Incidental Mutation 'R5474:Vmn2r17'
ID 433969
Institutional Source Beutler Lab
Gene Symbol Vmn2r17
Ensembl Gene ENSMUSG00000091879
Gene Name vomeronasal 2, receptor 17
Synonyms EG384221
MMRRC Submission 043035-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.112) question?
Stock # R5474 (G1)
Quality Score 225
Status Not validated
Chromosome 5
Chromosomal Location 109567879-109601253 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to A at 109582150 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Serine to Asparagine at position 513 (S513N)
Ref Sequence ENSEMBL: ENSMUSP00000131450 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000171841]
AlphaFold E9PYF5
Predicted Effect probably damaging
Transcript: ENSMUST00000171841
AA Change: S513N

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000131450
Gene: ENSMUSG00000091879
AA Change: S513N

DomainStartEndE-ValueType
signal peptide 1 24 N/A INTRINSIC
Pfam:ANF_receptor 76 465 7e-26 PFAM
Pfam:NCD3G 508 562 3.5e-18 PFAM
Pfam:7tm_3 593 830 4.8e-55 PFAM
Coding Region Coverage
  • 1x: 98.2%
  • 3x: 97.2%
  • 10x: 95.0%
  • 20x: 90.1%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abcb5 C T 12: 118,904,425 (GRCm39) G122S probably null Het
Ankmy1 T C 1: 92,812,926 (GRCm39) D461G possibly damaging Het
Ascc3 T C 10: 50,725,634 (GRCm39) I2119T probably benign Het
Bud13 G C 9: 46,199,251 (GRCm39) R204T probably damaging Het
Clec4a4 T C 6: 122,989,706 (GRCm39) S116P probably damaging Het
Cnga1 T C 5: 72,762,536 (GRCm39) Y326C probably damaging Het
Cngb1 A T 8: 95,978,597 (GRCm39) I588N probably damaging Het
Cspg5 A T 9: 110,080,076 (GRCm39) I334F probably damaging Het
Cyp2c29 G A 19: 39,313,436 (GRCm39) A350T probably damaging Het
D5Ertd579e G T 5: 36,772,601 (GRCm39) S598Y probably damaging Het
Dgkq A G 5: 108,797,009 (GRCm39) probably null Het
Dnah2 C T 11: 69,349,746 (GRCm39) R2399Q probably benign Het
Dock4 T C 12: 40,795,730 (GRCm39) I849T probably benign Het
Drd4 T C 7: 140,873,641 (GRCm39) W98R probably damaging Het
Duox1 A T 2: 122,177,106 (GRCm39) Q1511L probably benign Het
Gtdc1 A T 2: 44,646,379 (GRCm39) L83Q probably damaging Het
H2-T3 G A 17: 36,500,999 (GRCm39) P6S probably damaging Het
H6pd A G 4: 150,080,546 (GRCm39) C92R probably damaging Het
Ide A G 19: 37,249,583 (GRCm39) V923A unknown Het
Kcnc4 A T 3: 107,355,207 (GRCm39) S414T possibly damaging Het
Krt14 A T 11: 100,095,571 (GRCm39) M278K probably damaging Het
Lrit1 T A 14: 36,783,943 (GRCm39) S424T probably benign Het
Muc4 G A 16: 32,581,635 (GRCm39) S2500N unknown Het
Ncs1 A T 2: 31,170,796 (GRCm39) N70Y probably damaging Het
Nemf C A 12: 69,363,109 (GRCm39) R923L probably benign Het
Nrros T C 16: 31,963,170 (GRCm39) I246M probably benign Het
Or5w13 G A 2: 87,523,401 (GRCm39) S275F probably damaging Het
Or6a2 T A 7: 106,600,296 (GRCm39) Y257F probably damaging Het
Or8g51 T A 9: 38,609,609 (GRCm39) T18S possibly damaging Het
Polb A G 8: 23,120,386 (GRCm39) Y296H probably benign Het
Prrc2a A T 17: 35,378,189 (GRCm39) F440L unknown Het
Prrc2c T C 1: 162,537,213 (GRCm39) probably benign Het
Ptprk C T 10: 28,372,926 (GRCm39) R726* probably null Het
