Incidental Mutation 'H8786:Rptn'
ID 44429
Institutional Source Beutler Lab
Gene Symbol Rptn
Ensembl Gene ENSMUSG00000041984
Gene Name repetin
Synonyms
Accession Numbers
Essential gene? Probably non essential (E-score: 0.095) question?
Stock # H8786 (G3) of strain 617
Quality Score 225
Status Not validated
Chromosome 3
Chromosomal Location 93301006-93306749 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 93305180 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Threonine to Alanine at position 838 (T838A)
Ref Sequence ENSEMBL: ENSMUSP00000044998 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000045912]
AlphaFold P97347
Predicted Effect possibly damaging
Transcript: ENSMUST00000045912
AA Change: T838A

PolyPhen 2 Score 0.528 (Sensitivity: 0.88; Specificity: 0.90)
SMART Domains Protein: ENSMUSP00000044998
Gene: ENSMUSG00000041984
AA Change: T838A

DomainStartEndE-ValueType
Pfam:S_100 4 46 3.2e-13 PFAM
Blast:EFh 53 81 5e-10 BLAST
low complexity region 189 204 N/A INTRINSIC
low complexity region 237 252 N/A INTRINSIC
Blast:CTD 318 461 1e-7 BLAST
low complexity region 1007 1041 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000191784
Predicted Effect noncoding transcript
Transcript: ENSMUST00000195137
Coding Region Coverage
  • 1x: 99.7%
  • 3x: 99.0%
  • 10x: 97.4%
  • 20x: 95.3%
Validation Efficiency
Allele List at MGI

All alleles(1) : Targeted, knock-out(1)

