Incidental Mutation 'R5540:Kdm5b'
ID |
435854 |
Institutional Source |
Beutler Lab
|
Gene Symbol |
Kdm5b
|
Ensembl Gene |
ENSMUSG00000042207 |
Gene Name |
lysine demethylase 5B |
Synonyms |
2010009J12Rik, PLU-1, Rb-Bp2, Jarid1b, D1Ertd202e, Plu1, 2210016I17Rik |
MMRRC Submission |
043098-MU
|
Accession Numbers |
|
Essential gene? |
Possibly non essential
(E-score: 0.451)
|
Stock # |
R5540 (G1)
|
Quality Score |
225 |
Status
|
Not validated
|
Chromosome |
1 |
Chromosomal Location |
134487916-134560621 bp(+) (GRCm39) |
Type of Mutation |
missense |
DNA Base Change (assembly) |
A to G
at 134558979 bp (GRCm39)
|
Zygosity |
Heterozygous |
Amino Acid Change |
Aspartic acid to Glycine
at position 1501
(D1501G)
|
Ref Sequence |
ENSEMBL: ENSMUSP00000038138
(fasta)
|
Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000047714]
[ENSMUST00000112198]
|
AlphaFold |
Q80Y84 |
Predicted Effect |
probably damaging
Transcript: ENSMUST00000047714
AA Change: D1501G
PolyPhen 2
Score 0.980 (Sensitivity: 0.75; Specificity: 0.96)
|
SMART Domains |
Protein: ENSMUSP00000038138 Gene: ENSMUSG00000042207 AA Change: D1501G
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
30 |
N/A |
INTRINSIC |
JmjN
|
31 |
72 |
2.87e-20 |
SMART |
ARID
|
94 |
183 |
7.39e-32 |
SMART |
BRIGHT
|
98 |
188 |
1.51e-35 |
SMART |
low complexity region
|
228 |
239 |
N/A |
INTRINSIC |
PHD
|
311 |
357 |
6.15e-14 |
SMART |
JmjC
|
453 |
619 |
2.33e-67 |
SMART |
Pfam:zf-C5HC2
|
692 |
744 |
2.2e-17 |
PFAM |
Pfam:PLU-1
|
757 |
1088 |
5.6e-92 |
PFAM |
low complexity region
|
1097 |
1109 |
N/A |
INTRINSIC |
PHD
|
1178 |
1222 |
6.2e-10 |
SMART |
low complexity region
|
1225 |
1236 |
N/A |
INTRINSIC |
low complexity region
|
1406 |
1417 |
N/A |
INTRINSIC |
low complexity region
|
1470 |
1484 |
N/A |
INTRINSIC |
PHD
|
1486 |
1536 |
1.18e-6 |
SMART |
|
Predicted Effect |
probably benign
Transcript: ENSMUST00000112198
|
SMART Domains |
Protein: ENSMUSP00000107817 Gene: ENSMUSG00000042207
Domain | Start | End | E-Value | Type |
low complexity region
|
7 |
30 |
N/A |
INTRINSIC |
JmjN
|
31 |
72 |
2.87e-20 |
SMART |
ARID
|
94 |
183 |
7.39e-32 |
SMART |
BRIGHT
|
98 |
188 |
1.51e-35 |
SMART |
low complexity region
|
228 |
239 |
N/A |
INTRINSIC |
PHD
|
311 |
357 |
6.15e-14 |
SMART |
JmjC
|
453 |
619 |
2.33e-67 |
SMART |
Pfam:zf-C5HC2
|
692 |
745 |
6.7e-21 |
PFAM |
Pfam:PLU-1
|
756 |
1088 |
6e-94 |
PFAM |
low complexity region
|
1097 |
1109 |
N/A |
INTRINSIC |
PHD
|
1178 |
1222 |
6.2e-10 |
SMART |
low complexity region
|
1225 |
1236 |
N/A |
INTRINSIC |
low complexity region
|
1406 |
1417 |
N/A |
INTRINSIC |
