Mutagenetix > Incidental Mutation

Incidental Mutation 'R5617:Tubal3'

439595

Institutional Source

Beutler Lab

Gene Symbol

Tubal3

Ensembl Gene

ENSMUSG00000021216

Gene Name

tubulin, alpha-like 3

Synonyms

MMRRC Submission

043276-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.218) question?

Stock #

R5617 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

3974695-3985277 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to A at 3983432 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Leucine to Histidine at position 404 (L404H)

Ref Sequence

ENSEMBL: ENSMUSP00000021639 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000021639]

AlphaFold

Q3UX10

Predicted Effect

probably damaging
Transcript: ENSMUST00000021639
AA Change: L404H

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000021639
Gene: ENSMUSG00000021216
AA Change: L404H

Domain	Start	End	E-Value	Type
Tubulin	56	253	9.39e-66	SMART
Tubulin_C	255	400	8.93e-49	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000223035

Meta Mutation Damage Score

0.7686

Coding Region Coverage

1x: 99.4%
3x: 98.7%
10x: 97.4%
20x: 95.6%

Validation Efficiency

100% (59/59)

Allele List at MGI

Other mutations in this stock

Total: 54 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca13	C	T	11: 9,227,891 (GRCm39)	L645F	probably benign	Het
Acss3	T	C	10: 106,787,851 (GRCm39)	Y522C	probably damaging	Het
Asb18	A	G	1: 89,882,184 (GRCm39)	V118A	possibly damaging	Het
Aste1	T	A	9: 105,275,034 (GRCm39)	C8S	probably benign	Het
Atp10a	A	G	7: 58,453,423 (GRCm39)	S834G	probably benign	Het
Cdh18	A	G	15: 23,226,854 (GRCm39)	D105G	probably damaging	Het
Cenpb	T	C	2: 131,020,934 (GRCm39)	E288G	probably damaging	Het
Clcnka	C	T	4: 141,116,628 (GRCm39)	G541D	probably null	Het
Dctn3	T	C	4: 41,716,407 (GRCm39)	I134V	possibly damaging	Het
Dennd4b	T	C	3: 90,182,933 (GRCm39)	S917P	probably benign	Het
Fam135b	A	T	15: 71,493,865 (GRCm39)	D21E	probably damaging	Het
Fam174a	T	C	1: 95,241,972 (GRCm39)	V144A	probably damaging	Het
Fbxo38	A	G	18: 62,639,042 (GRCm39)	Y1087H	probably damaging	Het
Gm7275	A	T	16: 47,894,527 (GRCm39)		noncoding transcript	Het
Gm9271	G	T	7: 39,013,076 (GRCm39)		noncoding transcript	Het
Grm2	T	C	9: 106,528,275 (GRCm39)		probably null	Het
Htt	T	A	5: 35,028,150 (GRCm39)	V1802D	possibly damaging	Het
Ighv1-75	C	A	12: 115,797,874 (GRCm39)	G16V	probably benign	Het
Krt78	G	A	15: 101,856,044 (GRCm39)	T589I	probably damaging	Het
Lama3	T	C	18: 12,631,993 (GRCm39)		probably benign	Het
Lbr	A	T	1: 181,656,467 (GRCm39)	V227D	probably benign	Het
Lsamp	T	C	16: 41,954,786 (GRCm39)	V211A	probably damaging	Het
Map3k19	G	A	1: 127,750,703 (GRCm39)	R883C	probably damaging	Het
Marchf8	A	C	6: 116,380,481 (GRCm39)	I111L	possibly damaging	Het
Mrps10	T	A	17: 47,689,167 (GRCm39)	M187K	probably benign	Het
Ncdn	G	A	4: 126,638,840 (GRCm39)	R660C	probably damaging	Het
Notum	A	T	11: 120,547,171 (GRCm39)	Y332*	probably null	Het
Nr1h5	A	T	3: 102,855,145 (GRCm39)	L319I	probably damaging	Het
Or51q1	A	T	7: 103,628,921 (GRCm39)	H180L	possibly damaging	Het
Or8k35	T	A	2: 86,424,345 (GRCm39)	I276L	probably benign	Het
Osbpl5	T	C	7: 143,246,684 (GRCm39)	D765G	possibly damaging	Het
Parp3	C	T	9: 106,351,704 (GRCm39)	V170M	possibly damaging	Het
Pcdh15	A	G	10: 74,471,504 (GRCm39)		probably benign	Het
Pcdha9	T	G	18: 37,131,869 (GRCm39)	S313A	probably benign	Het
Pfkm	A	G	15: 98,020,107 (GRCm39)	R201G	possibly damaging	Het
Pgm5	G	A	19: 24,727,765 (GRCm39)	R375*	probably null	Het
Phactr2	A	G	10: 13,349,809 (GRCm39)	S72P	possibly damaging	Het
Plaat1	A	T	16: 29,039,162 (GRCm39)	R81*	probably null	Het
Plec	A	G	15: 76,058,732 (GRCm39)	L3600P	probably damaging	Het
Pou6f1	G	A	15: 100,483,874 (GRCm39)	T208M	possibly damaging	Het
Rabep1	C	T	11: 70,808,355 (GRCm39)	S394L	probably damaging	Het
Ranbp2	T	G	10: 58,301,489 (GRCm39)	F687C	probably damaging	Het
Ranbp6	A	G	19: 29,789,863 (GRCm39)	F163S	probably damaging	Het
Rcor3	T	C	1: 191,804,430 (GRCm39)	N240D	probably benign	Het
Samd13	C	A	3: 146,352,065 (GRCm39)	K95N	probably benign	Het
Slc25a17	G	T	15: 81,244,975 (GRCm39)		probably benign	Het
Slfn8	G	T	11: 82,895,547 (GRCm39)	H420N	probably benign	Het
Sptbn5	G	A	2: 119,876,965 (GRCm39)		probably benign	Het
Stim2	G	A	5: 54,267,075 (GRCm39)	E21K	probably damaging	Het
Tmem163	A	G	1: 127,479,067 (GRCm39)	Y151H	possibly damaging	Het
Trio	A	G	15: 27,902,834 (GRCm39)	I209T	probably benign	Het
Ubqln3	A	G	7: 103,791,640 (GRCm39)	F150S	probably damaging	Het
Ubr5	T	C	15: 38,030,901 (GRCm39)	S425G	possibly damaging	Het
Vmn2r52	T	A	7: 9,904,861 (GRCm39)	H326L	probably damaging	Het

