Incidental Mutation 'R5649:Or2ag1'
| ID |
441323 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Or2ag1
|
| Ensembl Gene |
ENSMUSG00000109058 |
| Gene Name |
olfactory receptor family 2 subfamily AG member 1 |
| Synonyms |
Olfr705, MOR283-2, GA_x6K02T2PBJ9-9256348-9255398 |
| MMRRC Submission |
043170-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.166)
|
| Stock # |
R5649 (G1)
|
| Quality Score |
225 |
|
Status
|
Not validated
|
| Chromosome |
7 |
| Chromosomal Location |
106472500-106473450 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
T to C
at 106313373 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Arginine to Glycine
at position 172
(R172G)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000149773
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000080925]
[ENSMUST00000216868]
|
| AlphaFold |
Q9EPF7 |
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000080925
AA Change: R172G
PolyPhen 2
Score 0.895 (Sensitivity: 0.82; Specificity: 0.94)
|
| SMART Domains |
Protein: ENSMUSP00000079726
Gene: ENSMUSG00000073900
AA Change: R172G
| Domain | Start | End | E-Value | Type |
|---|
|
Pfam:7tm_4
|
31 |
308 |
2.1e-48 |
PFAM |
|
Pfam:7TM_GPCR_Srsx
|
35 |
305 |
1.5e-7 |
PFAM |
|
Pfam:7tm_1
|
41 |
290 |
1.5e-21 |
PFAM |
|
| Predicted Effect |
possibly damaging
Transcript: ENSMUST00000216868
AA Change: R172G
PolyPhen 2
Score 0.895 (Sensitivity: 0.82; Specificity: 0.94)
|
| Coding Region Coverage |
- 1x: 99.4%
- 3x: 98.8%
- 10x: 97.5%
- 20x: 96.0%
|
| Validation Efficiency |
|
| MGI Phenotype |
FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 40 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| Abca12 |
T |
C |
1: 71,330,501 (GRCm39) |
T1385A |
probably damaging |
Het |
| Apc2 |
T |
A |
10: 80,149,972 (GRCm39) |
D1646E |
probably damaging |
Het |
| Aspm |
G |
A |
1: 139,407,407 (GRCm39) |
R2098H |
probably benign |
Het |
| Atl3 |
C |
A |
19: 7,509,592 (GRCm39) |
T435N |
possibly damaging |
Het |
| Cdh22 |
G |
T |
2: 164,958,200 (GRCm39) |
T589K |
probably damaging |
Het |
| Cnot3 |
T |
C |
7: 3,661,082 (GRCm39) |
L561S |
probably benign |
Het |
| Col5a1 |
A |
G |
2: 27,841,468 (GRCm39) |
D363G |
unknown |
Het |
| Cyp24a1 |
T |
C |
2: 170,338,229 (GRCm39) |
D105G |
possibly damaging |
Het |
| Dennd4a |
C |
A |
9: 64,758,491 (GRCm39) |
|
probably null |
Het |
| Dnah8 |
A |
G |
17: 31,019,561 (GRCm39) |
K3878R |
probably benign |
Het |
| Dock4 |
T |
C |
12: 40,894,539 (GRCm39) |
S1900P |
probably benign |
Het |
| Fancg |
A |
G |
4: 43,008,736 (GRCm39) |
L167P |
probably damaging |
Het |
| Ighd2-8 |
A |
G |
12: 113,414,487 (GRCm39) |
S1P |
possibly damaging |
Het |
| Kif28 |
A |
G |
1: 179,525,336 (GRCm39) |
|
probably null |
Het |
| Mrpl55 |
T |
A |
11: 59,095,397 (GRCm39) |
C20* |
probably null |
Het |
| Myo5a |
A |
G |
9: 75,079,001 (GRCm39) |
K920E |
possibly damaging |
Het |
| Naa35 |
G |
A |
13: 59,770,680 (GRCm39) |
|
probably benign |
Het |
| Olfm3 |
A |
G |
3: 114,890,573 (GRCm39) |
R76G |
probably damaging |
Het |
| Or14a258 |
T |
C |
7: 86,035,521 (GRCm39) |
M116V |
probably damaging |
Het |
| Pcdha12 |
A |
T |
18: 37,155,468 (GRCm39) |
D729V |
probably benign |
Het |
| Phf11c |
T |
C |
14: 59,622,981 (GRCm39) |
|
probably null |
Het |
| Phf20 |
T |
A |
2: 156,093,688 (GRCm39) |
|
probably null |
Het |
| Plbd1 |
T |
A |
6: 136,593,987 (GRCm39) |
Y376F |
probably benign |
Het |
| Poglut1 |
A |
G |
16: 38,352,173 (GRCm39) |
V257A |
probably damaging |
Het |
| Reln |
A |
G |
5: 22,106,623 (GRCm39) |
I3249T |
probably benign |
Het |
| Rgsl1 |
G |
A |
1: 153,701,639 (GRCm39) |
P272S |
possibly damaging |
Het |
| Slc15a2 |
A |
T |
16: 36,592,472 (GRCm39) |
Y197* |
probably null |
Het |
| Slc45a2 |
C |
T |