low complexity region
|
1470 |
1484 |
N/A |
INTRINSIC |
|
Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000191572
|
Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.7%
- 10x: 98.6%
- 20x: 96.1%
|
Validation Efficiency |
|
MGI Phenotype |
FUNCTION: This gene encodes a lysine-specific histone demethylase that belongs to the jumonji/ARID domain-containing family of histone demethylases. The encoded protein is capable of demethylating tri-, di- and monomethylated lysine 4 of histone H3. This protein plays a role in the transcriptional repression or certain tumor suppressor genes and is upregulated in certain cancer cells. This protein may also play a role in genome stability and DNA repair. Homozygous mutant mice display decreased body weight, decreased female fertility, lower uterine weight, and a delay in mammary development. Knockout of this gene has also been associated with embryonic lethality. [provided by RefSeq, Dec 2016] PHENOTYPE: Mice homozygous for a gene trapped allele exhibit decreased body weight, background-sensitive premature mortality, decreased female fertility, delayed mammary gland development, decreased serum estradiol levels, and reduced mammary epithelial cell proliferation in early puberty. [provided by MGI curators]
|
Allele List at MGI |
|
Other mutations in this stock |
Total: 74 list
Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
1700008O03Rik |
A |
G |
7: 44,012,371 (GRCm39) |
S15P |
probably damaging |
Het |
Actl7a |
A |
T |
4: 56,744,388 (GRCm39) |
H305L |
probably benign |
Het |
Adam26b |
C |
A |
8: 43,974,654 (GRCm39) |
C116F |
probably damaging |
Het |
Adgrl2 |
A |
G |
3: 148,543,198 (GRCm39) |
|
probably null |
Het |
Akr1b10 |
A |
G |
6: 34,371,047 (GRCm39) |
T238A |
probably damaging |
Het |
Akr1c18 |
A |
G |
13: 4,187,178 (GRCm39) |
V186A |
probably benign |
Het |
Alpk3 |
G |
A |
7: 80,745,184 (GRCm39) |
V1311M |
probably damaging |
Het |
Aox1 |
A |
G |
1: 58,143,569 (GRCm39) |
N1229S |
probably benign |
Het |
Apobec3 |
T |
A |
15: 79,782,120 (GRCm39) |
N43K |
probably benign |
Het |
Arid1a |
A |
C |
4: 133,407,765 (GRCm39) |
D2247E |
unknown |
Het |
Asph |
A |
G |
4: 9,635,906 (GRCm39) |
L77S |
probably damaging |
Het |
Cd300ld |
T |
A |
11: 114,878,231 (GRCm39) |
T94S |
probably damaging |
Het |
Celf2 |
T |
C |
2: 6,558,743 (GRCm39) |
T382A |
probably benign |
Het |
Cfap54 |
C |
T |
10: 92,808,470 (GRCm39) |
A1402T |
possibly damaging |
Het |
Chrnb1 |
A |
T |
11: 69,686,476 (GRCm39) |
V48E |
probably benign |
Het |
Col6a5 |
T |
A |
9: 105,739,975 (GRCm39) |
E2548V |
probably benign |
Het |
