Incidental Mutation 'R5529:Fgf14'
ID |
433598 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Fgf14
|
Ensembl Gene |
ENSMUSG00000025551 |
Gene Name |
fibroblast growth factor 14 |
Synonyms |
Fhf4 |
MMRRC Submission |
043087-MU
|
Accession Numbers |
|
Essential gene? |
Probably non essential
(E-score: 0.158)
|
Stock # |
R5529 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
14 |
Chromosomal Location |
124215319-124914539 bp(-) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
T to A
at 124217867 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Histidine to Leucine
at position 212
(H212L)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000026631
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000026631]
[ENSMUST00000049681]
[ENSMUST00000095529]
[ENSMUST00000132026]
|
AlphaFold |
no structure available at present |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000026631
AA Change: H212L
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
SMART Domains |
Protein: ENSMUSP00000026631 Gene: ENSMUSG00000025551 AA Change: H212L
Domain | Start | End | E-Value | Type |
low complexity region
|
23 |
34 |
N/A |
INTRINSIC |
FGF
|
69 |
200 |
1.75e-63 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000049681
|
SMART Domains |
Protein: ENSMUSP00000059019 Gene: ENSMUSG00000032925
Domain | Start | End | E-Value | Type |
signal peptide
|
1 |
24 |
N/A |
INTRINSIC |
internal_repeat_1
|
62 |
164 |
7.9e-12 |
PROSPERO |
EGF_like
|
184 |
217 |
6.95e1 |
SMART |
EGF
|
275 |
311 |
2.25e1 |
SMART |
low complexity region
|
335 |
348 |
N/A |
INTRINSIC |
Pfam:EGF_2
|
368 |
398 |
3.6e-8 |
PFAM |
low complexity region
|
423 |
438 |
N/A |
INTRINSIC |
low complexity region
|
448 |
456 |
N/A |
INTRINSIC |
Blast:EGF_like
|
457 |
486 |
4e-9 |
BLAST |
|
Predicted Effect |
possibly damaging
Transcript: ENSMUST00000095529
AA Change: H217L
PolyPhen 2
Score 0.795 (Sensitivity: 0.85; Specificity: 0.93)
|
SMART Domains |
Protein: ENSMUSP00000093185 Gene: ENSMUSG00000025551 AA Change: H217L
Domain | Start | End | E-Value | Type |
FGF
|
74 |
205 |
1.75e-63 |
SMART |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000117453
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000132026
|
SMART Domains |
Protein: ENSMUSP00000115455 Gene: ENSMUSG00000032925
Domain | Start | End | E-Value | Type |
internal_repeat_2
|
22 |
50 |
3.54e-8 |
PROSPERO |
internal_repeat_1
|
23 |
87 |
7.45e-14 |
PROSPERO |
low complexity region
|
101 |
126 |
N/A |
INTRINSIC |
EGF
|
151 |
187 |
2.25e1 |
SMART |
low complexity region
|
211 |
224 |
N/A |
INTRINSIC |
Pfam:EGF_2
|
239 |
274 |
1.5e-7 |
PFAM |
low complexity region
|
299 |
314 |
N/A |
INTRINSIC |
low complexity region
|
324 |
332 |
N/A |
INTRINSIC |
internal_repeat_2
|
334 |
362 |
3.54e-8 |
PROSPERO |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000186300
|
Coding Region Coverage |
- 1x: 98.7%
- 3x: 97.5%
- 10x: 95.7%
