Incidental Mutation 'R5587:Srbd1'
ID 438850
Institutional Source Beutler Lab
Gene Symbol Srbd1
Ensembl Gene ENSMUSG00000024135
Gene Name S1 RNA binding domain 1
Synonyms D530025C17Rik
MMRRC Submission 043141-MU
Accession Numbers
Essential gene? Probably essential (E-score: 0.961) question?
Stock # R5587 (G1)
Quality Score 225
Status Validated
Chromosome 17
Chromosomal Location 86292093-86452603 bp(-) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) T to A at 86435229 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Glutamine to Leucine at position 278 (Q278L)
Ref Sequence ENSEMBL: ENSMUSP00000092810 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000095187]
AlphaFold no structure available at present
Predicted Effect probably damaging
Transcript: ENSMUST00000095187
AA Change: Q278L

PolyPhen 2 Score 0.990 (Sensitivity: 0.72; Specificity: 0.97)
SMART Domains Protein: ENSMUSP00000092810
Gene: ENSMUSG00000024135
AA Change: Q278L

DomainStartEndE-ValueType
low complexity region 20 33 N/A INTRINSIC
low complexity region 104 128 N/A INTRINSIC
Pfam:Tex_N 213 403 2.8e-43 PFAM
YqgFc 532 631 4.1e-32 SMART
Pfam:HHH_7 668 764 1.6e-6 PFAM
Pfam:HHH_3 698 762 4.2e-25 PFAM
S1 903 978 7e-15 SMART
Meta Mutation Damage Score 0.2890 question?
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.7%
  • 10x: 98.5%
  • 20x: 95.9%
Validation Efficiency 96% (78/81)
Allele List at MGI
Other mutations in this stock
Total: 79 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1110002E22Rik A G 3: 137,771,170 (GRCm39) R120G probably benign Het
Acad11 A G 9: 103,940,966 (GRCm39) T3A probably benign Het
Adamts18 G A 8: 114,501,992 (GRCm39) Q290* probably null Het
Ahnak A G 19: 8,986,840 (GRCm39) D2708G possibly damaging Het
Asxl3 T A 18: 22,658,304 (GRCm39) C2105S probably benign Het
Atp8b1 A T 18: 64,672,281 (GRCm39) F1028I probably damaging Het
Axdnd1 C G 1: 156,178,982 (GRCm39) W615C probably damaging Het
Bcl3 A T 7: 19,543,559 (GRCm39) Y10* probably null Het
Bmp2 T A 2: 133,396,566 (GRCm39) V74E possibly damaging Het
Ccdc121 G T 5: 31,643,428 (GRCm39) G53W probably benign Het
Ccdc78 C A 17: 26,005,651 (GRCm39) P21Q probably benign Het
Cluap1 T A 16: 3,733,348 (GRCm39) V199E probably damaging Het
Cntnap3 T C 13: 64,894,552 (GRCm39) E1120G probably damaging Het
Col1a2 T A 6: 4,540,531 (GRCm39) W1330R unknown Het
Coq4 A G 2: 29,685,526 (GRCm39) probably null Het
Cwf19l1 G A 19: 44,109,316 (GRCm39) T346I possibly damaging Het
Cyct T C 2: 76,184,547 (GRCm39) Y68C probably damaging Het
Dnah10 T C 5: 124,870,977 (GRCm39) L2368P probably benign Het
Dnah2 A T 11: 69,328,068 (GRCm39) F3346I probably damaging Het
Dpp3 A T 19: 4,968,295 (GRCm39) V259E probably damaging Het
