Incidental Mutation 'R5765:Kif2b'
| ID |
446237 |
| Institutional Source |
Beutler Lab
|
| Gene Symbol |
Kif2b
|
| Ensembl Gene |
ENSMUSG00000046755 |
| Gene Name |
kinesin family member 2B |
| Synonyms |
1700063D03Rik |
| MMRRC Submission |
043366-MU
|
| Accession Numbers |
|
| Essential gene? |
Probably essential
(E-score: 0.756)
|
| Stock # |
R5765 (G1)
|
| Quality Score |
225 |
|
Status
|
Validated
|
| Chromosome |
11 |
| Chromosomal Location |
91466141-91468384 bp(-) (GRCm39) |
| Type of Mutation |
missense |
| DNA Base Change (assembly) |
C to T
at 91468068 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
Glutamic Acid to Lysine
at position 72
(E72K)
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000058084
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000061019]
|
| AlphaFold |
Q8C0N1 |
| Predicted Effect |
probably benign
Transcript: ENSMUST00000061019
AA Change: E72K
PolyPhen 2
Score 0.281 (Sensitivity: 0.91; Specificity: 0.88)
|
| SMART Domains |
Protein: ENSMUSP00000058084
Gene: ENSMUSG00000046755
AA Change: E72K
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
55 |
70 |
N/A |
INTRINSIC |
|
low complexity region
|
90 |
103 |
N/A |
INTRINSIC |
|
low complexity region
|
151 |
176 |
N/A |
INTRINSIC |
|
KISc
|
211 |
549 |
2.34e-134 |
SMART |
|
low complexity region
|
588 |
603 |
N/A |
INTRINSIC |
|
coiled coil region
|
640 |
664 |
N/A |
INTRINSIC |
|
| Meta Mutation Damage Score |
0.0898 |
| Coding Region Coverage |
- 1x: 99.3%
- 3x: 98.7%
- 10x: 97.4%
- 20x: 95.5%
|
| Validation Efficiency |
94% (51/54) |
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 50 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 1700086D15Rik |
A |
T |
11: 65,044,066 (GRCm39) |
|
probably benign |
Het |
| Abcf2 |
T |
C |
5: 24,778,421 (GRCm39) |
R246G |
probably damaging |
Het |
| Adamts19 |
G |
T |
18: 59,185,654 (GRCm39) |
C1176F |
probably damaging |
Het |
| Adh7 |
G |
A |
3: 137,932,090 (GRCm39) |
V235I |
probably benign |
Het |
| Aoc1l1 |
C |
T |
6: 48,955,471 (GRCm39) |
P694S |
probably damaging |
Het |
| Caprin2 |
G |
C |
6: 148,744,666 (GRCm39) |
P701A |
probably damaging |
Het |
| Casp7 |
T |
C |
19: 56,422,315 (GRCm39) |
V110A |
possibly damaging |
Het |
| Cd1d2 |
A |
T |
3: 86,894,549 (GRCm39) |
M106L |
probably benign |
Het |
| Cntnap2 |
C |
T |
6: 46,506,749 (GRCm39) |
|
probably benign |
Het |
| Cpm |
A |
G |
10: 117,507,638 (GRCm39) |
I252V |
probably benign |
Het |
| Dnaaf2 |
A |
C |
12: 69,239,627 (GRCm39) |
I631M |
probably damaging |
Het |
| Fads2b |
T |
G |
2: 85,314,538 (GRCm39) |
|
probably null |
Het |
| Fam117b |
A |
G |
1: 60,009,631 (GRCm39) |
|
probably null |
Het |
| Fbxw22 |
T |
C |
9: 109,214,064 (GRCm39) |
M251V |
probably benign |
Het |
| Fignl1 |
T |
C |
11: 11,752,011 (GRCm39) |
|
probably null |
Het |
| Foxp1 |
G |
A |
6: 98,992,423 (GRCm39) |
L156F |
probably damaging |
Het |
| Gdap1 |
A |
T |
1: 17,231,650 (GRCm39) |
M332L |
probably benign |
Het |
| H2-M3 |
T |
C |
17: 37,583,334 (GRCm39) |
F265S |
probably damaging |
Het |
| Il1rl1 |
C |
T |
1: 40,501,103 (GRCm39) |
A493V |
probably benign |
Het |
| Iqce |
A |
G |