Other mutations in this stock
Total: 56 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4921504E06Rik A G 2: 19,498,905 (GRCm39) Y363H probably benign Het
4933402N03Rik T A 7: 130,740,906 (GRCm39) R103S probably damaging Het
Aars1 A G 8: 111,772,187 (GRCm39) D459G probably benign Het
Adam25 A T 8: 41,207,261 (GRCm39) M176L probably benign Het
Adcy5 A G 16: 35,087,551 (GRCm39) I471V probably damaging Het
Ano8 A T 8: 71,931,388 (GRCm39) probably benign Het
Arhgef28 T A 13: 98,083,461 (GRCm39) Q1136L probably damaging Het
Atp13a3 A T 16: 30,178,543 (GRCm39) C164* probably null Het
Avl9 G A 6: 56,734,295 (GRCm39) A625T probably damaging Het
Avpr1a A T 10: 122,285,373 (GRCm39) M222L probably benign Het
B4galnt4 A T 7: 140,651,235 (GRCm39) M939L probably damaging Het
B4galt6 A G 18: 20,822,001 (GRCm39) F331S probably benign Het
C2cd2 G T 16: 97,680,840 (GRCm39) Q325K possibly damaging Het
Caml T G 13: 55,776,409 (GRCm39) L216R probably damaging Het
Cd200r4 A G 16: 44,653,736 (GRCm39) T132A possibly damaging Het
Ces1h A C 8: 94,089,550 (GRCm39) V283G probably damaging Het
Clptm1 A T 7: 19,369,629 (GRCm39) V427D possibly damaging Het
Drd1 T A 13: 54,207,122 (GRCm39) N357I possibly damaging Het
Foxq1 C G 13: 31,743,441 (GRCm39) S181W probably damaging Het
Gfra2 C T 14: 71,215,818 (GRCm39) T169M possibly damaging Het
Gm42542 T C 6: 68,872,634 (GRCm39) probably null Het
Hoxa13 CGG CGNGG 6: 52,260,636 (GRCm38) probably null Het
Hsd11b1 C A 1: 192,922,560 (GRCm39) A166S probably benign Het
Kcnab3 T A 11: 69,219,093 (GRCm39) F101L probably damaging Het
Klf6 C A 13: 5,911,790 (GRCm39) H51Q probably damaging Het
Krtap4-8 G A 11: 99,670,898 (GRCm39) P191L unknown Het
Lrrk2 T A 15: 91,557,561 (GRCm39) N26K probably benign Het
Mrgprd T C 7: 144,876,004 (GRCm39) S292P probably benign Het
Ms4a8a A G 19: 11,053,725 (GRCm39) I127T possibly damaging Het
Myo7a T G 7: 97,744,985 (GRCm39) N280T possibly damaging Het
Nipal4 A G 11: 46,041,304 (GRCm39) F297S probably damaging Het
Npas1 A G 7: 16,195,275 (GRCm39) I351T possibly damaging Het
Or12k7 A G 2: 36,958,341 (GRCm39) E8G probably benign Het
Or4a72 C A 2: 89,405,623 (GRCm39) G149V probably damaging Het
Or9e1 A T 11: 58,732,146 (GRCm39) I69F probably benign Het
Parp11 A G 6: 127,448,598 (GRCm39) T72A probably damaging Het
Pik3c3 T C 18: 30,427,396 (GRCm39) V300A probably damaging Het
Pik3cb T C 9: 98,928,612 (GRCm39) E881G possibly damaging Het
Polr2h T A 16: 20,539,281 (GRCm39) L57* probably null Het
Rela T A 19: 5,697,046 (GRCm39) S418T probably benign Het
Sez6l2 T A 7: 126,560,955 (GRCm39) N413K possibly damaging Het
Slc6a2 A G 8: 93,721,268 (GRCm39) I466V probably benign Het
Slco4c1 A T 1: 96,768,876 (GRCm39) C329S probably damaging Het
Sppl2c A G 11: 104,077,691 (GRCm39) M164V probably benign Het
Spta1 G A 1: 174,007,405 (GRCm39) V212M probably damaging Het
Sqor A C 2: 122,634,288 (GRCm39) I142L probably benign Het
Suco T C 1: 161,680,420 (GRCm39) E317G probably damaging Het
Tlk2 T A 11: 105,145,805 (GRCm39) I337N possibly damaging Het
Tln1 A T 4: 43,544,589 (GRCm39) N1113K probably damaging Het
Tmc2 A G 2: 130,068,182 (GRCm39) Y234C probably damaging Het
Tmem167 A C 13: 90,246,585 (GRCm39) K36N probably damaging Het
Trim72 T C 7: 127,603,963 (GRCm39) L103P probably damaging Het
Tut4 T C 4: 108,408,012 (GRCm39) probably null Het
Urb1 T A 16: 90,566,357 (GRCm39) M1477L probably benign Het
Vwa2 T A 19: 56,898,164 (GRCm39) M721K possibly damaging Het
Zfp143 T G 7: 109,693,575 (GRCm39) D636E probably damaging Het
Other mutations in Rptn
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01062:Rptn APN 3 93,304,489 (GRCm39) missense probably benign
IGL01070:Rptn APN 3 93,305,483 (GRCm39) missense possibly damaging 0.86
IGL01625:Rptn APN 3 93,305,201 (GRCm39) missense probably benign 0.18
IGL01678:Rptn APN 3 93,304,118 (GRCm39) missense probably benign 0.00
IGL01716:Rptn APN 3 93,304,017 (GRCm39) missense possibly damaging 0.53
IGL01767:Rptn APN 3 93,302,946 (GRCm39) missense probably benign 0.00
IGL01872:Rptn APN 3 93,304,154 (GRCm39) missense probably benign
IGL02000:Rptn APN 3 93,303,735 (GRCm39) missense probably benign 0.01
IGL02066:Rptn APN 3 93,304,436 (GRCm39) missense probably benign 0.01
IGL02090:Rptn APN 3 93,304,041 (GRCm39) missense possibly damaging 0.85
IGL02116:Rptn APN 3 93,302,404 (GRCm39) missense possibly damaging 0.88
IGL02216:Rptn APN 3 93,303,080 (GRCm39) missense possibly damaging 0.73
IGL02368:Rptn APN 3 93,304,478 (GRCm39) missense probably benign 0.18
IGL02820:Rptn APN 3 93,304,227 (GRCm39) missense probably benign 0.01
IGL03323:Rptn APN 3 93,304,460 (GRCm39) missense probably benign
