Incidental Mutation 'R5459:Vmn1r19'
ID |
432925 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Vmn1r19
|
Ensembl Gene |
ENSMUSG00000115799 |
Gene Name |
vomeronasal 1 receptor 19 |
Synonyms |
V1rc27 |
MMRRC Submission |
043022-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.094)
|
Stock # |
R5459 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
6 |
Chromosomal Location |
57381449-57382375 bp(+) (GRCm39) |
Type of Mutation |
nonsense |
DNA Base Change (assembly) |
T to A
at 57381475 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Tyrosine to Stop codon
at position 9
(Y9*)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000087264
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000089830]
|
AlphaFold |
Q8R2C7 |
Predicted Effect |
probably null
Transcript: ENSMUST00000089830
AA Change: Y9*
|
SMART Domains |
Protein: ENSMUSP00000087264 Gene: ENSMUSG00000115799 AA Change: Y9*
Domain | Start | End | E-Value | Type |
Pfam:V1R
|
28 |
293 |
6.6e-58 |
PFAM |
|
Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.7%
- 10x: 97.5%
- 20x: 95.8%
|
Validation Efficiency |
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 40 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
2300002M23Rik |
A |
G |
17: 35,879,079 (GRCm39) |
E139G |
possibly damaging |
Het |
Abcc6 |
T |
C |
7: 45,631,607 (GRCm39) |
N1223S |
probably benign |
Het |
Adamts3 |
A |
T |
5: 89,839,332 (GRCm39) |
|
probably null |
Het |
Aloxe3 |
T |
A |
11: 69,023,654 (GRCm39) |
F259Y |
possibly damaging |
Het |
Armc9 |
G |
A |
1: 86,135,694 (GRCm39) |
R550Q |
probably damaging |
Het |
Ctnnd2 |
A |
G |
15: 30,887,334 (GRCm39) |
D787G |
probably damaging |
Het |
Dnah7b |
A |
G |
1: 46,148,472 (GRCm39) |
I283V |
probably null |
Het |
Ebf2 |
A |
G |
14: 67,472,650 (GRCm39) |
M23V |
probably benign |
Het |
Fbxw11 |
T |
C |
11: 32,689,191 (GRCm39) |
V438A |
possibly damaging |
Het |
Fcrla |
G |
A |
1: 170,745,738 (GRCm39) |
T348M |
possibly damaging |
Het |
Gpr179 |
A |
T |
11: 97,227,483 (GRCm39) |
H1557Q |
probably benign |
Het |
Gpr87 |
A |
G |
3: 59,087,148 (GRCm39) |
V119A |
possibly damaging |
Het |
Grep1 |
C |
T |
17: 23,930,817 (GRCm39) |
|
probably benign |
Het |
Hfm1 |
A |
G |
5: 107,052,629 (GRCm39) |
S285P |
probably damaging |
Het |
Hs3st5 |
T |
C |
10: 36,704,742 (GRCm39) |
V15A |
possibly damaging |
Het |
Hyal5 |
C |
T |
6: 24,891,250 (GRCm39) |
H355Y |
probably damaging |
Het |
Klk14 |
G |
A |
7: 43,341,501 (GRCm39) |
C51Y |
probably damaging |
Het |
Map4k3 |
T |
A |
17: 80,917,216 (GRCm39) |
N587Y |
probably damaging |
Het |
Mcm3ap |
T |
A |
10: 76,332,316 (GRCm39) |
L1211* |
probably null |
Het |
Mcmdc2 |
A |
G |
1: 10,007,309 (GRCm39) |
I620V |
probably benign |
Het |
Mical2 |
C |
T |
7: 111,981,444 (GRCm39) |
H539Y |
probably benign |
Het |
Myo9a |
T |
C |
9: 59,791,803 (GRCm39) |
L1802P |
probably damaging |
Het |
Neto2 |
T |
A |
8: 86,397,112 (GRCm39) |
I47F |
probably benign |
Het |
Oog3 |
G |
A |
4: 143,885,815 (GRCm39) |
T261I |
probably benign |
Het |
Or5b95 |
A |
G |
19: 12,657,799 (GRCm39) |
E109G |
probably damaging |
Het |
Pdilt |
A |
G |
7: 119,086,158 (GRCm39) |
L519P |
probably benign |
Het |
Pnpla6 |
A |
T |
8: 3,585,829 (GRCm39) |
M844L |
probably benign |
Het |
Polk |
C |
T |
13: 96,631,984 (GRCm39) |
G250R |
probably damaging |
Het |
Rasal2 |
A |
G |
1: 156,985,231 (GRCm39) |
S839P |
probably damaging |
Het |
Siae |
T |
C |
9: 37,528,119 (GRCm39) |
Y31H |
probably damaging |
Het |
Slc27a2 |
T |
C |
2: 126,422,912 (GRCm39) |
V379A |
probably damaging |
Het |
Snx9 |
C |
T |
17: 5,970,913 (GRCm39) |
T418M |
probably damaging |
Het |
Spata31e2 |
A |
C |
1: 26,724,272 (GRCm39) |
S303A |
probably damaging |
Het |
Srp72 |
A |
G |
5: 77,132,185 (GRCm39) |
T258A |