- 20x: 92.5%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a member of the fibroblast growth factor (FGF) family. FGF family members possess broad mitogenic and cell survival activities, and are involved in a variety of biological processes, including embryonic development, cell growth, morphogenesis, tissue repair, tumor growth and invasion. A mutation in this gene is associated with autosomal dominant cerebral ataxia. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jul 2008] PHENOTYPE: Mice homozygous for disruptions in this gene display impaired balance and grip strength. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 48 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
Abca12 |
T |
C |
1: 71,304,040 (GRCm39) |
Y2079C |
probably damaging |
Het |
Alg2 |
T |
C |
4: 47,472,101 (GRCm39) |
R236G |
probably damaging |
Het |
Alpl |
T |
A |
4: 137,473,733 (GRCm39) |
N323I |
probably damaging |
Het |
Anxa3 |
A |
G |
5: 96,976,238 (GRCm39) |
E172G |
probably benign |
Het |
Atp8a2 |
A |
G |
14: 60,031,314 (GRCm39) |
|
probably null |
Het |
Cadps |
T |
C |
14: 12,454,285 (GRCm38) |
K1078E |
probably damaging |
Het |
Ccn5 |
T |
C |
2: 163,667,279 (GRCm39) |
|
probably null |
Het |
Ces2e |
G |
T |
8: 105,656,543 (GRCm39) |
V258L |
probably benign |
Het |
Daam2 |
A |
G |
17: 49,766,085 (GRCm39) |
F1041S |
probably benign |
Het |
Dcstamp |
A |
G |
15: 39,617,932 (GRCm39) |
I114V |
probably benign |
Het |
Ddhd2 |
C |
T |
8: 26,229,587 (GRCm39) |
R496Q |
probably benign |
Het |
Dnhd1 |
G |
A |
7: 105,352,416 (GRCm39) |
R2523Q |
probably damaging |
Het |
Eml6 |
T |
A |
11: 29,714,126 (GRCm39) |
R1335S |
probably benign |
Het |
F12 |
T |
C |
13: 55,569,872 (GRCm39) |
N102S |
probably benign |
Het |
Fbn1 |
G |
A |
2: 125,215,870 (GRCm39) |
L712F |
probably benign |
Het |
Fgf1 |
G |
T |
18: 38,991,657 (GRCm39) |
F37L |
probably damaging |
Het |
Gm10036 |
A |
T |
18: 15,965,858 (GRCm39) |
Q3L |
probably benign |
Het |
Hivep1 |
T |
C |
13: 42,310,126 (GRCm39) |
F789L |
possibly damaging |
Het |
Hspg2 |
C |
A |
4: 137,279,139 (GRCm39) |
T3074N |
probably damaging |
Het |
Katnb1 |
C |
T |
8: 95,824,300 (GRCm39) |
R495C |
probably damaging |
Het |
Kdm5b |
C |
T |
1: 134,515,741 (GRCm39) |
H122Y |
probably damaging |
Het |
Ky |
C |
T |
9: 102,419,274 (GRCm39) |
S427L |
probably benign |
Het |
Med9 |
T |
G |
11: 59,851,486 (GRCm39) |
V105G |
probably benign |
Het |
Ndufa11 |
T |
A |
17: 57,028,059 (GRCm39) |
V43D |
probably damaging |
Het |
Nlrp4b |
T |
A |
7: 10,448,873 (GRCm39) |
C359S |
possibly damaging |
Het |
Or12k8 |
T |
A |
2: 36,974,921 (GRCm39) |
I280F |
possibly damaging |
Het |
Or51e1 |
A |
T |
7: 102,358,900 (GRCm39) |
K145* |
probably null |
Het |
Paxbp1 |
T |
A |
16: 90,827,401 (GRCm39) |
Y478F |
possibly damaging |
Het |
Pole |
G |
A |
5: 110,480,332 (GRCm39) |
E92K |
probably benign |
Het |
Prom1 |
G |
T |
5: 44,184,110 (GRCm39) |
L449M |
probably damaging |
Het |
Psg28 |
G |
A |
7: 18,164,373 (GRCm39) |
T113I |
probably benign |
Het |
Reln |
A |
C |
5: 22,137,713 (GRCm39) |
V2493G |
possibly damaging |
Het |
Rp1 |
C |
T |
1: 4,416,055 (GRCm39) |
V1686I |
probably benign |
Het |
Setbp1 |
T |
C |
18: 79,129,867 (GRCm39) |
I122V |
probably damaging |
Het |
Setd5 |
T |
C |
6: 113,098,529 (GRCm39) |
Y721H |
probably damaging |
Het |
Shroom1 |
T |
C |
11: 53,354,749 (GRCm39) |
