Incidental Mutation 'R5545:Or2o1'
| ID |
436194 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or2o1
|
| Ensembl Gene |
ENSMUSG00000048378 |
| Gene Name |
olfactory receptor family 2 subfamily O member 1 |
| Synonyms |
MOR280-1, Olfr1394, GA_x6K02T2QP88-6274566-6273628 |
| MMRRC Submission |
043103-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.063)
|
| Stock # |
R5545 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
11 |
| Chromosomal Location |
49050843-49051781 bp(+) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
G to A
at 49051453 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Cysteine to Tyrosine
at position 204
(C204Y)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149520
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000046522]
[ENSMUST00000052668]
[ENSMUST00000216273]
|
| AlphaFold |
Q8VET2 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000046522
|
| SMART Domains |
Protein: ENSMUSP00000046229
Gene: ENSMUSG00000040283
| Domain | Start | End | E-Value | Type |
|---|
|
IG
|
44 |
151 |
1.24e-8 |
SMART |
|
Pfam:Ig_2
|
155 |
243 |
9.2e-3 |
PFAM |
|
Pfam:C2-set_2
|
156 |
238 |
1.7e-9 |
PFAM |
|
transmembrane domain
|
259 |
281 |
N/A |
INTRINSIC |
|
PRY
|
324 |
377 |
8.68e-14 |
SMART |
|
SPRY
|
378 |
503 |
1.3e-18 |
SMART |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000052668
AA Change: C204Y
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| SMART Domains |
Protein: ENSMUSP00000063062
Gene: ENSMUSG00000048378
AA Change: C204Y
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
30 |
309 |
6.5e-53 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
37 |
233 |
3e-5 |
PFAM |
|
Pfam:7tm_1
|
43 |
292 |
2.1e-24 |
PFAM |
|
| Predicted Effect |
probably damaging
Transcript: ENSMUST00000216273
AA Change: C204Y
PolyPhen 2
Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
|
| Coding Region Coverage |
- 1x: 99.9%
- 3x: 99.7%
- 10x: 98.5%
- 20x: 95.9%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 28 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 2410004B18Rik |
T |
C |
3: 145,644,853 (GRCm39) |
|
probably null |
Het |
| Acot5 |
G |
A |
12: 84,116,380 (GRCm39) |
R47Q |
possibly damaging |
Het |
| Akr1c19 |
A |
T |
13: 4,292,594 (GRCm39) |
Y205F |
probably benign |
Het |
| Cdh6 |
T |
C |
15: 13,041,235 (GRCm39) |
Y564C |
probably damaging |
Het |
| Cngb1 |
A |
G |
8: 95,978,801 (GRCm39) |
S551P |
|
Het |
| Cyp20a1 |
T |
C |
1: 60,415,241 (GRCm39) |
I289T |
possibly damaging |
Het |
| Herc6 |
A |
T |
6: 57,634,992 (GRCm39) |
|
probably null |
Het |
| Ifnar2 |
G |
A |
16: 91,181,913 (GRCm39) |
|
probably null |
Het |
| Kcnd2 |
A |
G |
6: 21,217,018 (GRCm39) |
T241A |
probably damaging |
Het |
| Nfatc2ip |
T |
A |
7: 125,989,642 (GRCm39) |
E247D |
possibly damaging |
Het |
| Or2k2 |
T |
G |
4: 58,785,585 (GRCm39) |
I46L |
probably benign |
Het |
| Pate10 |
A |
G |
9: 35,652,940 (GRCm39) |
I61V |
probably benign |
Het |
| Plekhg2 |
T |
C |
7: 28,061,886 (GRCm39) |
E638G |
probably damaging |
Het |
| Plin1 |
T |
C |
7: 79,376,257 (GRCm39) |
T160A |
probably benign |
Het |
| Prox1 |
T |
A |
1: 189,879,339 (GRCm39) |
N613I |
probably damaging |
Het |
| Ptpn13 |
A |
G |
5: 103,709,830 (GRCm39) |
S1498G |
probably damaging |