15: 11,012,693 (GRCm39) |
T232I |
probably benign |
Het |
| Ssc5d |
T |
A |
7: 4,929,517 (GRCm39) |
|
probably null |
Het |
| Thbs2 |
T |
C |
17: 14,910,215 (GRCm39) |
Y128C |
probably damaging |
Het |
| Them4 |
A |
T |
3: 94,238,851 (GRCm39) |
L219F |
possibly damaging |
Het |
| Tmem30b |
G |
T |
12: 73,592,940 (GRCm39) |
N58K |
probably benign |
Het |
| Trappc2b |
T |
C |
11: 51,576,799 (GRCm39) |
E33G |
probably benign |
Het |
| Ttc29 |
G |
A |
8: 78,972,942 (GRCm39) |
E131K |
possibly damaging |
Het |
| Vmn1r29 |
C |
G |
6: 58,284,676 (GRCm39) |
S132C |
probably benign |
Het |
| Vmn1r53 |
G |
A |
6: 90,200,742 (GRCm39) |
A194V |
probably benign |
Het |
| Wdr86 |
A |
T |
5: 24,923,085 (GRCm39) |
H202Q |
probably benign |
Het |
| Xirp2 |
A |
G |
2: 67,347,239 (GRCm39) |
D3160G |
probably benign |
Het |
| Xkr5 |
T |
C |
8: 18,983,982 (GRCm39) |
D520G |
probably benign |
Het |
| Zfp607b |
T |
G |
7: 27,403,406 (GRCm39) |
C621G |
probably damaging |
Het |
|
| Other mutations in Or2ag1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01743:Or2ag1
|
APN |
7 |
106,313,541 (GRCm39) |
missense |
possibly damaging |
0.48 |
|
IGL02203:Or2ag1
|
APN |
7 |
106,313,837 (GRCm39) |
missense |
probably benign |
0.02 |
|
IGL02342:Or2ag1
|
APN |
7 |
106,313,232 (GRCm39) |
missense |
probably benign |
0.13 |
|
IGL02544:Or2ag1
|
APN |
7 |
106,313,742 (GRCm39) |
missense |
probably benign |
0.39 |
|
IGL02569:Or2ag1
|
APN |
7 |
106,313,793 (GRCm39) |
missense |
probably benign |
0.00 |
|
PIT4651001:Or2ag1
|
UTSW |
7 |
106,472,730 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0501:Or2ag1
|
UTSW |
7 |
106,313,810 (GRCm39) |
missense |
probably benign |
0.01 |
|
R0504:Or2ag1
|
UTSW |
7 |
106,313,908 (GRCm39) |
splice site |
probably benign |
|
|
R0536:Or2ag1
|
UTSW |
7 |
106,313,528 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0633:Or2ag1
|
UTSW |
7 |
106,313,184 (GRCm39) |
missense |
probably benign |
0.03 |
|
R0686:Or2ag1
|
UTSW |
7 |
106,313,585 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R1225:Or2ag1
|
UTSW |
7 |
106,313,731 (GRCm39) |
missense |
probably benign |
0.22 |
|
R1725:Or2ag1
|
UTSW |
7 |
106,313,265 (GRCm39) |
missense |
probably benign |
|
|
R1864:Or2ag1
|
UTSW |
7 |
106,313,030 (GRCm39) |
missense |
possibly damaging |
0.87 |
|
R2065:Or2ag1
|
UTSW |
7 |
106,313,373 (GRCm39) |
missense |
probably benign |
0.12 |
|
R2068:Or2ag1
|
UTSW |
7 |
106,313,373 (GRCm39) |
missense |
probably benign |
0.12 |
|
R2081:Or2ag1
|
UTSW |
7 |
106,313,405 (GRCm39) |
missense |
probably benign |
|
|
R4135:Or2ag1
|
UTSW |
7 |
106,313,210 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5858:Or2ag1
|
UTSW |
7 |
106,472,975 (GRCm39) |
missense |
probably benign |
0.01 |
|
R6083:Or2ag1
|
UTSW |
7 |
106,472,789 (GRCm39) |
missense |
probably damaging |
0.98 |
|
R7144:Or2ag1
|
UTSW |
7 |
106,473,075 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7214:Or2ag1
|
UTSW |
7 |
106,473,474 (GRCm39) |
start gained |
probably benign |
|
|
R7366:Or2ag1
|
UTSW |
7 |
106,472,603 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7445:Or2ag1
|
UTSW |
7 |
106,472,549 (GRCm39) |
missense |
possibly damaging |
0.55 |
|
R8171:Or2ag1
|
UTSW |
7 |
106,313,826 (GRCm39) |
missense |
|
|
|
R8171:Or2ag1
|
UTSW |
7 |
106,313,825 (GRCm39) |
missense |
probably benign |
|
|
R8986:Or2ag1
|
UTSW |
7 |
106,473,050 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9285:Or2ag1
|
UTSW |
7 |
106,472,715 (GRCm39) |
missense |
probably benign |
0.11 |
|
| Predicted Primers |
PCR Primer
(F):5'- TGCCAACCACAGTCAGATGG -3'
(R):5'- CTGTCCTTTATGGCTTATGACAGG -3'
Sequencing Primer
(F):5'- CTCATTTGAGGGCATATGGAGCAC -3'
(R):5'- ACAGGTATGTGGCCATTTGTCATC -3'
|
| Posted On |
2016-11-08 |
Incidental Mutation