F223S |
probably damaging |
Het |
Son |
T |
A |
16: 91,452,354 (GRCm39) |
L367Q |
probably damaging |
Het |
Spred2 |
G |
T |
11: 19,971,301 (GRCm39) |
D363Y |
probably damaging |
Het |
Tbc1d8 |
T |
G |
1: 39,411,836 (GRCm39) |
Y1000S |
probably benign |
Het |
Tdp2 |
A |
T |
13: 25,022,219 (GRCm39) |
K213* |
probably null |
Het |
Tmem89 |
T |
C |
9: 108,744,545 (GRCm39) |
I146T |
probably damaging |
Het |
Vhl |
T |
C |
6: 113,606,424 (GRCm39) |
V147A |
probably benign |
Het |
Vmn2r23 |
C |
T |
6: 123,690,410 (GRCm39) |
L429F |
probably benign |
Het |
Vrk2 |
T |
C |
11: 26,449,036 (GRCm39) |
D186G |
probably damaging |
Het |
Zbtb40 |
A |
G |
4: 136,710,474 (GRCm39) |
F1222L |
possibly damaging |
Het |
Zfp266 |
A |
G |
9: 20,418,030 (GRCm39) |
S7P |
probably damaging |
Het |
Zfp472 |
T |
A |
17: 33,197,407 (GRCm39) |
I494K |
possibly damaging |
Het |
Zfp655 |
A |
G |
5: 145,181,546 (GRCm39) |
E468G |
probably damaging |
Het |
|
Other mutations in Fgf14 |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL02136:Fgf14
|
APN |
14 |
124,217,784 (GRCm39) |
missense |
possibly damaging |
0.51 |
IGL02733:Fgf14
|
APN |
14 |
124,221,213 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02939:Fgf14
|
APN |
14 |
124,369,891 (GRCm39) |
missense |
possibly damaging |
0.82 |
R0517:Fgf14
|
UTSW |
14 |
124,221,196 (GRCm39) |
missense |
probably damaging |
1.00 |
R0608:Fgf14
|
UTSW |
14 |
124,914,015 (GRCm39) |
missense |
probably damaging |
0.99 |
R1034:Fgf14
|
UTSW |
14 |
124,369,946 (GRCm39) |
missense |
probably damaging |
0.96 |
R1183:Fgf14
|
UTSW |
14 |
124,913,936 (GRCm39) |
missense |
probably benign |
0.03 |
R1466:Fgf14
|
UTSW |
14 |
124,913,951 (GRCm39) |
missense |
probably benign |
0.19 |
R1466:Fgf14
|
UTSW |
14 |
124,913,951 (GRCm39) |
missense |
probably benign |
0.19 |
R1584:Fgf14
|
UTSW |
14 |
124,913,951 (GRCm39) |
missense |
probably benign |
0.19 |
R1768:Fgf14
|
UTSW |
14 |
124,913,924 (GRCm39) |
missense |
probably benign |
0.00 |
R2190:Fgf14
|
UTSW |
14 |
124,221,330 (GRCm39) |
missense |
probably damaging |
1.00 |
R2307:Fgf14
|
UTSW |
14 |
124,221,234 (GRCm39) |
missense |
probably damaging |
1.00 |
R3743:Fgf14
|
UTSW |
14 |
124,914,032 (GRCm39) |
missense |
probably benign |
|
R3847:Fgf14
|
UTSW |
14 |
124,217,801 (GRCm39) |
missense |
probably benign |
0.05 |
R4859:Fgf14
|
UTSW |
14 |
124,429,845 (GRCm39) |
missense |
possibly damaging |
0.78 |
R5655:Fgf14
|
UTSW |
14 |
124,429,828 (GRCm39) |
missense |
probably benign |
|
R6242:Fgf14
|
UTSW |
14 |
124,913,940 (GRCm39) |
missense |
probably benign |
0.02 |
R6958:Fgf14
|
UTSW |
14 |
124,914,009 (GRCm39) |
missense |
probably benign |
|
R7460:Fgf14
|
UTSW |
14 |
124,914,105 (GRCm39) |
missense |
possibly damaging |
0.92 |
R7726:Fgf14
|
UTSW |
14 |
124,373,656 (GRCm39) |
missense |
probably damaging |
1.00 |
R8900:Fgf14
|
UTSW |
14 |
124,221,326 (GRCm39) |
nonsense |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- TCTGAGACAGCATAAGACAAGC -3'
(R):5'- GCTGCTGTCCTGTTATCAATGG -3'
Sequencing Primer
(F):5'- TTTTCCGCCACAGGAGCAG -3'
(R):5'- CAATGGGATTGAGTTCATTCTCAG -3'
|
Posted On |
2016-10-06 |