 T A 7: 3,917,586 (GRCm39) probably benign Het
Lrrc31 T A 3: 30,745,377 (GRCm39) H90L probably damaging Het
Lvrn G A 18: 47,006,870 (GRCm39) D331N probably damaging Het
Me2 A T 18: 73,924,187 (GRCm39) W342R probably damaging Het
Mob2 A G 7: 141,563,147 (GRCm39) F220S probably damaging Het
Mroh4 A G 15: 74,486,865 (GRCm39) I342T probably damaging Het
Naa15 T C 3: 51,349,368 (GRCm39) Y46H probably damaging Het
Neb A G 2: 52,224,465 (GRCm39) V10A unknown Het
Nlrc5 A G 8: 95,217,044 (GRCm39) H1011R probably damaging Het
Nr1i3 A G 1: 171,041,921 (GRCm39) T2A possibly damaging Het
Nrros T C 16: 31,963,288 (GRCm39) N207S probably damaging Het
Or52m2 A T 7: 102,263,768 (GRCm39) S143T probably benign Het
Or7c70 C T 10: 78,683,609 (GRCm39) V47M probably benign Het
Pcare A T 17: 72,059,635 (GRCm39) V14D probably damaging Het
Ptprz1 C T 6: 23,000,052 (GRCm39) T714I possibly damaging Het
Rp1 T C 1: 4,416,616 (GRCm39) T1499A possibly damaging Het
Rubcn T C 16: 32,647,081 (GRCm39) K771E probably damaging Het
Sbds T C 5: 130,275,247 (GRCm39) E227G possibly damaging Het
Setd1a C T 7: 127,384,801 (GRCm39) P8S probably damaging Het
Sh3tc2 A G 18: 62,144,932 (GRCm39) I1129V probably benign Het
Spef1 T A 2: 131,014,661 (GRCm39) D87V probably damaging Het
Thoc6 A G 17: 23,889,769 (GRCm39) F51S probably damaging Het
Tm4sf19 T C 16: 32,226,739 (GRCm39) L176P probably damaging Het
Tma16 A G 8: 66,936,776 (GRCm39) I17T possibly damaging Het
Tpd52l2 G A 2: 181,143,847 (GRCm39) probably null Het
Ube2j1 C T 4: 33,045,164 (GRCm39) P146S probably benign Het
Ubr4 T A 4: 139,208,099 (GRCm39) I4960N possibly damaging Het
Usp13 A G 3: 32,919,987 (GRCm39) D224G probably damaging Het
Uxs1 T C 1: 43,819,240 (GRCm39) T188A probably damaging Het
Vmn2r12 A T 5: 109,234,483 (GRCm39) Y576* probably null Het
Vmn2r73 T C 7: 85,507,575 (GRCm39) D579G possibly damaging Het
Xpr1 T C 1: 155,165,981 (GRCm39) N524D probably benign Het
Xrn2 A T 2: 146,871,675 (GRCm39) I366L probably benign Het
Zfp236 A T 18: 82,676,159 (GRCm39) V386E possibly damaging Het
Zfp292 A T 4: 34,806,261 (GRCm39) L2261Q probably damaging Het
Zpld1 C G 16: 55,046,725 (GRCm39) E415Q probably benign Het
Other mutations in Supv3l1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL03067:Supv3l1 APN 10 62,265,600 (GRCm39) missense probably damaging 1.00
R0090:Supv3l1 UTSW 10 62,265,485 (GRCm39) missense probably benign 0.00
R0477:Supv3l1 UTSW 10 62,266,364 (GRCm39) missense probably damaging 0.98
R0946:Supv3l1 UTSW 10 62,265,599 (GRCm39) missense probably damaging 1.00
R1460:Supv3l1 UTSW 10 62,279,162 (GRCm39) splice site probably benign
R1546:Supv3l1 UTSW 10 62,268,225 (GRCm39) missense probably benign 0.08
