Mutagenetix > Incidental Mutation

Incidental Mutation 'R5568:Plcl1'

436977

Institutional Source

Beutler Lab

Gene Symbol

Plcl1

Ensembl Gene

ENSMUSG00000038349

Gene Name

phospholipase C-like 1

Synonyms

PRIP-1, C230017K02Rik, PLC-L

MMRRC Submission

043125-MU

Accession Numbers

Essential gene?

Probably essential (E-score: 0.848) question?

Stock #

R5568 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

55405921-55754285 bp(+) (GRCm38)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 55696150 bp (GRCm38)

Zygosity

Heterozygous

Amino Acid Change

Serine to Proline at position 217 (S217P)

Ref Sequence

ENSEMBL: ENSMUSP00000037854 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000042986]

AlphaFold

Q3USB7

Predicted Effect

possibly damaging
Transcript: ENSMUST00000042986
AA Change: S217P

PolyPhen 2 Score 0.819 (Sensitivity: 0.84; Specificity: 0.93)

SMART Domains

Protein: ENSMUSP00000037854
Gene: ENSMUSG00000038349
AA Change: S217P

Domain	Start	End	E-Value	Type
low complexity region	21	41	N/A	INTRINSIC
low complexity region	49	60	N/A	INTRINSIC
PH	115	226	6.98e-4	SMART
low complexity region	301	310	N/A	INTRINSIC
Pfam:EF-hand_like	316	398	5.9e-27	PFAM
PLCXc	399	543	2.13e-82	SMART
low complexity region	550	564	N/A	INTRINSIC
PLCYc	586	702	2.15e-69	SMART
C2	723	829	1.02e-21	SMART
low complexity region	1080	1092	N/A	INTRINSIC