Crebrf |
A |
G |
17: 26,961,071 (GRCm39) |
D56G |
possibly damaging |
Het |
Dctn5 |
A |
G |
7: 121,734,275 (GRCm39) |
T40A |
probably benign |
Het |
Dmxl2 |
A |
T |
9: 54,301,141 (GRCm39) |
N2323K |
probably benign |
Het |
Dync1h1 |
A |
G |
12: 110,627,384 (GRCm39) |
Q4021R |
probably benign |
Het |
Dyrk1a |
T |
G |
16: 94,486,202 (GRCm39) |
|
probably null |
Het |
Ephb3 |
T |
A |
16: 21,039,610 (GRCm39) |
F454Y |
probably damaging |
Het |
Fbxo38 |
A |
G |
18: 62,647,864 (GRCm39) |
|
probably null |
Het |
Flg |
T |
C |
3: 93,184,923 (GRCm39) |
F15S |
probably damaging |
Het |
Fndc3b |
G |
A |
3: 27,555,651 (GRCm39) |
P301L |
probably damaging |
Het |
Fpr-rs7 |
C |
T |
17: 20,334,356 (GRCm39) |
G45R |
probably damaging |
Het |
Garin3 |
A |
G |
11: 46,295,715 (GRCm39) |
N29S |
probably damaging |
Het |
Gfi1 |
T |
A |
5: 107,867,991 (GRCm39) |
T360S |
probably damaging |
Het |
Grik4 |
T |
C |
9: 42,432,243 (GRCm39) |
H918R |
probably damaging |
Het |
Hpx |
A |
G |
7: 105,241,119 (GRCm39) |
S385P |
possibly damaging |
Het |
Kif20b |
A |
T |
19: 34,915,860 (GRCm39) |
M546L |
probably benign |
Het |
Map3k9 |
G |
T |
12: 81,819,587 (GRCm39) |
N222K |
probably damaging |
Het |
Me1 |
A |
G |
9: 86,561,926 (GRCm39) |
L53P |
possibly damaging |
Het |
Mis18bp1 |
T |
C |
12: 65,195,520 (GRCm39) |
E748G |
possibly damaging |
Het |
Morc3 |
T |
A |
16: 93,644,268 (GRCm39) |
N186K |
probably benign |
Het |
Mtor |
A |
G |
4: 148,539,165 (GRCm39) |
T221A |
probably benign |
Het |
Muc6 |
A |
G |
7: 141,235,850 (GRCm39) |
|
probably null |
Het |
Myh8 |
C |
A |
11: 67,177,266 (GRCm39) |
T444N |
probably benign |
Het |
Myo7b |
A |
G |
18: 32,140,143 (GRCm39) |
Y216H |
probably damaging |
Het |
Myom1 |
G |
A |
17: 71,416,782 (GRCm39) |
V1382M |
probably damaging |
Het |
Nbeal2 |
A |
T |
9: 110,460,801 (GRCm39) |
Y1718N |
probably damaging |
Het |
Npc1l1 |
A |
G |
11: 6,164,546 (GRCm39) |
S1168P |
probably damaging |
Het |
Or4c58 |
A |
G |
2: 89,675,011 (GRCm39) |
F102S |
probably damaging |
Het |
Or4d2 |
T |
A |
11: 87,784,511 (GRCm39) |
K80* |
probably null |
Het |
Or51f5 |
C |
T |
7: 102,424,136 (GRCm39) |
A135V |
probably benign |
Het |
Or5an9 |
T |
A |
19: 12,187,824 (GRCm39) |
I298N |
probably damaging |
Het |
Or6c8b |
G |
T |
10: 128,882,364 (GRCm39) |
D189E |
probably damaging |
Het |
Pcdha4 |
C |
A |
18: 37,087,890 (GRCm39) |
A691E |
probably benign |
Het |
Pde6a |
T |
G |
18: 61,364,438 (GRCm39) |
F165V |
probably damaging |
Het |
Ptpn14 |
A |
T |
1: 189,578,561 (GRCm39) |
M340L |
probably benign |
Het |
Rnasel |
G |
T |
1: 153,630,890 (GRCm39) |