5: 140,651,895 (GRCm39) |
S359P |
probably damaging |
Het |
| Luzp1 |
T |
C |
4: 136,268,340 (GRCm39) |
S188P |
probably damaging |
Het |
| Med13l |
T |
A |
5: 118,866,707 (GRCm39) |
L587Q |
probably damaging |
Het |
| Mocs2 |
A |
G |
13: 114,962,692 (GRCm39) |
|
probably null |
Het |
| Mtnr1b |
T |
C |
9: 15,774,459 (GRCm39) |
Y200C |
probably damaging |
Het |
| Nalcn |
C |
T |
14: 123,702,138 (GRCm39) |
V458I |
possibly damaging |
Het |
| Nbea |
C |
T |
3: 55,912,719 (GRCm39) |
V1023I |
probably benign |
Het |
| Nbeal1 |
T |
A |
1: 60,331,006 (GRCm39) |
V2205D |
probably damaging |
Het |
| Nfe2l3 |
A |
G |
6: 51,434,226 (GRCm39) |
D262G |
probably damaging |
Het |
| Nsfl1c |
T |
C |
2: 151,346,085 (GRCm39) |
Y169H |
probably damaging |
Het |
| Pcdhac1 |
A |
T |
18: 37,223,372 (GRCm39) |
R62* |
probably null |
Het |
| Pcdhga1 |
A |
G |
18: 37,796,714 (GRCm39) |
T573A |
probably benign |
Het |
| Plin4 |
C |
T |
17: 56,409,470 (GRCm39) |
C1276Y |
possibly damaging |
Het |
| Ppp6r1 |
C |
A |
7: 4,645,207 (GRCm39) |
R220L |
possibly damaging |
Het |
| Ptprz1 |
T |
G |
6: 23,000,235 (GRCm39) |
V775G |
probably damaging |
Het |
| Sh3bp5 |
C |
A |
14: 31,099,452 (GRCm39) |
R265L |
probably benign |
Het |
| Slc17a6 |
A |
G |
7: 51,275,249 (GRCm39) |
T103A |
possibly damaging |
Het |
| Spock1 |
A |
T |
13: 57,577,217 (GRCm39) |
L404Q |
probably benign |
Het |
| Stradb |
C |
A |
1: 59,031,903 (GRCm39) |
H272N |
probably benign |
Het |
| Strn3 |
A |
G |
12: 51,680,410 (GRCm39) |
S397P |
probably benign |
Het |
| Synpo2l |
C |
T |
14: 20,716,198 (GRCm39) |
R126H |
possibly damaging |
Het |
| Tas2r104 |
A |
G |
6: 131,662,236 (GRCm39) |
Y158H |
probably benign |
Het |
| Tiparp |
T |
A |
3: 65,438,771 (GRCm39) |
I29N |
possibly damaging |
Het |
| Tnpo1 |
G |
A |
13: 98,996,349 (GRCm39) |
T484M |
probably benign |
Het |
| Tsc22d4 |
A |
G |
5: 137,756,805 (GRCm39) |
I78V |
probably benign |
Het |
| Ugt2b1 |
T |
C |
5: 87,067,265 (GRCm39) |
Y386C |
probably benign |
Het |
| Ugt2b38 |
A |
G |
5: 87,571,954 (GRCm39) |
V26A |
probably damaging |
Het |
| Vmn2r116 |
G |
A |
17: 23,620,378 (GRCm39) |
C704Y |
probably damaging |
Het |
| Vmn2r97 |
T |
A |
17: 19,167,442 (GRCm39) |
Y565* |
probably null |
Het |
| Zfand2b |
T |
A |
1: 75,147,171 (GRCm39) |
|
probably null |
Het |
| Zzef1 |
C |
T |
11: 72,712,763 (GRCm39) |
Q228* |
probably null |
Het |
|
| Other mutations in Kif2b |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL00834:Kif2b
|
APN |
11 |
91,467,206 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL01459:Kif2b
|
APN |
11 |
91,467,849 (GRCm39) |
missense |
possibly damaging |
0.65 |
|
IGL01468:Kif2b
|
APN |
11 |
91,467,191 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02897:Kif2b
|
APN |
11 |
91,467,045 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0076:Kif2b
|
UTSW |
11 |
91,466,735 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0488:Kif2b
|
UTSW |
11 |
91,467,798 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0524:Kif2b
|
UTSW |
11 |
91,466,550 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0549:Kif2b
|
UTSW |
11 |