Coding Region Coverage

1x: 99.9%
3x: 99.6%
10x: 98.3%
20x: 95.0%

Validation Efficiency

MGI Phenotype

PHENOTYPE: Homozygous null mutants display impaired motor coordination and decreased sensitivity to the sedative diazepam. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 96 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Aadacl4	T	C	4: 144,622,794	V207A	probably benign	Het
Abcc10	C	A	17: 46,303,908		probably null	Het
Abcc9	A	C	6: 142,689,016	V174G	possibly damaging	Het
Abl1	C	T	2: 31,779,074	A155V	probably damaging	Het
Aco2	T	A	15: 81,903,586	D212E	probably damaging	Het
Adam26b	A	T	8: 43,520,492	M491K	probably benign	Het
Anapc5	G	A	5: 122,791,925		probably benign	Het
Atf7	A	G	15: 102,563,322	I46T	probably damaging	Het
Cacna1b	A	G	2: 24,607,600	S2100P	probably damaging	Het
Capn5	T	A	7: 98,125,930	D501V	probably damaging	Het
Cc2d2a	A	G	5: 43,709,091	M748V	probably damaging	Het
Cd300c2	T	C	11: 115,000,836	T71A	probably damaging	Het
Chmp2a	T	C	7: 13,033,831	M56V	probably benign	Het
Cilp	A	C	9: 65,280,233	R1203S	probably benign	Het
Clp1	T	A	2: 84,725,978	K53*	probably null	Het
Crhbp	T	A	13: 95,442,229	D128V	probably damaging	Het
Crispld1	T	A	1: 17,750,271	I292N	probably benign	Het
Cyp2c68	A	T	19: 39,689,082	I488N	probably benign	Het
Cyp3a57	A	T	5: 145,370,646	M149L	probably benign	Het
Ddx24	T	A	12: 103,424,288	Q59L	possibly damaging	Het
Ddx27	A	G	2: 167,029,519	H512R	possibly damaging	Het
Ddx58	T	A	4: 40,222,140	M380L	probably benign	Het
Dlgap4	T	A	2: 156,762,901	*993K	probably null	Het
Dmxl2	A	T	9: 54,423,359		probably null	Het
Dus4l	A	T	12: 31,646,713	F88L	probably damaging	Het
Ep400	A	T	5: 110,756,205	V176E	probably damaging	Het
Fam71e1	T	G	7: 44,501,004	S207A	probably damaging	Het
Fat3	T	A	9: 16,376,923	K435*	probably null	Het
Fsip2	T	C	2: 82,986,564	C4214R	probably benign	Het
Gfral	T	C	9: 76,164,805	*394W	probably null	Het
Glis1	T	C	4: 107,619,635	S518P	probably damaging	Het
H2-T10	A	G	17: 36,119,187		probably null	Het
Hsbp1l1	T	C	18: 80,235,464	T35A	possibly damaging	Het
Ighv5-12	A	G	12: 113,702,217	F87S	probably damaging	Het
Ints13	A	C	6: 146,576,357	D31E	probably damaging	Het
Kbtbd12	C	T	6: 88,618,627	D74N	probably damaging	Het
Klrb1c	A	G	6: 128,788,914		probably benign	Het
Kmt5b	A	T	19: 3,786,538	H25L	probably benign	Het
Krt28	A	T	11: 99,371,384	M260K	probably damaging	Het
Krt79	A	G	15: 101,929,785	S512P	probably damaging	Het
Lama1	A	T	17: 67,768,298		probably null	Het
Maneal	T	C	4: 124,857,144	E273G	possibly damaging	Het
Map4k3	T	A	17: 80,663,998	Y80F	possibly damaging	Het
Mbd6	A	G	10: 127,283,428	V946A	possibly damaging	Het
Mfsd14b	A	T	13: 65,072,122		probably null	Het