probably benign |
Het |
Tango6 |
T |
A |
8: 107,576,921 (GRCm39) |
D1058E |
probably damaging |
Het |
Tecpr1 |
T |
A |
5: 144,144,234 (GRCm39) |
Y656F |
probably damaging |
Het |
Tnik |
T |
A |
3: 28,715,890 (GRCm39) |
I1168K |
probably damaging |
Het |
Togaram1 |
A |
G |
12: 65,014,510 (GRCm39) |
E587G |
probably damaging |
Het |
Tyw1 |
A |
C |
5: 130,303,547 (GRCm39) |
D305A |
probably damaging |
Het |
Zkscan3 |
A |
T |
13: 21,578,982 (GRCm39) |
V142E |
probably damaging |
Het |
|
Other mutations in Vmn1r19 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00948:Vmn1r19
|
APN |
6 |
57,382,247 (GRCm39) |
missense |
probably benign |
0.03 |
IGL01287:Vmn1r19
|
APN |
6 |
57,382,179 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01516:Vmn1r19
|
APN |
6 |
57,381,857 (GRCm39) |
missense |
probably benign |
0.03 |
IGL01895:Vmn1r19
|
APN |
6 |
57,382,245 (GRCm39) |
missense |
probably benign |
0.02 |
IGL02676:Vmn1r19
|
APN |
6 |
57,382,025 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL03040:Vmn1r19
|
APN |
6 |
57,382,347 (GRCm39) |
missense |
unknown |
|
IGL03087:Vmn1r19
|
APN |
6 |
57,381,476 (GRCm39) |
missense |
probably benign |
0.01 |
PIT4802001:Vmn1r19
|
UTSW |
6 |
57,382,037 (GRCm39) |
missense |
probably damaging |
1.00 |
R0319:Vmn1r19
|
UTSW |
6 |
57,381,600 (GRCm39) |
missense |
possibly damaging |
0.93 |
R1368:Vmn1r19
|
UTSW |
6 |
57,381,656 (GRCm39) |
missense |
probably benign |
0.01 |
R1997:Vmn1r19
|
UTSW |
6 |
57,382,033 (GRCm39) |
missense |
probably damaging |
1.00 |
R2920:Vmn1r19
|
UTSW |
6 |
57,381,909 (GRCm39) |
missense |
probably benign |
0.03 |
R3857:Vmn1r19
|
UTSW |
6 |
57,382,098 (GRCm39) |
missense |
possibly damaging |
0.68 |
R4090:Vmn1r19
|
UTSW |
6 |
57,381,720 (GRCm39) |
missense |
probably damaging |
1.00 |
R4547:Vmn1r19
|
UTSW |
6 |
57,381,774 (GRCm39) |
missense |
possibly damaging |
0.56 |
R4823:Vmn1r19
|
UTSW |
6 |
57,382,219 (GRCm39) |
nonsense |
probably null |
|
R4951:Vmn1r19
|
UTSW |
6 |
57,381,927 (GRCm39) |
missense |
probably benign |
0.36 |
R5077:Vmn1r19
|
UTSW |
6 |
57,382,026 (GRCm39) |
missense |
probably benign |
0.00 |
R5625:Vmn1r19
|
UTSW |
6 |
57,382,281 (GRCm39) |
missense |
probably damaging |
1.00 |
R5690:Vmn1r19
|
UTSW |
6 |
57,381,780 (GRCm39) |
missense |
probably benign |
0.10 |
R5761:Vmn1r19
|
UTSW |
6 |
57,382,338 (GRCm39) |
missense |
unknown |
|
R6124:Vmn1r19
|
UTSW |
6 |
57,381,602 (GRCm39) |
missense |
probably benign |
0.02 |
R6373:Vmn1r19
|
UTSW |
6 |
57,382,317 (GRCm39) |
missense |
unknown |
|
R6476:Vmn1r19
|
UTSW |
6 |
57,381,578 (GRCm39) |
missense |
probably damaging |
0.99 |
R6938:Vmn1r19
|
UTSW |
6 |
57,381,992 (GRCm39) |
missense |
possibly damaging |
0.94 |
R7027:Vmn1r19
|
UTSW |
6 |
57,381,475 (GRCm39) |
nonsense |
probably null |
|
R7359:Vmn1r19
|
UTSW |
6 |
57,382,080 (GRCm39) |
missense |
probably damaging |
0.99 |
R7568:Vmn1r19
|
UTSW |
6 |
57,381,813 (GRCm39) |
missense |
possibly damaging |
0.69 |
R7893:Vmn1r19
|
UTSW |
6 |
57,381,664 (GRCm39) |
missense |
probably damaging |
1.00 |
R8481:Vmn1r19
|
UTSW |
6 |
57,381,932 (GRCm39) |
missense |
probably damaging |
0.99 |
R8487:Vmn1r19
|
UTSW |
6 |
57,382,166 (GRCm39) |
missense |
probably benign |
0.03 |
R8812:Vmn1r19
|
UTSW |
6 |
57,381,436 (GRCm39) |
start gained |
probably benign |
|
R8907:Vmn1r19
|
UTSW |
6 |
57,381,991 (GRCm39) |
missense |
probably benign |
|
R8976:Vmn1r19
|
UTSW |
6 |
57,381,719 (GRCm39) |
missense |
probably benign |
0.01 |
R9277:Vmn1r19
|
UTSW |
6 |
57,382,322 (GRCm39) |
missense |
unknown |
|
|
Predicted Primers |
PCR Primer
(F):5'- GGCTCTGGAAATTGAGATGAATC -3'
(R):5'- GCCATTCCCAAATTTTAGTGACTC -3'
Sequencing Primer
(F):5'- CTGGAAATTGAGATGAATCCATTCC -3'
(R):5'- GTGACTCTAATATGTTTGCAAGCAAG -3'
|
Posted On |
2016-10-06 |