Rnpc3 A T 3: 113,409,158 (GRCm39) L247* probably null Het
Scfd2 C T 5: 74,692,025 (GRCm39) V86I probably benign Het
Sec14l5 A G 16: 4,996,382 (GRCm39) T443A possibly damaging Het
Slc22a29 A G 19: 8,195,221 (GRCm39) V138A probably damaging Het
Usp15 T C 10: 122,963,950 (GRCm39) D524G probably damaging Het
Vav3 A G 3: 109,571,737 (GRCm39) T220A probably benign Het
Zfp84 C T 7: 29,476,514 (GRCm39) S402L probably damaging Het
Zfta A T 19: 7,397,524 (GRCm39) R24W probably damaging Het
Other mutations in Vmn2r17
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00325:Vmn2r17 APN 5 109,575,858 (GRCm39) missense probably benign 0.15
IGL01457:Vmn2r17 APN 5 109,600,898 (GRCm39) missense probably benign 0.00
IGL01527:Vmn2r17 APN 5 109,601,006 (GRCm39) missense probably damaging 1.00
IGL01693:Vmn2r17 APN 5 109,600,384 (GRCm39) missense probably damaging 1.00
IGL01738:Vmn2r17 APN 5 109,577,364 (GRCm39) missense probably damaging 1.00
IGL01767:Vmn2r17 APN 5 109,567,903 (GRCm39) missense probably benign 0.01
IGL01932:Vmn2r17 APN 5 109,574,916 (GRCm39) missense probably benign 0.00
IGL01970:Vmn2r17 APN 5 109,575,813 (GRCm39) missense probably damaging 0.97
IGL02009:Vmn2r17 APN 5 109,600,714 (GRCm39) missense possibly damaging 0.67
IGL02365:Vmn2r17 APN 5 109,601,175 (GRCm39) missense probably damaging 1.00
IGL02385:Vmn2r17 APN 5 109,582,247 (GRCm39) missense probably damaging 1.00
IGL02457:Vmn2r17 APN 5 109,601,012 (GRCm39) missense probably damaging 1.00
IGL02646:Vmn2r17 APN 5 109,600,946 (GRCm39) missense probably damaging 1.00
IGL02741:Vmn2r17 APN 5 109,568,077 (GRCm39) missense probably benign
IGL03213:Vmn2r17 APN 5 109,582,256 (GRCm39) critical splice donor site probably null
IGL03216:Vmn2r17 APN 5 109,600,756 (GRCm39) missense probably damaging 1.00
IGL03342:Vmn2r17 APN 5 109,575,782 (GRCm39) missense probably damaging 1.00
IGL03408:Vmn2r17 APN 5 109,577,238 (GRCm39) splice site probably benign
R0349:Vmn2r17 UTSW 5 109,576,202 (GRCm39) missense probably damaging 1.00
R0418:Vmn2r17 UTSW 5 109,600,747 (GRCm39) missense probably damaging 1.00
R0800:Vmn2r17 UTSW 5 109,575,192 (GRCm39) splice site probably benign
R0836:Vmn2r17 UTSW 5 109,575,822 (GRCm39) missense possibly damaging 0.89
R1715:Vmn2r17 UTSW 5 109,576,110 (GRCm39) missense probably benign 0.00
R1738:Vmn2r17 UTSW 5 109,576,377 (GRCm39) missense probably benign 0.10
R1801:Vmn2r17 UTSW 5 109,576,344 (GRCm39) missense probably damaging 1.00
R2054:Vmn2r17 UTSW 5 109,600,352 (GRCm39) missense probably damaging 0.98
R2060:Vmn2r17 UTSW 5 109,575,075 (GRCm39) missense probably benign 0.00
R2192:Vmn2r17 UTSW 5 109,582,144 (GRCm39) missense possibly damaging 0.81
R2315:Vmn2r17 UTSW 5 109,575,897 (GRCm39) missense probably damaging 1.00
R2374:Vmn2r17 UTSW 5 109,575,104 (GRCm39) missense probably benign
R3612:Vmn2r17 UTSW 5 109,577,463 (GRCm39) missense probably benign 0.00
R3832:Vmn2r17 UTSW 5 109,576,262 (GRCm39) missense probably damaging 1.00
R4273:Vmn2r17 UTSW 5 109,600,832 (GRCm39) missense probably benign 0.44
R4494:Vmn2r17 UTSW 5 109,576,335 (GRCm39) missense probably damaging 1.00
R4597:Vmn2r17 UTSW 5 109,577,428 (GRCm39) missense probably benign 0.01