Mrpl46	C	G	7: 78,780,494	W176S	probably damaging	Het
Muc19	A	G	15: 91,884,274		noncoding transcript	Het
Mup3	T	G	4: 62,084,572	E184A	possibly damaging	Het
Myo9a	A	G	9: 59,874,628	H1699R	probably benign	Het
Ndrg2	T	A	14: 51,906,963	T269S	probably damaging	Het
Nfatc1	A	T	18: 80,649,822	V688D	probably benign	Het
Ninj2	T	C	6: 120,198,709	I101T	probably benign	Het
Nlrp10	T	A	7: 108,924,261	M671L	probably benign	Het
Npsr1	T	A	9: 24,313,214	L296I	probably damaging	Het
Olfr582	G	T	7: 103,042,310	R272L	possibly damaging	Het
Olfr975	A	G	9: 39,950,687	L28P	probably benign	Het
Pacsin1	T	A	17: 27,708,048	D242E	probably damaging	Het
Pcdh1	T	C	18: 38,197,367	Y861C	probably damaging	Het
Pcdha12	T	C	18: 37,020,390	L54P	probably damaging	Het
Pcdhb18	T	A	18: 37,491,800	S728T	probably benign	Het
Phyhd1	T	A	2: 30,277,010	H108Q	probably damaging	Het
Plcb1	A	T	2: 135,370,593	I1035F	probably damaging	Het
Plppr2	G	A	9: 21,941,129	R103H	probably damaging	Het
Plxnb2	G	A	15: 89,157,435	T1722I	probably damaging	Het
Pole3	T	C	4: 62,524,431	N53S	probably damaging	Het
Ptk6	A	T	2: 181,199,695	N140K	possibly damaging	Het
Rab12	C	T	17: 66,497,423	R180H	probably damaging	Het
Rab36	G	T	10: 75,052,479	V252L	probably benign	Het
Ranbp3	T	C	17: 56,701,543		probably null	Het
Rapgef2	A	G	3: 79,104,001	L259P	probably damaging	Het
Scaf4	GGCTGCTGCTGCTGCTGCTGCTGCTG	GGCTGCTGCTGCTGCTGCTGCTG	16: 90,229,857		probably benign	Het
Scd2	T	C	19: 44,299,703	F178S	probably damaging	Het
Shmt2	A	G	10: 127,520,381	S87P	probably damaging	Het
Slf1	T	A	13: 77,046,704	D834V	probably damaging	Het
Sorcs2	A	C	5: 36,046,530	Y540*	probably null	Het
Srpk2	T	A	5: 23,525,699	Q274L	possibly damaging	Het
Stradb	T	A	1: 58,992,742	M271K	possibly damaging	Het
Tfec	T	A	6: 16,867,593	Q16L	possibly damaging	Het
Tfg	T	C	16: 56,701,087	T63A	probably benign	Het
Ticrr	G	A	7: 79,689,967		probably null	Het
Ticrr	T	A	7: 79,695,296	C1636*	probably null	Het
Tln2	A	G	9: 67,311,865	I266T	probably damaging	Het
Tmcc1	G	C	6: 116,022,110	R323G	possibly damaging	Het
Tnnt3	A	G	7: 142,512,040	E138G	probably damaging	Het
Tpm2	C	A	4: 43,522,692	E75*	probably null	Het
Ttn	T	G	2: 76,750,578	T23324P	probably damaging	Het
Ubr4	T	G	4: 139,392,038	L176R	probably damaging	Het
Uhrf2	G	T	19: 30,039,088	D46Y	probably damaging	Het
Ulbp1	A	C	10: 7,473,281	S21A	unknown	Het
Usp17lb	C	T	7: 104,841,208	G170R	probably damaging	Het
Utp15	T	C	13: 98,257,925	N153S	probably benign	Het
Vcan	T	A	13: 89,688,671	E2918V	probably damaging	Het
Vmn1r174	T	A	7: 23,754,494	I195K	probably damaging	Het
Vmn1r76	C	T	7: 11,931,135	V16I	probably benign	Het
Xdh	T	C	17: 73,943,885	D24G	possibly damaging	Het
Xylb	T	A	9: 119,361,132	H68Q	probably benign	Het

