Incidental Mutation 'R5757:Clec4b1'
ID 445099
Institutional Source Beutler Lab
Gene Symbol Clec4b1
Ensembl Gene ENSMUSG00000030147
Gene Name C-type lectin domain family 4, member b1
Synonyms 1810046I24Rik, 1810046I24Rik, DCARbeta, DCAR, mDcar2
MMRRC Submission 043360-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.050) question?
Stock # R5757 (G1)
Quality Score 225
Status Not validated
Chromosome 6
Chromosomal Location 123026921-123048514 bp(+) (GRCm39)
Type of Mutation nonsense
DNA Base Change (assembly) T to A at 123046713 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Stop codon at position 157 (Y157*)
Ref Sequence ENSEMBL: ENSMUSP00000077636 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000077228] [ENSMUST00000078559]
AlphaFold Q7TS58
Predicted Effect probably null
Transcript: ENSMUST00000077228
AA Change: Y124*
SMART Domains Protein: ENSMUSP00000076466
Gene: ENSMUSG00000030147
AA Change: Y124*

DomainStartEndE-ValueType
transmembrane domain 15 37 N/A INTRINSIC
CLECT 45 170 2.95e-31 SMART
Predicted Effect probably null
Transcript: ENSMUST00000078559
AA Change: Y157*
SMART Domains Protein: ENSMUSP00000077636
Gene: ENSMUSG00000030147
AA Change: Y157*

