Mutagenetix > Incidental Mutation

Incidental Mutation 'R5608:Qrfpr'

439375

Institutional Source

Beutler Lab

Gene Symbol

Qrfpr

Ensembl Gene

ENSMUSG00000058400

Gene Name

pyroglutamylated RFamide peptide receptor

Synonyms

AQ27, Gpr103

MMRRC Submission

043272-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R5608 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

36233575-36276462 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 36235114 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Valine to Alanine at position 292 (V292A)

Ref Sequence

ENSEMBL: ENSMUSP00000088768 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000091227] [ENSMUST00000197447]

AlphaFold

P83861

Predicted Effect

possibly damaging
Transcript: ENSMUST00000091227
AA Change: V292A

PolyPhen 2 Score 0.552 (Sensitivity: 0.88; Specificity: 0.91)

SMART Domains

Protein: ENSMUSP00000088768
Gene: ENSMUSG00000058400
AA Change: V292A

Domain	Start	End	E-Value	Type
Pfam:7TM_GPCR_Srsx	56	347	3.6e-8	PFAM
Pfam:7tm_1	62	332	4.5e-57	PFAM

Predicted Effect

silent
Transcript: ENSMUST00000197447

SMART Domains

Protein: ENSMUSP00000143773
Gene: ENSMUSG00000058400

Domain	Start	End	E-Value	Type
low complexity region	40	61	N/A	INTRINSIC
Pfam:7tm_1	62	229	1.1e-35	PFAM

Meta Mutation Damage Score

0.4846

Coding Region Coverage

1x: 99.9%
3x: 99.6%
10x: 98.2%
20x: 94.9%

Validation Efficiency

95% (54/57)

MGI Phenotype

PHENOTYPE: Mice homozygous for a mutation diisplay kyphosis with abnormal vertebrae morphology and development including osteopenia of the vertebrae. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 48 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adamtsl5	T	C	10: 80,178,781 (GRCm39)	D199G	probably benign	Het
Adgrl1	G	T	8: 84,663,886 (GRCm39)	G1118W	probably damaging	Het
Adgrv1	T	C	13: 81,303,395 (GRCm39)	E117G	probably damaging	Het
Alkbh7	A	T	17: 57,305,446 (GRCm39)	I88F	probably damaging	Het
Ankrd26	C	A	6: 118,488,583 (GRCm39)	D1359Y	probably damaging	Het
Apoo-ps	T	C	13: 107,550,709 (GRCm39)		noncoding transcript	Het
Arfgap2	G	A	2: 91,100,547 (GRCm39)	R298H	probably damaging	Het
Birc6	G	A	17: 74,920,539 (GRCm39)	V2109I	probably damaging	Het
Blvrb	C	T	7: 27,158,894 (GRCm39)	P98L	probably benign	Het
Bmpr1b	C	A	3: 141,563,283 (GRCm39)	M220I	possibly damaging	Het
Bpifa1	T	C	2: 153,989,495 (GRCm39)		probably benign	Het
Capn7	A	G	14: 31,092,664 (GRCm39)	Y737C	probably damaging	Het
Cdh13	A	T	8: 119,484,213 (GRCm39)	D158V	probably benign	Het
Cenpe	C	A	3: 134,940,837 (GRCm39)	S662*	probably null	Het
Colec12	T	A	18: 9,848,267 (GRCm39)	D148E	possibly damaging	Het
Dennd5a	C	A	7: 109,518,630 (GRCm39)	E480*	probably null	Het
Dpysl4	T	C	7: 138,678,459 (GRCm39)	V473A	probably damaging	Het
Dyrk3	T	C	1: 131,056,452 (GRCm39)	S574G	probably benign	Het
Fchsd1	C	T	18: 38,092,926 (GRCm39)		probably benign	Het
H2-Aa	T	C	17: 34,502,816 (GRCm39)	T117A	possibly damaging	Het
Helq	C	T	5: 100,938,085 (GRCm39)	G454S	probably damaging	Het
Incenp	CGCTGCTGCTGC	CGCTGCTGCTGCTGC	19: 9,871,232 (GRCm39)		probably benign	Het
Ktn1	TTGTTGTCTTTGTGTT	TTGTT	14: 47,971,554 (GRCm39)		probably benign	Het
Lig1	C	A	7: 13,039,933 (GRCm39)	T715N	probably damaging	Het
Lrrc31	C	A	3: 30,743,994 (GRCm39)		probably null	Het
Ltbp2	A	C	12: 84,834,238 (GRCm39)		probably null	Het
Marcks	A	T	10: 37,012,912 (GRCm39)	V41E	probably damaging	Het
Mex3c	T	A	18: 73,723,014 (GRCm39)	M369K	possibly damaging	Het
Msh6	A	G	17: 88,294,329 (GRCm39)	D1028G	probably damaging	Het
Nhlrc3	C	T	3: 53,369,732 (GRCm39)		probably null	Het
Or1n1b	A	G	2: 36,780,527 (GRCm39)	F111S	probably damaging	Het
Or52s1b	T	C	7: 102,822,056 (GRCm39)	T263A	probably damaging	Het
Or52z12	G	A	7: 103,233,506 (GRCm39)	W92*	probably null	Het
Or8b8	G	A	9: 37,809,078 (GRCm39)	C126Y	probably damaging	Het
Pcdhga6	A	G	18: 37,840,514 (GRCm39)	N78S	possibly damaging	Het
Plag1	T	A	4: 3,905,463 (GRCm39)	K76*	probably null	Het
Ptpn21	T	A	12: 98,655,036 (GRCm39)	T644S	probably benign	Het
Rbbp6	T	A	7: 122,596,309 (GRCm39)	V617E	probably damaging	Het
Rnf157	A	T	11: 116,287,146 (GRCm39)		probably null	Het
Serpina5	A	C	12: 104,070,003 (GRCm39)	Y300S	probably damaging	Het
Slc41a3	A	G	6: 90,617,889 (GRCm39)	K279R	probably benign	Het
Smndc1	A	G	19: 53,372,084 (GRCm39)	V110A	probably benign	Het
Spata31e2	T	C	1: 26,722,129 (GRCm39)	Q1017R	probably damaging	Het
Tubgcp6	A	G	15: 88,995,353 (GRCm39)	V419A	probably benign	Het
Uggt2	C	T	14: 119,326,611 (GRCm39)	G200D	possibly damaging	Het
Utrn	A	T	10: 12,547,581 (GRCm39)	S1620T	probably benign	Het
Xkr4	T	C	1: 3,741,603 (GRCm39)		probably benign	Het
Zscan22	G	A	7: 12,640,919 (GRCm39)	G388S	probably damaging	Het