Dpyd A C 3: 118,858,600 (GRCm39) S605R probably damaging Het
Emc1 A G 4: 139,089,459 (GRCm39) E209G probably damaging Het
Esrra A G 19: 6,897,575 (GRCm39) S61P probably benign Het
Garin2 C A 12: 78,761,849 (GRCm39) P171H probably damaging Het
Gbx2 T A 1: 89,860,844 (GRCm39) probably benign Het
Hepacam A G 9: 37,295,980 (GRCm39) H377R probably damaging Het
Igkv12-46 T C 6: 69,741,534 (GRCm39) Y107C probably damaging Het
Intu A G 3: 40,629,738 (GRCm39) D356G probably damaging Het
Izumo4 A T 10: 80,539,054 (GRCm39) N113Y probably damaging Het
Krt86 G A 15: 101,371,474 (GRCm39) A15T probably benign Het
Lhx8 A T 3: 154,017,316 (GRCm39) S275R probably damaging Het
Lingo3 A T 10: 80,671,364 (GRCm39) S189T probably damaging Het
Llgl1 T A 11: 60,601,168 (GRCm39) M702K probably benign Het
Lpin1 T C 12: 16,623,715 (GRCm39) Y223C Het
Lrit3 G T 3: 129,582,547 (GRCm39) A359E probably benign Het
Lrp2 T C 2: 69,329,607 (GRCm39) E1720G probably benign Het
Mcub A C 3: 129,710,619 (GRCm39) V271G probably benign Het
Nktr C T 9: 121,577,555 (GRCm39) probably benign Het
Or10g9 A T 9: 39,911,917 (GRCm39) I202N possibly damaging Het
Or13p4 T A 4: 118,547,067 (GRCm39) D194V probably damaging Het
Or1j18 A T 2: 36,624,633 (GRCm39) Q100L probably damaging Het
Or4d5 A T 9: 40,012,540 (GRCm39) L82Q probably damaging Het
Or52z12 T A 7: 103,233,738 (GRCm39) Y170N probably benign Het
Or9i1 G A 19: 13,839,940 (GRCm39) R261H probably damaging Het
Pcdha4 T C 18: 37,087,875 (GRCm39) V686A probably benign Het
Pelo A G 13: 115,226,409 (GRCm39) V16A possibly damaging Het
Plcd1 A G 9: 118,902,900 (GRCm39) S539P probably benign Het
Prss1 A G 6: 41,440,199 (GRCm39) I179V possibly damaging Het
Ptgs2 T C 1: 149,981,306 (GRCm39) Y530H probably damaging Het
Rai1 T C 11: 60,080,685 (GRCm39) V1583A probably damaging Het
Raph1 T G 1: 60,537,632 (GRCm39) D508A probably damaging Het
Rmnd5a A G 6: 71,371,603 (GRCm39) probably benign Het
Rsf1 T C 7: 97,311,328 (GRCm39) L686P probably benign Het
Samd9l T C 6: 3,373,291 (GRCm39) I1323M possibly damaging Het
Scn1a T C 2: 66,103,425 (GRCm39) N1934S probably benign Het
Sec23ip C T 7: 128,352,151 (GRCm39) H176Y probably benign Het
Sh3glb2 A G 2: 30,244,863 (GRCm39) probably null Het
Sis A G 3: 72,821,909 (GRCm39) I1384T possibly damaging Het
Spata31d1a A C 13: 59,850,432 (GRCm39) C565W probably damaging Het
Sry T C Y: 2,662,625 (GRCm39) H345R unknown Het
Suox A T 10: 128,507,694 (GRCm39) D111E probably damaging Het
Taar7a A T 10: 23,868,726 (GRCm39) F218L probably benign Het
Tfcp2l1 C A 1: 118,592,492 (GRCm39) N288K possibly damaging Het
Tmem128 G T 5: 38,417,765 (GRCm39) R7L possibly damaging Het
Tmem266 A G 9: 55,344,850 (GRCm39) N494S probably damaging Het