DomainStartEndE-ValueType
Blast:CLECT 26 71 1e-9 BLAST
CLECT 78 203 2.95e-31 SMART
Coding Region Coverage
  • 1x: 99.5%
  • 3x: 98.8%
  • 10x: 97.4%
  • 20x: 95.5%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a member of the C-type lectin/C-type lectin-like domain (CTL/CTLD) superfamily. Members of this family share a common protein fold and have diverse functions, such as cell adhesion, cell-cell signalling, glycoprotein turnover, and roles in inflammation and immune response. The encoded type 2 transmembrane protein may play a role in dendritic cell function. Two transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 47 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca8a C T 11: 109,933,794 (GRCm39) A1204T probably benign Het
Adcy5 G T 16: 35,092,451 (GRCm39) R604L probably damaging Het
Ago4 A T 4: 126,419,877 (GRCm39) N33K probably damaging Het
Arid5b T C 10: 67,937,909 (GRCm39) Y406C probably damaging Het
Asgr1 A C 11: 69,945,778 (GRCm39) H18P probably benign Het
Asph A C 4: 9,637,722 (GRCm39) probably null Het
Brd4 G A 17: 32,420,272 (GRCm39) probably benign Het
Ccdc150 T A 1: 54,302,779 (GRCm39) I133N probably damaging Het
Cdon A C 9: 35,364,068 (GRCm39) H62P probably damaging Het
Clip1 G A 5: 123,765,460 (GRCm39) T810I probably benign Het
Crocc A T 4: 140,770,875 (GRCm39) L184Q probably damaging Het
Fat2 C T 11: 55,143,172 (GRCm39) G4226R probably damaging Het
Fbxo30 T A 10: 11,166,165 (GRCm39) C296S probably benign Het
Fndc3a T C 14: 72,794,025 (GRCm39) K883E probably benign Het
Glyr1 A T 16: 4,836,856 (GRCm39) M436K probably benign Het
Gm525 A T 11: 88,965,872 (GRCm39) Q38L probably benign Het
Gnas T A 2: 174,187,040 (GRCm39) V941D probably damaging Het
Hectd4 G C 5: 121,486,682 (GRCm39) E3226Q possibly damaging Het
Ints13 G A 6: 146,451,604 (GRCm39) R714C probably benign Het
Kif12 A T 4: 63,088,755 (GRCm39) W182R probably damaging Het
Kif21a A G 15: 90,835,548 (GRCm39) L1272P probably damaging Het
Klhl14 A C 18: 21,687,791 (GRCm39) Y544D probably damaging Het
Kntc1 T C 5: 123,945,372 (GRCm39) probably null Het
Lama1 G A 17: 68,045,782 (GRCm39) R229Q possibly damaging Het
Ltbp1 T A 17: 75,580,944 (GRCm39) probably null Het
Map4k5 A T 12: 69,871,429 (GRCm39) C498S probably damaging Het
Myh9 A T 15: 77,655,362 (GRCm39) V1198E probably benign Het
Ncoa6 T C 2: 155,253,528 (GRCm39) D950G probably damaging Het
Obsl1 G T 1: 75,469,699 (GRCm39) A1106D probably damaging Het
Or5m9 T A 2: 85,876,910 (GRCm39) V28E possibly damaging Het
Or8k27 T C 2: 86,275,922 (GRCm39) I135V probably benign Het
Otog T A 7: 45,890,545 (GRCm39) probably null Het
Oxtr A T 6: 112,454,222 (GRCm39) I14N probably damaging Het
Pfkfb3 A T 2: 11,485,141 (GRCm39) S490R probably damaging Het
Polk A C 13: 96,620,760 (GRCm39) M560R probably benign Het
Polq C T 16: 36,907,043 (GRCm39) H2335Y probably benign Het
Prr14 T A 7: 127,074,725 (GRCm39) V419D possibly damaging Het
Rflnb A G 11: 75,912,992 (GRCm39) V132A probably damaging Het
Rxfp1 T G 3: 79,568,627 (GRCm39) I283L possibly damaging Het
Ryr3 G A 2: 112,672,320 (GRCm39) R1384C probably damaging Het
Scnn1g T A 7: 121,337,438 (GRCm39) C100S probably damaging Het
Sfrp2 G C 3: 83,673,933 (GRCm39) G29R possibly damaging Het
Spop A G 11: 95,381,208 (GRCm39) H312R probably damaging Het
Tpx2 A G 2: 152,727,151 (GRCm39) probably null Het
Wdr4 A T 17: 31,718,063 (GRCm39) V337E probably damaging Het
Zbtb11 A G 16: 55,827,392 (GRCm39) N953D probably damaging Het
Zfp703 C T 8: 27,469,233 (GRCm39) P299L probably damaging Het
Other mutations in Clec4b1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02817:Clec4b1 APN 6 123,045,444 (GRCm39) missense possibly damaging 0.83
R0488:Clec4b1 UTSW 6 123,048,441 (GRCm39) missense probably damaging 0.99
R0526:Clec4b1 UTSW 6 123,046,729 (GRCm39) critical splice donor site probably null
R0675:Clec4b1 UTSW 6 123,048,405 (GRCm39) missense probably damaging 0.99
R2374:Clec4b1 UTSW 6 123,027,597 (GRCm39) missense probably damaging 1.00
R2504:Clec4b1 UTSW 6 123,042,904 (GRCm39) missense probably damaging 0.98
R3609:Clec4b1 UTSW 6 123,027,591 (GRCm39) missense probably damaging 0.99
R4062:Clec4b1 UTSW 6 123,045,443 (GRCm39) missense probably benign 0.03
R4081:Clec4b1 UTSW 6 123,046,733 (GRCm39) splice site probably null
R4865:Clec4b1 UTSW 6 123,045,428 (GRCm39) missense possibly damaging 0.84
R5172:Clec4b1 UTSW 6 123,048,414 (GRCm39) missense probably benign 0.34
R5204:Clec4b1 UTSW 6 123,048,494 (GRCm39) makesense probably null
R6129:Clec4b1 UTSW 6 123,045,461 (GRCm39) missense possibly damaging 0.50
R7598:Clec4b1 UTSW 6 123,048,427 (GRCm39) nonsense probably null
R8337:Clec4b1 UTSW 6 123,042,922 (GRCm39) missense probably benign 0.08
R8362:Clec4b1 UTSW 6 123,027,602 (GRCm39) missense probably benign 0.00
R8929:Clec4b1 UTSW 6 123,046,728 (GRCm39) critical splice donor site probably null
Z1188:Clec4b1 UTSW 6 123,027,005 (GRCm39) start gained probably benign
Predicted Primers PCR Primer
(F):5'- TGAACCCTGTAATACTATGTCATGG -3'
(R):5'- AAGAACCTTGATTGGGTGCC -3'

Sequencing Primer
(F):5'- GTCCTGGAACTCACTGTAGAC -3'
(R):5'- AATGTTTGGCTCATAGGACTCC -3'
Posted On 2016-11-21