E469* |
probably null |
Het |
Rsph3a |
T |
G |
17: 8,164,790 (GRCm39) |
L50R |
probably benign |
Het |
Rusc2 |
A |
G |
4: 43,423,975 (GRCm39) |
Y1043C |
probably damaging |
Het |
Serpinb6b |
A |
T |
13: 33,161,541 (GRCm39) |
K86* |
probably null |
Het |
Serpine1 |
T |
C |
5: 137,092,063 (GRCm39) |
T392A |
probably benign |
Het |
Shcbp1 |
A |
T |
8: 4,794,529 (GRCm39) |
D421E |
probably damaging |
Het |
Slc24a1 |
A |
G |
9: 64,855,863 (GRCm39) |
V348A |
unknown |
Het |
Slc26a7 |
A |
G |
4: 14,506,621 (GRCm39) |
F605L |
probably benign |
Het |
Slc66a1 |
A |
T |
4: 139,027,655 (GRCm39) |
L229Q |
probably damaging |
Het |
Spag17 |
A |
C |
3: 99,963,588 (GRCm39) |
E1102A |
possibly damaging |
Het |
Stab2 |
A |
G |
10: 86,683,989 (GRCm39) |
V2390A |
probably benign |
Het |
Stk11 |
A |
G |
10: 79,961,883 (GRCm39) |
I35V |
probably benign |
Het |
Stk24 |
T |
C |
14: 121,531,693 (GRCm39) |
D321G |
possibly damaging |
Het |
Tbx4 |
A |
T |
11: 85,801,994 (GRCm39) |
N209I |
possibly damaging |
Het |
Tmem225 |
T |
C |
9: 40,060,681 (GRCm39) |
L80P |
probably damaging |
Het |
Tnfrsf4 |
C |
T |
4: 156,098,380 (GRCm39) |
T17I |
probably benign |
Het |
Traf3ip1 |
G |
A |
1: 91,429,037 (GRCm39) |
R268Q |
probably benign |
Het |
Trhde |
T |
A |
10: 114,636,497 (GRCm39) |
I237F |
probably benign |
Het |
Ugt2a1 |
A |
T |
5: 87,633,915 (GRCm39) |
W231R |
probably damaging |
Het |
Vash1 |
ACTGCTGCTGCTGCTGCTGC |
ACTGCTGCTGCTGCTGC |
12: 86,726,831 (GRCm39) |
|
probably benign |
Het |
Vps16 |
T |
A |
2: 130,284,305 (GRCm39) |
D685E |
probably benign |
Het |
Washc4 |
A |
G |
10: 83,409,657 (GRCm39) |
D602G |
probably damaging |
Het |
Wdr59 |
A |
G |
8: 112,211,816 (GRCm39) |
L377P |
possibly damaging |
Het |
Wdr81 |
T |
C |
11: 75,339,896 (GRCm39) |
E1364G |
probably damaging |
Het |
|
Other mutations in Kdm5b |
Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
IGL00230:Kdm5b
|
APN |
1 |
134,548,693 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01458:Kdm5b
|
APN |
1 |
134,549,724 (GRCm39) |
missense |
possibly damaging |
0.53 |
IGL01567:Kdm5b
|
APN |
1 |
134,530,278 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL01625:Kdm5b
|
APN |
1 |
134,545,706 (GRCm39) |
missense |
possibly damaging |
0.74 |
IGL01970:Kdm5b
|
APN |
1 |
134,528,465 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL02183:Kdm5b
|
APN |
1 |
134,552,669 (GRCm39) |
missense |
probably benign |
0.09 |
IGL02592:Kdm5b
|
APN |
1 |
134,552,591 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL02695:Kdm5b
|
APN |
1 |
134,532,223 (GRCm39) |
missense |
possibly damaging |
0.94 |
IGL02697:Kdm5b