Other mutations in Plcl1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00233:Plcl1	APN	1	55406536	missense	probably benign
IGL00491:Plcl1	APN	1	55713498	critical splice donor site	probably null
IGL00753:Plcl1	APN	1	55696738	missense	probably damaging	1.00
IGL01415:Plcl1	APN	1	55696396	missense	possibly damaging	0.92
IGL03024:Plcl1	APN	1	55695787	missense	probably damaging	1.00
K3955:Plcl1	UTSW	1	55697939	missense	possibly damaging	0.78
PIT4791001:Plcl1	UTSW	1	55701931	missense	probably benign	0.03
R0066:Plcl1	UTSW	1	55713475	missense	probably damaging	0.99
R0066:Plcl1	UTSW	1	55713475	missense	probably damaging	0.99
R0083:Plcl1	UTSW	1	55697939	missense	possibly damaging	0.78
R0086:Plcl1	UTSW	1	55715583	missense	probably damaging	1.00
R0092:Plcl1	UTSW	1	55696765	missense	probably damaging	0.98
R0108:Plcl1	UTSW	1	55697939	missense	possibly damaging	0.78
R1716:Plcl1	UTSW	1	55695838	missense	probably damaging	0.99
R2061:Plcl1	UTSW	1	55751345	missense	probably benign	0.01
R2128:Plcl1	UTSW	1	55697838	missense	probably damaging	1.00
R2869:Plcl1	UTSW	1	55697150	missense	probably benign	0.09
R2869:Plcl1	UTSW	1	55697150	missense	probably benign	0.09
R2870:Plcl1	UTSW	1	55697150	missense	probably benign	0.09
R2870:Plcl1	UTSW	1	55697150	missense	probably benign	0.09
R2872:Plcl1	UTSW	1	55697150	missense	probably benign	0.09
R2872:Plcl1	UTSW	1	55697150	missense	probably benign	0.09
R2873:Plcl1	UTSW	1	55697150	missense	probably benign	0.09
R3819:Plcl1	UTSW	1	55696599	missense	probably benign
R3974:Plcl1	UTSW	1	55698215	missense	probably benign	0.30
R3975:Plcl1	UTSW	1	55698215	missense	probably benign	0.30
R4214:Plcl1	UTSW	1	55751335	nonsense	probably null
R4400:Plcl1	UTSW	1	55715577	missense	probably damaging	1.00
R4452:Plcl1	UTSW	1	55696886	missense	probably benign	0.00
R4615:Plcl1	UTSW	1	55698134	missense	probably benign	0.00
R5060:Plcl1	UTSW	1	55696512	missense	possibly damaging	0.84
R5422:Plcl1	UTSW	1	55697384	missense	probably benign	0.00
R5781:Plcl1	UTSW	1	55695989	missense	possibly damaging	0.92
R5809:Plcl1	UTSW	1	55696001	missense	probably damaging	1.00
R6009:Plcl1	UTSW	1	55696246	missense	probably damaging	1.00
R6339:Plcl1	UTSW	1	55696315	missense	probably damaging	1.00
R6431:Plcl1	UTSW	1	55697252	missense	probably benign	0.03
R6534:Plcl1	UTSW	1	55696748	missense	probably damaging	1.00
R6565:Plcl1	UTSW	1	55697958	nonsense	probably null
R6678:Plcl1	UTSW	1	55695776	missense	probably benign	0.13
R6773:Plcl1	UTSW	1	55751302	missense	probably benign	0.03
R6925:Plcl1	UTSW	1	55406598	nonsense	probably null
R7168:Plcl1	UTSW	1	55697463	missense	probably damaging	1.00
R7256:Plcl1	UTSW	1	55698218	missense	probably benign	0.45
R7522:Plcl1	UTSW	1	55696364	missense	probably benign	0.31
R7527:Plcl1	UTSW	1	55697114	missense	probably damaging	1.00
R7536:Plcl1	UTSW	1	55713481	nonsense	probably null
R7585:Plcl1	UTSW	1	55406449	missense	probably benign	0.00
R7591:Plcl1	UTSW	1	55697449	missense	probably benign	0.01
R7689:Plcl1	UTSW	1	55697468	missense	probably damaging	1.00
R7960:Plcl1	UTSW	1	55697284	missense	possibly damaging	0.48
R8029:Plcl1	UTSW	1	55696078	missense	probably benign	0.26
R8241:Plcl1	UTSW	1	55695817	missense	probably benign	0.01
R8323:Plcl1	UTSW	1	55697736	missense	possibly damaging	0.58
R9000:Plcl1	UTSW	1	55697831	missense	probably damaging	1.00
R9331:Plcl1	UTSW	1	55696871	missense	possibly damaging	0.95
R9358:Plcl1	UTSW	1	55696651	missense	probably damaging	1.00
R9432:Plcl1	UTSW	1	55406428	missense	probably benign
R9452:Plcl1	UTSW	1	55695833	missense	probably damaging	1.00
R9652:Plcl1	UTSW	1	55696291	missense	probably benign	0.00
R9802:Plcl1	UTSW	1	55696082	missense	probably damaging	0.98
Z1176:Plcl1	UTSW	1	55696040	missense	probably benign	0.20
Z1176:Plcl1	UTSW	1	55751284	nonsense	probably null
Z1177:Plcl1	UTSW	1	55696884	missense	possibly damaging	0.72

Predicted Primers

PCR Primer
(F):5'- GGACATTTCTGCCATCAAAGAG -3'
(R):5'- TCTGTCACCCGGGTAGTTAG -3'

Sequencing Primer
(F):5'- TTTCTGCCATCAAAGAGATCAGGC -3'
(R):5'- CCTGATCTTAGATTCCTTCAGAGTAG -3'

Posted On

2016-10-24