91,467,410 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0893:Kif2b
|
UTSW |
11 |
91,466,420 (GRCm39) |
missense |
probably benign |
0.16 |
|
R1677:Kif2b
|
UTSW |
11 |
91,466,798 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2025:Kif2b
|
UTSW |
11 |
91,468,172 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R2185:Kif2b
|
UTSW |
11 |
91,467,797 (GRCm39) |
frame shift |
probably null |
|
|
R2290:Kif2b
|
UTSW |
11 |
91,466,522 (GRCm39) |
missense |
probably benign |
0.00 |
|
R4697:Kif2b
|
UTSW |
11 |
91,467,672 (GRCm39) |
missense |
probably benign |
0.01 |
|
R4785:Kif2b
|
UTSW |
11 |
91,467,254 (GRCm39) |
missense |
probably benign |
0.07 |
|
R5429:Kif2b
|
UTSW |
11 |
91,468,055 (GRCm39) |
missense |
probably benign |
0.03 |
|
R5555:Kif2b
|
UTSW |
11 |
91,466,286 (GRCm39) |
missense |
probably benign |
0.00 |
|
R5652:Kif2b
|
UTSW |
11 |
91,466,656 (GRCm39) |
missense |
possibly damaging |
0.86 |
|
R6101:Kif2b
|
UTSW |
11 |
91,466,814 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6105:Kif2b
|
UTSW |
11 |
91,466,814 (GRCm39) |
missense |
probably benign |
0.00 |
|
R6450:Kif2b
|
UTSW |
11 |
91,467,192 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6862:Kif2b
|
UTSW |
11 |
91,466,741 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7097:Kif2b
|
UTSW |
11 |
91,467,650 (GRCm39) |
missense |
probably benign |
0.00 |
|
R7189:Kif2b
|
UTSW |
11 |
91,467,963 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7507:Kif2b
|
UTSW |
11 |
91,468,269 (GRCm39) |
missense |
probably benign |
|
|
R7742:Kif2b
|
UTSW |
11 |
91,467,411 (GRCm39) |
missense |
possibly damaging |
0.85 |
|
R7818:Kif2b
|
UTSW |
11 |
91,466,952 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7820:Kif2b
|
UTSW |
11 |
91,468,100 (GRCm39) |
missense |
probably benign |
0.01 |
|
R7946:Kif2b
|
UTSW |
11 |
91,466,571 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8378:Kif2b
|
UTSW |
11 |
91,467,201 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R8442:Kif2b
|
UTSW |
11 |
91,467,140 (GRCm39) |
missense |
possibly damaging |
0.54 |
|
R8925:Kif2b
|
UTSW |
11 |
91,468,023 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8927:Kif2b
|
UTSW |
11 |
91,468,023 (GRCm39) |
missense |
probably benign |
0.00 |
|
R8969:Kif2b
|
UTSW |
11 |
91,468,019 (GRCm39) |
missense |
probably benign |
0.00 |
|
R9002:Kif2b
|
UTSW |
11 |
91,467,053 (GRCm39) |
missense |
probably benign |
0.30 |
|
R9028:Kif2b
|
UTSW |
11 |
91,468,011 (GRCm39) |
missense |
probably benign |
|
|
R9039:Kif2b
|
UTSW |
11 |
91,467,131 (GRCm39) |
missense |
possibly damaging |
0.91 |
|
R9063:Kif2b
|
UTSW |
11 |
91,466,654 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R9114:Kif2b
|
UTSW |
11 |
91,466,538 (GRCm39) |
missense |
possibly damaging |
0.77 |
|
R9279:Kif2b
|
UTSW |
11 |
91,467,975 (GRCm39) |
missense |
probably benign |
0.01 |
|
Z1176:Kif2b
|
UTSW |
11 |
91,467,090 (GRCm39) |
nonsense |
probably null |
|
|
| Predicted Primers |
PCR Primer
(F):5'- TCATCAGGGTTTGGCTGTCC -3'
(R):5'- GTAACTCCACTCACCATGGC -3'
Sequencing Primer
(F):5'- TTGGCTGTCCCCTGAGG -3'
(R):5'- TGGCCAGCCAGTTCTGC -3'
|
| Posted On |
2016-11-21 |
Incidental Mutation