|
APN |
1 |
134,516,511 (GRCm39) |
splice site |
probably benign |
|
IGL03036:Kdm5b
|
APN |
1 |
134,536,675 (GRCm39) |
missense |
probably damaging |
1.00 |
IGL03056:Kdm5b
|
APN |
1 |
134,515,717 (GRCm39) |
missense |
probably damaging |
0.99 |
IGL03206:Kdm5b
|
APN |
1 |
134,555,055 (GRCm39) |
missense |
probably benign |
|
IGL03342:Kdm5b
|
APN |
1 |
134,530,314 (GRCm39) |
missense |
probably benign |
0.00 |
IGL03388:Kdm5b
|
APN |
1 |
134,555,060 (GRCm39) |
missense |
probably benign |
|
amaryllis
|
UTSW |
1 |
134,536,799 (GRCm39) |
critical splice donor site |
probably null |
|
PIT4486001:Kdm5b
|
UTSW |
1 |
134,556,423 (GRCm39) |
missense |
probably damaging |
1.00 |
R0233:Kdm5b
|
UTSW |
1 |
134,532,372 (GRCm39) |
splice site |
probably benign |
|
R0334:Kdm5b
|
UTSW |
1 |
134,532,260 (GRCm39) |
missense |
probably damaging |
0.99 |
R0504:Kdm5b
|
UTSW |
1 |
134,548,761 (GRCm39) |
critical splice donor site |
probably null |
|
R0505:Kdm5b
|
UTSW |
1 |
134,530,309 (GRCm39) |
missense |
probably damaging |
0.96 |
R0521:Kdm5b
|
UTSW |
1 |
134,545,771 (GRCm39) |
missense |
possibly damaging |
0.65 |
R1004:Kdm5b
|
UTSW |
1 |
134,516,642 (GRCm39) |
missense |
possibly damaging |
0.71 |
R1087:Kdm5b
|
UTSW |
1 |
134,528,375 (GRCm39) |
missense |
probably damaging |
1.00 |
R1126:Kdm5b
|
UTSW |
1 |
134,541,729 (GRCm39) |
missense |
possibly damaging |
0.90 |
R1221:Kdm5b
|
UTSW |
1 |
134,526,829 (GRCm39) |
missense |
probably damaging |
0.98 |
R1230:Kdm5b
|
UTSW |
1 |
134,540,992 (GRCm39) |
missense |
probably damaging |
1.00 |
R1345:Kdm5b
|
UTSW |
1 |
134,558,288 (GRCm39) |
missense |
possibly damaging |
0.94 |
R1482:Kdm5b
|
UTSW |
1 |
134,552,635 (GRCm39) |
missense |
probably damaging |
1.00 |
R1582:Kdm5b
|
UTSW |
1 |
134,552,591 (GRCm39) |
missense |
probably damaging |
0.99 |
R1653:Kdm5b
|
UTSW |
1 |
134,530,219 (GRCm39) |
missense |
probably damaging |
1.00 |
R1693:Kdm5b
|
UTSW |
1 |
134,525,314 (GRCm39) |
splice site |
probably benign |
|
R1721:Kdm5b
|
UTSW |
1 |
134,540,919 (GRCm39) |
splice site |
probably benign |
|
R1741:Kdm5b
|
UTSW |
1 |
134,545,755 (GRCm39) |
missense |
possibly damaging |
0.82 |
R1762:Kdm5b
|
UTSW |
1 |
134,532,205 (GRCm39) |
nonsense |
probably null |
|
R1820:Kdm5b
|
UTSW |
1 |
134,525,408 (GRCm39) |
missense |
possibly damaging |
0.87 |
R1872:Kdm5b
|
UTSW |
1 |
134,552,732 (GRCm39) |
missense |
probably damaging |
1.00 |
R1966:Kdm5b
|
UTSW |
1 |
134,541,611 (GRCm39) |
splice site |
probably null |
|
R2056:Kdm5b
|
UTSW |
1 |
134,540,952 (GRCm39) |
missense |
probably benign |
0.05 |
R2059:Kdm5b
|
UTSW |
1 |