Het |
| Ralbp1 |
C |
T |
17: 66,157,099 (GRCm39) |
R598Q |
possibly damaging |
Het |
| Robo2 |
A |
C |
16: 73,758,635 (GRCm39) |
V712G |
probably damaging |
Het |
| Rsl1d1 |
A |
G |
16: 11,017,514 (GRCm39) |
F151L |
probably damaging |
Het |
| Scrn3 |
T |
A |
2: 73,166,125 (GRCm39) |
I386N |
possibly damaging |
Het |
| Sorl1 |
T |
A |
9: 41,902,921 (GRCm39) |
Y1591F |
probably benign |
Het |
| Tbr1 |
T |
G |
2: 61,637,720 (GRCm39) |
V93G |
possibly damaging |
Het |
| Tmem229b |
A |
G |
12: 79,011,583 (GRCm39) |
I116T |
probably damaging |
Het |
| Ttn |
T |
C |
2: 76,594,720 (GRCm39) |
Q12115R |
possibly damaging |
Het |
| Ube3a |
C |
T |
7: 58,921,772 (GRCm39) |
T48M |
probably damaging |
Het |
| Vnn3 |
A |
G |
10: 23,742,992 (GRCm39) |
I401V |
probably benign |
Het |
| Wdr90 |
C |
T |
17: 26,064,830 (GRCm39) |
R1744H |
probably damaging |
Het |
| Zc3h7a |
T |
C |
16: 10,966,315 (GRCm39) |
D604G |
possibly damaging |
Het |
|
| Other mutations in Or2o1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01525:Or2o1
|
APN |
11 |
49,051,501 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01603:Or2o1
|
APN |
11 |
49,051,438 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01736:Or2o1
|
APN |
11 |
49,051,354 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02246:Or2o1
|
APN |
11 |
49,050,921 (GRCm39) |
missense |
probably benign |
0.44 |
|
IGL02321:Or2o1
|
APN |
11 |
49,051,602 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL03405:Or2o1
|
APN |
11 |
49,051,713 (GRCm39) |
splice site |
probably null |
|
|
R0358:Or2o1
|
UTSW |
11 |
49,051,071 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1967:Or2o1
|
UTSW |
11 |
49,051,675 (GRCm39) |
missense |
probably benign |
0.06 |
|
R2472:Or2o1
|
UTSW |
11 |
49,051,198 (GRCm39) |
missense |
possibly damaging |
0.76 |
|
R3824:Or2o1
|
UTSW |
11 |
49,051,620 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
R4105:Or2o1
|
UTSW |
11 |
49,051,375 (GRCm39) |
missense |
possibly damaging |
0.51 |
|
R4255:Or2o1
|
UTSW |
11 |
49,051,262 (GRCm39) |
nonsense |
probably null |
|
|
R4716:Or2o1
|
UTSW |
11 |
49,051,717 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R6894:Or2o1
|
UTSW |
11 |
49,051,186 (GRCm39) |
missense |
probably benign |
0.06 |
|
R6999:Or2o1
|
UTSW |
11 |
49,051,239 (GRCm39) |
missense |
possibly damaging |
0.53 |
|
R8077:Or2o1
|
UTSW |
11 |
49,051,312 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8266:Or2o1
|
UTSW |
11 |
49,051,352 (GRCm39) |
nonsense |
probably null |
|
|
R8387:Or2o1
|
UTSW |
11 |
49,051,497 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8712:Or2o1
|
UTSW |
11 |
49,051,297 (GRCm39) |
missense |
probably benign |
0.39 |
|
R9160:Or2o1
|
UTSW |
11 |
49,051,261 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9542:Or2o1
|
UTSW |
11 |
49,051,073 (GRCm39) |
nonsense |
probably null |
|
|
Z1177:Or2o1
|
UTSW |
11 |
49,051,692 (GRCm39) |
frame shift |
probably null |
|
|
Z1177:Or2o1
|
UTSW |
11 |
49,051,125 (GRCm39) |
missense |
possibly damaging |
0.82 |
|
| Predicted Primers |
PCR Primer
(F):5'- AAGGCCTGCTCTTTCTTGGC -3'
(R):5'- AAGATGGAGGTGGCTCTATCCC -3'
Sequencing Primer
(F):5'- TCTTGGCCACGGCATCCTG -3'
(R):5'- CTCGCTGCATGTAGCTAAATATGGC -3'
|
| Posted On |
2016-10-24 |
Incidental Mutation