Tmprss3 T A 17: 31,412,966 (GRCm39) H80L probably benign Het
Tnrc6c C T 11: 117,640,097 (GRCm39) Q1211* probably null Het
Tns1 T A 1: 73,959,755 (GRCm39) D1671V possibly damaging Het
Trmt1l T A 1: 151,311,455 (GRCm39) probably benign Het
Tshz2 A T 2: 169,726,262 (GRCm39) D286V probably damaging Het
Ttyh2 A G 11: 114,566,485 (GRCm39) E39G probably benign Het
Vmn2r125 G A 4: 156,702,433 (GRCm39) C73Y probably damaging Het
Vmn2r5 T C 3: 64,411,497 (GRCm39) D357G probably damaging Het
Vmn2r61 T C 7: 41,949,911 (GRCm39) F777S probably damaging Het
Vmn2r9 T C 5: 108,995,427 (GRCm39) E407G probably damaging Het
Vwa3a A G 7: 120,379,458 (GRCm39) N521S probably damaging Het
Zan C G 5: 137,390,024 (GRCm39) S4816T unknown Het
Zc3h7b T C 15: 81,656,059 (GRCm39) Y136H possibly damaging Het
Zfp101 T C 17: 33,600,295 (GRCm39) K487R possibly damaging Het
Other mutations in Srbd1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00963:Srbd1 APN 17 86,422,637 (GRCm39) missense probably damaging 1.00
IGL00988:Srbd1 APN 17 86,437,698 (GRCm39) missense probably damaging 0.96
IGL01111:Srbd1 APN 17 86,405,961 (GRCm39) missense probably benign 0.15
IGL02186:Srbd1 APN 17 86,416,659 (GRCm39) missense probably benign
IGL02233:Srbd1 APN 17 86,406,050 (GRCm39) splice site probably null
IGL02307:Srbd1 APN 17 86,433,616 (GRCm39) missense probably damaging 1.00
IGL02392:Srbd1 APN 17 86,295,801 (GRCm39) missense probably benign 0.34
IGL02831:Srbd1 APN 17 86,311,299 (GRCm39) missense probably damaging 1.00
IGL03299:Srbd1 APN 17 86,428,087 (GRCm39) missense possibly damaging 0.95
PIT4494001:Srbd1 UTSW 17 86,449,787 (GRCm39) critical splice donor site probably null
PIT4677001:Srbd1 UTSW 17 86,422,640 (GRCm39) nonsense probably null
R0233:Srbd1 UTSW 17 86,365,173 (GRCm39) missense probably damaging 1.00
R0233:Srbd1 UTSW 17 86,365,173 (GRCm39) missense probably damaging 1.00
R0464:Srbd1 UTSW 17 86,427,430 (GRCm39) missense probably damaging 1.00
R0692:Srbd1 UTSW 17 86,443,888 (GRCm39) missense probably benign 0.25
R0771:Srbd1 UTSW 17 86,437,682 (GRCm39) missense probably benign 0.09
R1074:Srbd1 UTSW 17 86,311,380 (GRCm39) missense probably damaging 1.00
R1173:Srbd1 UTSW 17 86,405,940 (GRCm39) missense probably null 1.00
R1446:Srbd1 UTSW 17 86,446,580 (GRCm39) missense probably benign 0.44
R1587:Srbd1 UTSW 17 86,292,865 (GRCm39) missense probably damaging 1.00
R1780:Srbd1 UTSW 17 86,365,113 (GRCm39) missense probably damaging 1.00
R1865:Srbd1 UTSW 17 86,422,732 (GRCm39) splice site probably benign
R1933:Srbd1 UTSW 17 86,410,321 (GRCm39) missense probably damaging 1.00
R1934:Srbd1 UTSW 17 86,410,321 (GRCm39) missense probably damaging 1.00
R2002:Srbd1 UTSW 17 86,449,828 (GRCm39) missense probably benign