134,540,952 (GRCm39) |
missense |
probably benign |
0.05 |
R2405:Kdm5b
|
UTSW |
1 |
134,536,754 (GRCm39) |
missense |
probably damaging |
0.97 |
R3417:Kdm5b
|
UTSW |
1 |
134,515,715 (GRCm39) |
missense |
probably damaging |
1.00 |
R3771:Kdm5b
|
UTSW |
1 |
134,541,083 (GRCm39) |
missense |
probably damaging |
1.00 |
R3783:Kdm5b
|
UTSW |
1 |
134,558,280 (GRCm39) |
missense |
probably benign |
|
R3803:Kdm5b
|
UTSW |
1 |
134,543,679 (GRCm39) |
missense |
probably benign |
0.07 |
R3980:Kdm5b
|
UTSW |
1 |
134,547,408 (GRCm39) |
missense |
probably benign |
0.11 |
R3983:Kdm5b
|
UTSW |
1 |
134,559,042 (GRCm39) |
missense |
possibly damaging |
0.91 |
R4013:Kdm5b
|
UTSW |
1 |
134,555,067 (GRCm39) |
missense |
possibly damaging |
0.86 |
R4162:Kdm5b
|
UTSW |
1 |
134,552,899 (GRCm39) |
missense |
probably benign |
0.01 |
R4701:Kdm5b
|
UTSW |
1 |
134,533,750 (GRCm39) |
intron |
probably benign |
|
R4791:Kdm5b
|
UTSW |
1 |
134,558,538 (GRCm39) |
missense |
possibly damaging |
0.82 |
R4836:Kdm5b
|
UTSW |
1 |
134,521,053 (GRCm39) |
splice site |
probably null |
|
R4924:Kdm5b
|
UTSW |
1 |
134,559,089 (GRCm39) |
missense |
probably benign |
0.00 |
R5135:Kdm5b
|
UTSW |
1 |
134,516,484 (GRCm39) |
intron |
probably benign |
|
R5248:Kdm5b
|
UTSW |
1 |
134,548,735 (GRCm39) |
missense |
probably benign |
0.11 |
R5290:Kdm5b
|
UTSW |
1 |
134,549,837 (GRCm39) |
splice site |
probably null |
|
R5358:Kdm5b
|
UTSW |
1 |
134,535,432 (GRCm39) |
nonsense |
probably null |
|
R5388:Kdm5b
|
UTSW |
1 |
134,536,635 (GRCm39) |
nonsense |
probably null |
|
R5396:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5397:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5398:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5399:Kdm5b
|
UTSW |
1 |
134,549,836 (GRCm39) |
splice site |
probably null |
|
R5529:Kdm5b
|
UTSW |
1 |
134,515,741 (GRCm39) |
missense |
probably damaging |
1.00 |
R5661:Kdm5b
|
UTSW |
1 |
134,526,811 (GRCm39) |
missense |
probably benign |
0.01 |
R5663:Kdm5b
|
UTSW |
1 |
134,558,373 (GRCm39) |
missense |
probably benign |
|
R5822:Kdm5b
|
UTSW |
1 |
134,516,511 (GRCm39) |
splice site |
probably benign |
|
R6226:Kdm5b
|
UTSW |
1 |
134,536,616 (GRCm39) |
missense |
probably damaging |
0.99 |
R6368:Kdm5b
|
UTSW |
1 |
134,526,945 (GRCm39) |
missense |
probably damaging |
1.00 |
R6681:Kdm5b
|
UTSW |
1 |
134,541,007 (GRCm39) |
missense |
possibly damaging |
0.90 |
R6715:Kdm5b
|
UTSW |
1 |
134,536,799 (GRCm39) |
critical splice donor site |
probably null |
|
R7132:Kdm5b
|
UTSW |
1 |
134,526,844 (GRCm39) |
missense |
probably damaging |
1.00 |
R7202:Kdm5b
|
UTSW |