Other mutations in Qrfpr

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01935:Qrfpr	APN	3	36,235,200 (GRCm39)	splice site	probably null
IGL02274:Qrfpr	APN	3	36,276,285 (GRCm39)	missense	probably damaging	0.98
R0382:Qrfpr	UTSW	3	36,235,118 (GRCm39)	missense	possibly damaging	0.73
R0398:Qrfpr	UTSW	3	36,235,201 (GRCm39)	splice site	probably benign
R0631:Qrfpr	UTSW	3	36,276,138 (GRCm39)	missense	probably damaging	1.00
R0690:Qrfpr	UTSW	3	36,243,708 (GRCm39)	missense	probably damaging	1.00
R1222:Qrfpr	UTSW	3	36,234,244 (GRCm39)	missense	probably damaging	1.00
R1413:Qrfpr	UTSW	3	36,236,809 (GRCm39)	missense	possibly damaging	0.92
R1418:Qrfpr	UTSW	3	36,234,244 (GRCm39)	missense	probably damaging	1.00
R1500:Qrfpr	UTSW	3	36,236,729 (GRCm39)	missense	probably damaging	1.00
R2037:Qrfpr	UTSW	3	36,236,806 (GRCm39)	missense	probably damaging	0.99
R3924:Qrfpr	UTSW	3	36,276,072 (GRCm39)	missense	possibly damaging	0.71
R3925:Qrfpr	UTSW	3	36,276,072 (GRCm39)	missense	possibly damaging	0.71
R3966:Qrfpr	UTSW	3	36,235,149 (GRCm39)	missense	possibly damaging	0.73
R4298:Qrfpr	UTSW	3	36,243,703 (GRCm39)	missense	probably damaging	1.00
R4751:Qrfpr	UTSW	3	36,236,771 (GRCm39)	missense	possibly damaging	0.67
R4760:Qrfpr	UTSW	3	36,276,073 (GRCm39)	missense	probably benign	0.34
R4989:Qrfpr	UTSW	3	36,276,285 (GRCm39)	missense	probably damaging	0.98
R5548:Qrfpr	UTSW	3	36,276,075 (GRCm39)	missense	possibly damaging	0.84
R5607:Qrfpr	UTSW	3	36,235,114 (GRCm39)	missense	possibly damaging	0.55
R6027:Qrfpr	UTSW	3	36,276,187 (GRCm39)	missense	probably benign	0.44
R6115:Qrfpr	UTSW	3	36,236,742 (GRCm39)	missense	possibly damaging	0.51
R6546:Qrfpr	UTSW	3	36,234,414 (GRCm39)	missense	probably damaging	1.00
R6714:Qrfpr	UTSW	3	36,234,405 (GRCm39)	missense	possibly damaging	0.81
R7080:Qrfpr	UTSW	3	36,234,198 (GRCm39)	missense	probably benign	0.04
R7833:Qrfpr	UTSW	3	36,243,751 (GRCm39)	missense	probably benign
R8796:Qrfpr	UTSW	3	36,234,345 (GRCm39)	missense	probably damaging	1.00
R9032:Qrfpr	UTSW	3	36,276,099 (GRCm39)	missense	probably damaging	1.00
R9085:Qrfpr	UTSW	3	36,276,099 (GRCm39)	missense	probably damaging	1.00
R9121:Qrfpr	UTSW	3	36,235,156 (GRCm39)	missense	probably damaging	1.00
R9522:Qrfpr	UTSW	3	36,236,676 (GRCm39)	missense	probably damaging	1.00
Z1176:Qrfpr	UTSW	3	36,236,759 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- ATCACACAGAAGGTTGGCG -3'
(R):5'- ACAGGTCACAAGCATGCTTATTG -3'

Sequencing Primer
(F):5'- ACAGAAGGTTGGCGCTCCTG -3'
(R):5'- CTAGAAAAGGCGATGCTACTATGTTG -3'

Posted On

2016-10-26