IGL03404:Rptn APN 3 93,305,436 (GRCm39) missense possibly damaging 0.53
D3080:Rptn UTSW 3 93,303,135 (GRCm39) missense possibly damaging 0.85
IGL03097:Rptn UTSW 3 93,304,680 (GRCm39) missense probably damaging 1.00
LCD18:Rptn UTSW 3 93,304,848 (GRCm39) missense probably benign
PIT4431001:Rptn UTSW 3 93,304,704 (GRCm39) small deletion probably benign
PIT4480001:Rptn UTSW 3 93,304,977 (GRCm39) missense possibly damaging 0.85
R1024:Rptn UTSW 3 93,305,532 (GRCm39) missense possibly damaging 0.72
R1119:Rptn UTSW 3 93,303,552 (GRCm39) missense possibly damaging 0.96
R1727:Rptn UTSW 3 93,304,445 (GRCm39) missense possibly damaging 0.73
R1901:Rptn UTSW 3 93,304,017 (GRCm39) missense possibly damaging 0.53
R2247:Rptn UTSW 3 93,304,136 (GRCm39) missense probably benign
R2921:Rptn UTSW 3 93,306,015 (GRCm39) missense possibly damaging 0.96
R2922:Rptn UTSW 3 93,306,015 (GRCm39) missense possibly damaging 0.96
R2923:Rptn UTSW 3 93,306,015 (GRCm39) missense possibly damaging 0.96
R3901:Rptn UTSW 3 93,305,664 (GRCm39) missense probably benign
R3936:Rptn UTSW 3 93,302,883 (GRCm39) missense possibly damaging 0.79
R4304:Rptn UTSW 3 93,304,238 (GRCm39) missense probably benign 0.33
R4491:Rptn UTSW 3 93,303,818 (GRCm39) nonsense probably null
R4654:Rptn UTSW 3 93,304,792 (GRCm39) missense possibly damaging 0.53
R4870:Rptn UTSW 3 93,303,776 (GRCm39) nonsense probably null
R5246:Rptn UTSW 3 93,305,036 (GRCm39) missense possibly damaging 0.53
R5246:Rptn UTSW 3 93,304,140 (GRCm39) missense probably damaging 0.98
R5544:Rptn UTSW 3 93,305,780 (GRCm39) missense possibly damaging 0.53
R5555:Rptn UTSW 3 93,304,008 (GRCm39) missense probably benign
R5896:Rptn UTSW 3 93,305,639 (GRCm39) nonsense probably null
R5956:Rptn UTSW 3 93,305,334 (GRCm39) missense possibly damaging 0.53
R6192:Rptn UTSW 3 93,305,437 (GRCm39) missense possibly damaging 0.53
R6209:Rptn UTSW 3 93,305,437 (GRCm39) missense possibly damaging 0.53
R6224:Rptn UTSW 3 93,305,437 (GRCm39) missense possibly damaging 0.53
R6226:Rptn UTSW 3 93,305,437 (GRCm39) missense possibly damaging 0.53
R6227:Rptn UTSW 3 93,305,437 (GRCm39) missense possibly damaging 0.53
R6230:Rptn UTSW 3 93,305,437 (GRCm39) missense possibly damaging 0.53
R6247:Rptn UTSW 3 93,305,437 (GRCm39) missense possibly damaging 0.53
R6258:Rptn UTSW 3 93,305,437 (GRCm39) missense possibly damaging 0.53
R6393:Rptn UTSW 3 93,304,506 (GRCm39) missense probably benign
R6513:Rptn UTSW 3 93,303,419 (GRCm39) missense possibly damaging 0.73
R6854:Rptn UTSW 3 93,305,430 (GRCm39) missense possibly damaging 0.53
R6855:Rptn UTSW 3 93,305,558 (GRCm39) missense probably benign 0.33
R6884:Rptn UTSW 3 93,303,096 (GRCm39) missense probably benign 0.33
R7018:Rptn UTSW 3 93,305,207 (GRCm39) missense possibly damaging 0.73
R7241:Rptn UTSW 3 93,303,261 (GRCm39) missense probably benign 0.01
R7337:Rptn UTSW 3 93,304,212 (GRCm39) missense probably benign 0.03
R7754:Rptn UTSW 3 93,303,228 (GRCm39) missense probably damaging 0.98
R7794:Rptn UTSW 3 93,303,036 (GRCm39) missense probably benign
R7801:Rptn UTSW 3 93,305,531 (GRCm39) missense possibly damaging 0.53
R8161:Rptn UTSW 3 93,304,000 (GRCm39) small deletion probably benign
R8374:Rptn UTSW 3 93,303,602 (GRCm39) nonsense probably null
R8671:Rptn UTSW 3 93,305,501 (GRCm39) missense probably benign 0.18
R8804:Rptn UTSW 3 93,303,150 (GRCm39) missense probably damaging 0.98
R8934:Rptn UTSW 3 93,303,219 (GRCm39) missense probably benign 0.00
R8938:Rptn UTSW 3 93,302,332 (GRCm39) missense possibly damaging 0.93
R9056:Rptn UTSW 3 93,304,412 (GRCm39) missense probably benign 0.33
R9082:Rptn UTSW 3 93,302,928 (GRCm39) missense possibly damaging 0.94
R9140:Rptn UTSW 3 93,303,445 (GRCm39) nonsense probably null
R9310:Rptn UTSW 3 93,304,384 (GRCm39) missense probably benign 0.00
R9392:Rptn UTSW 3 93,305,721 (GRCm39) missense probably benign
R9403:Rptn UTSW 3 93,302,349 (GRCm39) missense probably benign 0.17
R9564:Rptn UTSW 3 93,304,536 (GRCm39) missense probably benign
R9748:Rptn UTSW 3 93,304,761 (GRCm39) missense possibly damaging 0.85
X0018:Rptn UTSW 3 93,303,248 (GRCm39) nonsense probably null
Z1088:Rptn UTSW 3 93,304,734 (GRCm39) missense probably benign 0.01
Z1176:Rptn UTSW 3 93,302,325 (GRCm39) missense probably benign 0.26
Z1177:Rptn UTSW 3 93,305,194 (GRCm39) missense possibly damaging 0.73
Z1177:Rptn UTSW 3 93,303,019 (GRCm39) missense probably benign 0.01
Z1177:Rptn UTSW 3 93,302,950 (GRCm39) nonsense probably null
Predicted Primers PCR Primer
(F):5'- ATTCACACTGGCATCGGACAGAC -3'
(R):5'- GGCTCTTGCTGTACCTGAGCTAAG -3'

Sequencing Primer
(F):5'- CAGACAAGGACAGAGTTTTCATTATG -3'
(R):5'- ACTCTGGGTTTGACGCAC -3'
Posted On 2013-06-11