Mutagenetix > Incidental Mutations

Incidental Mutation 'R5528:4930519G04Rik'

433524

Institutional Source

Beutler Lab

Gene Symbol

4930519G04Rik

Ensembl Gene

ENSMUSG00000029564

Gene Name

RIKEN cDNA 4930519G04 gene

Synonyms

MMRRC Submission

043086-MU

Accession Numbers

Is this an essential gene?

Probably non essential (E-score: 0.055) question?

Stock #

R5528 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

114853664-114883880 bp(+) (GRCm38)

Type of Mutation

splice site (6 bp from exon)

DNA Base Change (assembly)

T to G at 114874354 bp

Zygosity

Heterozygous

Amino Acid Change

Gene Model

predicted gene model for transcript(s): [ENSMUST00000031547] [ENSMUST00000134389] [ENSMUST00000134389]

Predicted Effect

probably null
Transcript: ENSMUST00000031547

SMART Domains

Protein: ENSMUSP00000031547
Gene: ENSMUSG00000029564

Domain	Start	End	E-Value	Type
coiled coil region	88	111	N/A	INTRINSIC
low complexity region	173	181	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000112153

SMART Domains

Protein: ENSMUSP00000107780
Gene: ENSMUSG00000029564

Domain	Start	End	E-Value	Type
coiled coil region	88	111	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000134389

SMART Domains

Protein: ENSMUSP00000144618
Gene: ENSMUSG00000029564

Domain	Start	End	E-Value	Type
coiled coil region	62	85	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000134389

SMART Domains

Protein: ENSMUSP00000144618
Gene: ENSMUSG00000029564

Domain	Start	End	E-Value	Type
coiled coil region	62	85	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000142582

SMART Domains

Protein: ENSMUSP00000116852
Gene: ENSMUSG00000029564

Domain	Start	End	E-Value	Type
coiled coil region	69	92	N/A	INTRINSIC

Predicted Effect

probably null
Transcript: ENSMUST00000142582

SMART Domains

Protein: ENSMUSP00000116852
Gene: ENSMUSG00000029564

Domain	Start	End	E-Value	Type
coiled coil region	69	92	N/A	INTRINSIC

Coding Region Coverage

1x: 98.6%
3x: 97.4%
10x: 95.4%
20x: 91.4%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 40 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1110002E22Rik	T	C	3: 138,066,499	L483P	probably benign	Het
1700025F22Rik	T	C	19: 11,141,635	S37G	possibly damaging	Het
3110043O21Rik	T	C	4: 35,213,556	D198G	probably benign	Het
Ablim2	C	T	5: 35,856,166	Q148*	probably null	Het
Ap3s2	A	T	7: 79,880,486	*194R	probably null	Het
Arpp21	C	T	9: 112,149,353	A235T	probably benign	Het
Ccdc33	T	C	9: 58,028,795	D939G	probably benign	Het
Celsr2	A	T	3: 108,413,294	I734N	probably damaging	Het
Clcn1	C	A	6: 42,300,341	N455K	probably benign	Het
Cpne8	C	T	15: 90,619,690	V91I	possibly damaging	Het
Ddx1	A	G	12: 13,229,294	V448A	probably damaging	Het
Dnhd1	G	A	7: 105,703,209	R2523Q	probably damaging	Het
Eif2a	G	T	3: 58,548,512	D311Y	probably damaging	Het
Eif2ak4	G	A	2: 118,427,938	E512K	probably damaging	Het
Esp15	A	T	17: 39,644,749	Y69F	probably benign	Het
Fam102a	G	A	2: 32,566,327	A334T	probably damaging	Het
Gm5689	A	G	18: 42,173,662		probably null	Het
Gucy1a1	A	T	3: 82,109,073	Y203N	probably damaging	Het
Hook3	T	C	8: 26,072,293	Q248R	probably damaging	Het
Ifit2	T	A	19: 34,573,537	V159E	possibly damaging	Het
Il17rd	T	C	14: 27,088,067	V20A	possibly damaging	Het
Kcnq3	T	A	15: 66,025,178	D291V	probably damaging	Het
Klf11	A	T	12: 24,654,930	M111L	probably benign	Het
Lama5	T	A	2: 180,194,563	H1165L	probably benign	Het
Lmo7	A	G	14: 101,902,086	N702S	probably damaging	Het
Lta4h	T	C	10: 93,471,874	V323A	probably damaging	Het
Mkrn3	T	C	7: 62,418,987	E352G	possibly damaging	Het
Mtf2	T	A	5: 108,094,157	L277Q	probably damaging	Het
Myo9b	A	G	8: 71,323,274	N370D	probably benign	Het
Nlrp4e	A	C	7: 23,336,891	K723T	probably benign	Het
Nsun3	A	G	16: 62,735,326	V279A	possibly damaging	Het
Pde6b	A	G	5: 108,423,558	D459G	probably benign	Het
Phgdh	T	C	3: 98,328,339	I121V	probably benign	Het
Pik3r5	T	C	11: 68,495,977	C811R	probably damaging	Het
Spaca6	A	C	17: 17,831,082	I27L	probably benign	Het
Trmt1l	G	A	1: 151,454,995	V588I	probably benign	Het
Tshr	A	G	12: 91,537,193	N302D	probably damaging	Het
Vmn2r23	A	G	6: 123,713,002	D279G	probably damaging	Het
Wnt3a	T	C	11: 59,275,280	N58S	probably damaging	Het
Zkscan8	A	G	13: 21,520,725	V276A	probably damaging	Het

Other mutations in 4930519G04Rik

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02019:4930519G04Rik	APN	5	114879584	missense	possibly damaging	0.90
IGL03287:4930519G04Rik	APN	5	114870176	missense	probably damaging	0.99
R0512:4930519G04Rik	UTSW	5	114863508	missense	probably benign	0.00
R1537:4930519G04Rik	UTSW	5	114870217	missense	probably benign	0.00
R1563:4930519G04Rik	UTSW	5	114863508	missense	probably benign	0.00
R2069:4930519G04Rik	UTSW	5	114874280	missense	probably benign	0.05
R4718:4930519G04Rik	UTSW	5	114863554	splice site	probably null
R4744:4930519G04Rik	UTSW	5	114879556	missense	possibly damaging	0.83
R5684:4930519G04Rik	UTSW	5	114879560	missense	possibly damaging	0.90
R7489:4930519G04Rik	UTSW	5	114879625	missense	unknown
R7548:4930519G04Rik	UTSW	5	114877998	missense	possibly damaging	0.46
R7665:4930519G04Rik	UTSW	5	114874323	splice site	probably null

Predicted Primers

PCR Primer
(F):5'- AGACAGTTTTACACGTGGGG -3'
(R):5'- TCTATTGAGGGAAGAAGTTGCTTAG -3'

Sequencing Primer
(F):5'- ACGTGGGGTGCCCTCAG -3'
(R):5'- TTAGGACTAAGCCGCTCCG -3'

Posted On

2016-10-06