1 |
134,552,497 (GRCm39) |
missense |
probably benign |
|
R7258:Kdm5b
|
UTSW |
1 |
134,548,759 (GRCm39) |
missense |
probably damaging |
1.00 |
R7335:Kdm5b
|
UTSW |
1 |
134,488,177 (GRCm39) |
missense |
probably damaging |
1.00 |
R7420:Kdm5b
|
UTSW |
1 |
134,532,235 (GRCm39) |
missense |
probably benign |
0.14 |
R7426:Kdm5b
|
UTSW |
1 |
134,523,571 (GRCm39) |
missense |
probably benign |
0.02 |
R7452:Kdm5b
|
UTSW |
1 |
134,552,686 (GRCm39) |
missense |
probably damaging |
1.00 |
R7595:Kdm5b
|
UTSW |
1 |
134,536,704 (GRCm39) |
missense |
probably benign |
0.00 |
R7612:Kdm5b
|
UTSW |
1 |
134,552,656 (GRCm39) |
nonsense |
probably null |
|
R7704:Kdm5b
|
UTSW |
1 |
134,515,669 (GRCm39) |
missense |
probably damaging |
1.00 |
R7846:Kdm5b
|
UTSW |
1 |
134,545,578 (GRCm39) |
missense |
probably damaging |
1.00 |
R8115:Kdm5b
|
UTSW |
1 |
134,547,411 (GRCm39) |
missense |
possibly damaging |
0.83 |
R8146:Kdm5b
|
UTSW |
1 |
134,552,864 (GRCm39) |
missense |
probably benign |
0.05 |
R8160:Kdm5b
|
UTSW |
1 |
134,541,657 (GRCm39) |
missense |
probably damaging |
1.00 |
R8527:Kdm5b
|
UTSW |
1 |
134,533,512 (GRCm39) |
missense |
possibly damaging |
0.78 |
R8542:Kdm5b
|
UTSW |
1 |
134,533,512 (GRCm39) |
missense |
possibly damaging |
0.78 |
R8930:Kdm5b
|
UTSW |
1 |
134,544,010 (GRCm39) |
missense |
probably damaging |
1.00 |
R8932:Kdm5b
|
UTSW |
1 |
134,544,010 (GRCm39) |
missense |
probably damaging |
1.00 |
R8950:Kdm5b
|
UTSW |
1 |
134,541,664 (GRCm39) |
missense |
possibly damaging |
0.84 |
R9089:Kdm5b
|
UTSW |
1 |
134,535,506 (GRCm39) |
missense |
probably damaging |
0.98 |
R9109:Kdm5b
|
UTSW |
1 |
134,528,493 (GRCm39) |
critical splice donor site |
probably null |
|
R9133:Kdm5b
|
UTSW |
1 |
134,530,323 (GRCm39) |
missense |
probably benign |
|
R9298:Kdm5b
|
UTSW |
1 |
134,528,493 (GRCm39) |
critical splice donor site |
probably null |
|
R9423:Kdm5b
|
UTSW |
1 |
134,515,705 (GRCm39) |
missense |
possibly damaging |
0.85 |
R9630:Kdm5b
|
UTSW |
1 |
134,512,971 (GRCm39) |
critical splice donor site |
probably null |
|
R9670:Kdm5b
|
UTSW |
1 |
134,558,240 (GRCm39) |
nonsense |
probably null |
|
X0063:Kdm5b
|
UTSW |
1 |
134,516,614 (GRCm39) |
missense |
probably benign |
0.07 |
Z1176:Kdm5b
|
UTSW |
1 |
134,552,773 (GRCm39) |
missense |
probably damaging |
1.00 |
Z1177:Kdm5b
|
UTSW |
1 |
134,523,536 (GRCm39) |
frame shift |
probably null |
|
|
Predicted Primers |
PCR Primer
(F):5'- TTTGCTTACTGTCACAGGGC -3'
(R):5'- AGCTTTGCTGAGATTGAGGAAATC -3'
Sequencing Primer
(F):5'- TTACTGTCACAGGGCAGCACTG -3'
(R):5'- GAGGAAATCTTCTTTATTGGAGTCC -3'
|
Posted On |
2016-10-24 |