Other mutations in Tubal3

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00595:Tubal3	APN	13	3,983,015 (GRCm39)	missense	probably damaging	1.00
IGL02053:Tubal3	APN	13	3,983,159 (GRCm39)	missense	probably damaging	0.97
IGL02120:Tubal3	APN	13	3,980,675 (GRCm39)	missense	probably damaging	0.96
IGL02426:Tubal3	APN	13	3,982,750 (GRCm39)	missense	probably damaging	0.99
IGL02548:Tubal3	APN	13	3,980,554 (GRCm39)	missense	probably benign	0.05
IGL02981:Tubal3	APN	13	3,983,257 (GRCm39)	missense	probably benign	0.02
R0458:Tubal3	UTSW	13	3,983,137 (GRCm39)	missense	probably damaging	1.00
R1626:Tubal3	UTSW	13	3,982,841 (GRCm39)	missense	probably damaging	1.00
R1657:Tubal3	UTSW	13	3,983,011 (GRCm39)	missense	possibly damaging	0.87
R2084:Tubal3	UTSW	13	3,978,192 (GRCm39)	missense	possibly damaging	0.62
R3545:Tubal3	UTSW	13	3,983,560 (GRCm39)	makesense	probably null
R3976:Tubal3	UTSW	13	3,982,946 (GRCm39)	missense	probably benign
R4700:Tubal3	UTSW	13	3,983,514 (GRCm39)	missense	probably damaging	0.99
R4722:Tubal3	UTSW	13	3,978,185 (GRCm39)	missense	probably damaging	1.00
R6474:Tubal3	UTSW	13	3,983,107 (GRCm39)	missense	probably benign	0.10
R7049:Tubal3	UTSW	13	3,982,756 (GRCm39)	missense	probably damaging	1.00
R7082:Tubal3	UTSW	13	3,983,050 (GRCm39)	missense	possibly damaging	0.56
R7273:Tubal3	UTSW	13	3,980,675 (GRCm39)	missense	probably damaging	0.96
R7586:Tubal3	UTSW	13	3,978,198 (GRCm39)	missense	possibly damaging	0.78
R8805:Tubal3	UTSW	13	3,983,293 (GRCm39)	missense	probably damaging	1.00
R8921:Tubal3	UTSW	13	3,983,428 (GRCm39)	missense	probably damaging	1.00
R9043:Tubal3	UTSW	13	3,982,708 (GRCm39)	nonsense	probably null
R9173:Tubal3	UTSW	13	3,983,050 (GRCm39)	missense	possibly damaging	0.86
R9487:Tubal3	UTSW	13	3,980,674 (GRCm39)	missense	probably benign	0.03
Z1088:Tubal3	UTSW	13	3,983,511 (GRCm39)	missense	probably benign	0.06

Predicted Primers

PCR Primer
(F):5'- TGCAGCCATGAAATCTAGGAC -3'
(R):5'- GGCTCTCAGTTAGCAAAGGTG -3'

Sequencing Primer
(F):5'- CCATGAAATCTAGGACCTCTGTTCAG -3'
(R):5'- GGCTCTCAGTTAGCAAAGGTGAATTC -3'

Posted On

2016-11-08