Incidental Mutation 'R5812:Cxxc5'
ID447581
Institutional Source Beutler Lab
Gene Symbol Cxxc5
Ensembl Gene ENSMUSG00000046668
Gene NameCXXC finger 5
Synonyms
Accession Numbers
Is this an essential gene? