Mutagenetix > Incidental Mutation

Incidental Mutation 'R5514:Aldh3a1'

440248

Institutional Source

Beutler Lab

Gene Symbol

Aldh3a1

Ensembl Gene

ENSMUSG00000019102

Gene Name

aldehyde dehydrogenase family 3, subfamily A1

Synonyms

Ahd-4, Aldh, Aldh3, Ahd4

MMRRC Submission

043074-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R5514 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

61099336-61109244 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

T to C at 61108867 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Serine to Proline at position 423 (S423P)

Ref Sequence

ENSEMBL: ENSMUSP00000104356 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000019246] [ENSMUST00000108716]

AlphaFold

P47739

Predicted Effect

probably damaging
Transcript: ENSMUST00000019246
AA Change: S423P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000019246
Gene: ENSMUSG00000019102
AA Change: S423P

Domain	Start	End	E-Value	Type
Pfam:Aldedh	1	428	3.6e-96	PFAM

Predicted Effect

probably damaging
Transcript: ENSMUST00000108716
AA Change: S423P

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000104356
Gene: ENSMUSG00000019102
AA Change: S423P

Domain	Start	End	E-Value	Type
Pfam:Aldedh	1	428	4.1e-98	PFAM
Pfam:LuxC	4	389	9.8e-11	PFAM

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.4%
20x: 95.5%

Validation Efficiency

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] Aldehyde dehydrogenases oxidize various aldehydes to the corresponding acids. They are involved in the detoxification of alcohol-derived acetaldehyde and in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. The enzyme encoded by this gene forms a cytoplasmic homodimer that preferentially oxidizes aromatic and medium-chain (6 carbons or more) saturated and unsaturated aldehyde substrates. It is thought to promote resistance to UV and 4-hydroxy-2-nonenal-induced oxidative damage in the cornea. The gene is located within the Smith-Magenis syndrome region on chromosome 17. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Sep 2008]
PHENOTYPE: Homozygous mutation of this gene does not result in a phenotype. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 61 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Adam17	T	C	12: 21,390,520 (GRCm39)	S382G	probably damaging	Het
Agr2	G	A	12: 36,046,090 (GRCm39)	V74I	probably benign	Het
Ampd1	C	T	3: 102,986,488 (GRCm39)	H56Y	possibly damaging	Het
Arhgef2	C	A	3: 88,550,304 (GRCm39)	P670T	probably benign	Het
Blk	T	G	14: 63,615,930 (GRCm39)	D333A	probably damaging	Het
Bmi1	T	C	2: 18,686,714 (GRCm39)	I31T	probably damaging	Het
Cacna1d	G	A	14: 30,072,790 (GRCm39)	Q62*	probably null	Het
Ccdc88c	A	G	12: 100,879,698 (GRCm39)	S1801P	probably damaging	Het
Cdkal1	C	T	13: 29,961,270 (GRCm39)	A100T	probably damaging	Het
Cfap251	G	T	5: 123,425,829 (GRCm39)		probably null	Het
Chst4	G	T	8: 110,756,606 (GRCm39)	S419Y	probably damaging	Het
Cntn4	T	C	6: 106,649,844 (GRCm39)	I680T	probably damaging	Het
Ddx55	T	C	5: 124,694,875 (GRCm39)	V101A	probably damaging	Het
Ddx60	A	T	8: 62,411,091 (GRCm39)	E451V	probably damaging	Het
Dffa	T	A	4: 149,190,772 (GRCm39)		probably null	Het
Dgkd	A	G	1: 87,861,832 (GRCm39)	R796G	probably damaging	Het
Dzank1	T	A	2: 144,323,605 (GRCm39)	M614L	probably benign	Het
Elf2	G	T	3: 51,215,555 (GRCm39)	Q52K	probably damaging	Het
Fcamr	T	A	1: 130,741,793 (GRCm39)	L522Q	probably damaging	Het
Fscn2	T	C	11: 120,258,858 (GRCm39)	Y468H	probably damaging	Het
Gm12689	T	C	4: 99,184,402 (GRCm39)	I85T	unknown	Het
Gm4787	A	G	12: 81,425,102 (GRCm39)	V352A	possibly damaging	Het
Gtsf1	T	C	15: 103,336,802 (GRCm39)	Q13R	probably benign	Het
Itpkb	G	A	1: 180,241,474 (GRCm39)	V715M	probably damaging	Het
Jmjd1c	T	A	10: 67,053,928 (GRCm39)	S263T	probably damaging	Het
Krba1	T	G	6: 48,390,429 (GRCm39)	L736R	probably damaging	Het
Lrrc8d	C	G	5: 105,960,650 (GRCm39)	F353L	probably damaging	Het
Lrrc8d	G	A	5: 105,960,651 (GRCm39)	E354K	probably benign	Het
Mtor	T	A	4: 148,630,901 (GRCm39)	V2286E	probably damaging	Het
Mybbp1a	T	A	11: 72,341,462 (GRCm39)	V1100E	possibly damaging	Het
Myo5a	G	A	9: 75,061,048 (GRCm39)	G518D	probably damaging	Het
Nalcn	A	T	14: 123,521,123 (GRCm39)	I1594N	probably benign	Het
Nav1	C	G	1: 135,398,299 (GRCm39)	G761A	probably benign	Het
Ncoa2	A	T	1: 13,251,445 (GRCm39)	L276H	probably damaging	Het
Ndufaf7	T	C	17: 79,245,051 (GRCm39)	Y57H	probably damaging	Het
Nfkb2	A	G	19: 46,299,847 (GRCm39)	Y807C	probably damaging	Het
Nid2	A	T	14: 19,852,535 (GRCm39)	Q1081L	probably damaging	Het
Nkain2	T	A	10: 31,827,189 (GRCm39)	I134F	probably damaging	Het
Nmu	A	C	5: 76,497,979 (GRCm39)	S69A	probably damaging	Het
Or4c15b	A	T	2: 89,112,817 (GRCm39)	I220N	probably damaging	Het
Or5t7	T	C	2: 86,507,225 (GRCm39)	I151V	probably benign	Het
Pard3	A	G	8: 128,153,086 (GRCm39)	R886G	probably damaging	Het
Pde6b	G	T	5: 108,571,317 (GRCm39)	Q423H	probably benign	Het
Pip5k1b	A	T	19: 24,327,505 (GRCm39)	D450E	probably damaging	Het
Plcg1	T	C	2: 160,595,275 (GRCm39)		probably null	Het
Pnpt1	T	C	11: 29,103,246 (GRCm39)	S504P	possibly damaging	Het
Pomt2	A	T	12: 87,175,797 (GRCm39)	D312E	probably damaging	Het
Ppp1r1b	T	C	11: 98,246,228 (GRCm39)	L70P	probably damaging	Het
Prr5	C	A	15: 84,587,096 (GRCm39)	P282Q	probably benign	Het
Reln	A	T	5: 22,176,883 (GRCm39)	W1928R	possibly damaging	Het
Sacm1l	A	T	9: 123,415,419 (GRCm39)	R465*	probably null	Het
Sema7a	A	G	9: 57,863,046 (GRCm39)	Y239C	probably damaging	Het
Slc35e2	C	T	4: 155,694,483 (GRCm39)	P10L	probably benign	Het
Svep1	T	C	4: 58,044,054 (GRCm39)	T3531A	possibly damaging	Het
Tjp1	A	T	7: 65,004,609 (GRCm39)	W19R	probably damaging	Het
Tmc2	T	A	2: 130,083,564 (GRCm39)	M507K	possibly damaging	Het
Unc13a	A	G	8: 72,095,795 (GRCm39)	Y1241H	probably damaging	Het
Upp1	C	T	11: 9,081,771 (GRCm39)	P103S	probably damaging	Het
Vldlr	A	G	19: 27,221,624 (GRCm39)	E663G	probably damaging	Het
Vmn2r68	G	A	7: 84,886,767 (GRCm39)	T49I	possibly damaging	Het
Xirp2	A	T	2: 67,335,465 (GRCm39)	M95L	probably benign	Het