R4675:Vmn2r17 UTSW 5 109,575,049 (GRCm39) missense probably benign 0.00
R4701:Vmn2r17 UTSW 5 109,575,849 (GRCm39) missense probably damaging 0.99
R4754:Vmn2r17 UTSW 5 109,600,715 (GRCm39) missense probably damaging 0.99
R4841:Vmn2r17 UTSW 5 109,582,246 (GRCm39) missense probably damaging 1.00
R4842:Vmn2r17 UTSW 5 109,582,246 (GRCm39) missense probably damaging 1.00
R4865:Vmn2r17 UTSW 5 109,574,985 (GRCm39) missense probably damaging 1.00
R4902:Vmn2r17 UTSW 5 109,601,220 (GRCm39) missense probably benign 0.14
R4989:Vmn2r17 UTSW 5 109,575,739 (GRCm39) missense probably benign 0.07
R5101:Vmn2r17 UTSW 5 109,576,217 (GRCm39) missense probably damaging 0.99
R5109:Vmn2r17 UTSW 5 109,577,342 (GRCm39) missense probably benign 0.06
R5123:Vmn2r17 UTSW 5 109,575,774 (GRCm39) missense possibly damaging 0.90
R5485:Vmn2r17 UTSW 5 109,567,972 (GRCm39) missense probably benign 0.06
R5611:Vmn2r17 UTSW 5 109,576,030 (GRCm39) missense probably damaging 0.97
R5652:Vmn2r17 UTSW 5 109,577,430 (GRCm39) missense probably benign 0.10
R5717:Vmn2r17 UTSW 5 109,575,140 (GRCm39) missense possibly damaging 0.94
R5735:Vmn2r17 UTSW 5 109,600,716 (GRCm39) missense possibly damaging 0.67
R5766:Vmn2r17 UTSW 5 109,575,139 (GRCm39) missense possibly damaging 0.46
R6645:Vmn2r17 UTSW 5 109,576,247 (GRCm39) missense probably damaging 1.00
R6786:Vmn2r17 UTSW 5 109,575,695 (GRCm39) missense probably benign 0.30
R6821:Vmn2r17 UTSW 5 109,577,331 (GRCm39) missense probably damaging 1.00
R6979:Vmn2r17 UTSW 5 109,576,265 (GRCm39) missense possibly damaging 0.46
R6984:Vmn2r17 UTSW 5 109,600,533 (GRCm39) missense probably benign 0.10
R7269:Vmn2r17 UTSW 5 109,576,337 (GRCm39) missense possibly damaging 0.88
R7509:Vmn2r17 UTSW 5 109,575,695 (GRCm39) missense probably benign 0.30
R7736:Vmn2r17 UTSW 5 109,600,757 (GRCm39) missense probably benign 0.05
R7789:Vmn2r17 UTSW 5 109,600,831 (GRCm39) missense possibly damaging 0.77
R7814:Vmn2r17 UTSW 5 109,575,739 (GRCm39) missense probably benign 0.07
R7847:Vmn2r17 UTSW 5 109,568,063 (GRCm39) missense probably damaging 1.00
R7863:Vmn2r17 UTSW 5 109,568,035 (GRCm39) missense probably benign
R7893:Vmn2r17 UTSW 5 109,575,944 (GRCm39) missense probably benign 0.05
R8234:Vmn2r17 UTSW 5 109,601,235 (GRCm39) missense probably benign 0.01
R8382:Vmn2r17 UTSW 5 109,576,387 (GRCm39) missense probably benign 0.01
R8435:Vmn2r17 UTSW 5 109,576,172 (GRCm39) missense probably benign 0.01
R8465:Vmn2r17 UTSW 5 109,600,691 (GRCm39) missense probably damaging 0.99
R8555:Vmn2r17 UTSW 5 109,600,810 (GRCm39) missense probably damaging 0.99
R8900:Vmn2r17 UTSW 5 109,575,863 (GRCm39) missense probably benign 0.25
R9293:Vmn2r17 UTSW 5 109,600,712 (GRCm39) missense probably damaging 1.00
R9308:Vmn2r17 UTSW 5 109,600,505 (GRCm39) missense probably damaging 0.98
R9378:Vmn2r17 UTSW 5 109,575,732 (GRCm39) missense possibly damaging 0.94
R9597:Vmn2r17 UTSW 5 109,575,669 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- TTCAGGACATTGGAGGTTTACAC -3'
(R):5'- AGGACTCCCATTTCCATCTAGGC -3'

Sequencing Primer
(F):5'- GGTTTACACAAAATAGTAAAGTGCC -3'
(R):5'- GCCATCTTCTATTTTACTTTGGAAAG -3'
Posted On 2016-10-06