R1941:Supv3l1 UTSW 10 62,285,391 (GRCm39) missense probably benign
R3916:Supv3l1 UTSW 10 62,285,199 (GRCm39) missense possibly damaging 0.67
R5030:Supv3l1 UTSW 10 62,266,394 (GRCm39) missense probably damaging 1.00
R5040:Supv3l1 UTSW 10 62,282,844 (GRCm39) missense possibly damaging 0.93
R5051:Supv3l1 UTSW 10 62,279,196 (GRCm39) missense probably damaging 0.99
R5085:Supv3l1 UTSW 10 62,271,291 (GRCm39) missense probably benign 0.00
R5288:Supv3l1 UTSW 10 62,266,375 (GRCm39) missense possibly damaging 0.90
R5359:Supv3l1 UTSW 10 62,268,178 (GRCm39) missense probably damaging 0.96
R5372:Supv3l1 UTSW 10 62,268,136 (GRCm39) missense probably damaging 0.99
R5384:Supv3l1 UTSW 10 62,266,375 (GRCm39) missense possibly damaging 0.90
R5385:Supv3l1 UTSW 10 62,266,375 (GRCm39) missense possibly damaging 0.90
R5602:Supv3l1 UTSW 10 62,266,371 (GRCm39) missense possibly damaging 0.81
R5713:Supv3l1 UTSW 10 62,266,283 (GRCm39) missense possibly damaging 0.91
R6150:Supv3l1 UTSW 10 62,271,501 (GRCm39) missense possibly damaging 0.90
R6220:Supv3l1 UTSW 10 62,274,800 (GRCm39) missense possibly damaging 0.82
R6903:Supv3l1 UTSW 10 62,277,016 (GRCm39) missense probably damaging 1.00
R6941:Supv3l1 UTSW 10 62,266,365 (GRCm39) missense possibly damaging 0.86
R7187:Supv3l1 UTSW 10 62,271,328 (GRCm39) missense probably damaging 1.00
R7250:Supv3l1 UTSW 10 62,280,846 (GRCm39) missense probably damaging 1.00
R7438:Supv3l1 UTSW 10 62,266,249 (GRCm39) critical splice donor site probably null
R7439:Supv3l1 UTSW 10 62,266,394 (GRCm39) missense probably damaging 0.99
R7515:Supv3l1 UTSW 10 62,268,090 (GRCm39) missense probably damaging 1.00
R7579:Supv3l1 UTSW 10 62,271,488 (GRCm39) missense possibly damaging 0.61
R7579:Supv3l1 UTSW 10 62,271,487 (GRCm39) missense probably damaging 1.00
R7923:Supv3l1 UTSW 10 62,280,860 (GRCm39) missense probably damaging 0.98
R7973:Supv3l1 UTSW 10 62,285,202 (GRCm39) missense probably damaging 1.00
R8098:Supv3l1 UTSW 10 62,265,282 (GRCm39) missense probably benign 0.01
R8327:Supv3l1 UTSW 10 62,277,004 (GRCm39) missense probably damaging 1.00
R8699:Supv3l1 UTSW 10 62,268,234 (GRCm39) missense possibly damaging 0.95
R8947:Supv3l1 UTSW 10 62,268,118 (GRCm39) missense probably benign 0.28
R9169:Supv3l1 UTSW 10 62,268,238 (GRCm39) missense probably damaging 1.00
R9509:Supv3l1 UTSW 10 62,265,411 (GRCm39) missense probably benign
R9520:Supv3l1 UTSW 10 62,268,181 (GRCm39) missense probably damaging 1.00
RF016:Supv3l1 UTSW 10 62,273,287 (GRCm39) missense possibly damaging 0.78
Predicted Primers PCR Primer
(F):5'- TCTTGGAGGCTCCTGACAAC -3'
(R):5'- GTTTTCACAGGGTTTCCAGCC -3'

Sequencing Primer
(F):5'- TCCTGACAACCGTGACTGGTC -3'
(R):5'- CTGCAGTGGAGTATATTAGAATCCCG -3'
Posted On 2016-10-05