Other mutations in Aldh3a1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL00510:Aldh3a1	APN	11	61,104,422 (GRCm39)	missense	probably damaging	1.00
IGL00833:Aldh3a1	APN	11	61,108,006 (GRCm39)	missense	probably damaging	0.99
IGL02281:Aldh3a1	APN	11	61,107,949 (GRCm39)	splice site	probably null
IGL02608:Aldh3a1	APN	11	61,107,147 (GRCm39)	missense	probably damaging	1.00
IGL03294:Aldh3a1	APN	11	61,105,548 (GRCm39)	missense	probably damaging	1.00
R0006:Aldh3a1	UTSW	11	61,107,927 (GRCm39)	missense	probably damaging	1.00
R0453:Aldh3a1	UTSW	11	61,106,338 (GRCm39)	missense	probably benign	0.01
R0612:Aldh3a1	UTSW	11	61,105,445 (GRCm39)	missense	probably damaging	1.00
R0637:Aldh3a1	UTSW	11	61,106,304 (GRCm39)	unclassified	probably benign
R1613:Aldh3a1	UTSW	11	61,105,377 (GRCm39)	missense	probably damaging	0.98
R3423:Aldh3a1	UTSW	11	61,106,362 (GRCm39)	missense	probably damaging	1.00
R3772:Aldh3a1	UTSW	11	61,105,431 (GRCm39)	missense	possibly damaging	0.86
R4673:Aldh3a1	UTSW	11	61,104,320 (GRCm39)	missense	probably benign
R4997:Aldh3a1	UTSW	11	61,103,137 (GRCm39)	missense	probably benign	0.02
R5425:Aldh3a1	UTSW	11	61,104,407 (GRCm39)	missense	probably benign	0.01
R5679:Aldh3a1	UTSW	11	61,107,994 (GRCm39)	missense	probably benign	0.00
R6150:Aldh3a1	UTSW	11	61,104,334 (GRCm39)	missense	probably benign
R6662:Aldh3a1	UTSW	11	61,105,481 (GRCm39)	missense	probably benign	0.01
R6986:Aldh3a1	UTSW	11	61,105,077 (GRCm39)	missense	probably damaging	1.00
R8720:Aldh3a1	UTSW	11	61,104,305 (GRCm39)	missense	probably benign	0.32
R8821:Aldh3a1	UTSW	11	61,107,142 (GRCm39)	missense	probably damaging	1.00
R8831:Aldh3a1	UTSW	11	61,107,142 (GRCm39)	missense	probably damaging	1.00
R9034:Aldh3a1	UTSW	11	61,104,475 (GRCm39)	missense	probably benign	0.01
R9599:Aldh3a1	UTSW	11	61,107,912 (GRCm39)	missense	probably damaging	1.00
R9793:Aldh3a1	UTSW	11	61,108,927 (GRCm39)	missense	probably damaging	1.00

Predicted Primers

PCR Primer
(F):5'- CATGACTGGAGTGAGACTCTC -3'
(R):5'- TGAAGTAGCCCTCTCAATGCC -3'

Sequencing Primer
(F):5'- AGTGAGACTCTCTCTGGACAC -3'
(R):5'- CGGGGCATCTGCTAGGACAG -3'

Posted On

2016-11-08