R2228:Srbd1 UTSW 17 86,292,651 (GRCm39) missense probably damaging 1.00
R3160:Srbd1 UTSW 17 86,437,643 (GRCm39) missense probably benign 0.03
R3162:Srbd1 UTSW 17 86,437,643 (GRCm39) missense probably benign 0.03
R3162:Srbd1 UTSW 17 86,437,643 (GRCm39) missense probably benign 0.03
R3439:Srbd1 UTSW 17 86,365,187 (GRCm39) missense probably benign 0.01
R3611:Srbd1 UTSW 17 86,410,355 (GRCm39) missense probably benign 0.03
R4255:Srbd1 UTSW 17 86,410,350 (GRCm39) missense possibly damaging 0.80
R4300:Srbd1 UTSW 17 86,292,632 (GRCm39) missense probably damaging 0.98
R4319:Srbd1 UTSW 17 86,358,578 (GRCm39) missense probably damaging 1.00
R4619:Srbd1 UTSW 17 86,416,693 (GRCm39) missense probably benign 0.30
R4620:Srbd1 UTSW 17 86,416,693 (GRCm39) missense probably benign 0.30
R4629:Srbd1 UTSW 17 86,428,100 (GRCm39) missense probably damaging 0.99
R5379:Srbd1 UTSW 17 86,308,964 (GRCm39) missense possibly damaging 0.88
R5469:Srbd1 UTSW 17 86,427,370 (GRCm39) missense possibly damaging 0.77
R5726:Srbd1 UTSW 17 86,428,157 (GRCm39) missense possibly damaging 0.89
R6166:Srbd1 UTSW 17 86,406,696 (GRCm39) missense probably damaging 1.00
R6237:Srbd1 UTSW 17 86,292,723 (GRCm39) missense probably damaging 0.99
R6696:Srbd1 UTSW 17 86,446,619 (GRCm39) missense possibly damaging 0.46
R6971:Srbd1 UTSW 17 86,406,718 (GRCm39) missense possibly damaging 0.79
R6986:Srbd1 UTSW 17 86,292,650 (GRCm39) missense probably damaging 1.00
R7018:Srbd1 UTSW 17 86,443,843 (GRCm39) missense possibly damaging 0.93
R7082:Srbd1 UTSW 17 86,365,160 (GRCm39) missense probably damaging 1.00
R7209:Srbd1 UTSW 17 86,308,948 (GRCm39) missense probably damaging 1.00
R7340:Srbd1 UTSW 17 86,443,782 (GRCm39) missense probably benign 0.02
R7417:Srbd1 UTSW 17 86,443,749 (GRCm39) missense probably benign
R7467:Srbd1 UTSW 17 86,406,702 (GRCm39) missense probably damaging 0.96
R7833:Srbd1 UTSW 17 86,292,882 (GRCm39) missense possibly damaging 0.63
R8720:Srbd1 UTSW 17 86,358,571 (GRCm39) missense probably damaging 1.00
R8839:Srbd1 UTSW 17 86,295,849 (GRCm39) missense probably benign
R8899:Srbd1 UTSW 17 86,292,885 (GRCm39) missense
R8905:Srbd1 UTSW 17 86,308,890 (GRCm39) missense probably benign 0.00
R9051:Srbd1 UTSW 17 86,428,115 (GRCm39) missense possibly damaging 0.70
R9402:Srbd1 UTSW 17 86,406,705 (GRCm39) missense probably benign 0.26
R9701:Srbd1 UTSW 17 86,433,559 (GRCm39) missense probably damaging 1.00
R9729:Srbd1 UTSW 17 86,437,550 (GRCm39) missense probably benign
R9733:Srbd1 UTSW 17 86,422,711 (GRCm39) missense probably damaging 0.99
Predicted Primers PCR Primer
(F):5'- AACAGTGGCTAGTGGCTTAG -3'
(R):5'- ATCCACAGAGGTTGTTGCCAG -3'

Sequencing Primer
(F):5'- AGTGGCTTAGCTTTTTCCATCTTAG -3'
(R):5'- CAGCGTTAACTACTTGATCCTGATGG -3'
Posted On 2016-10-26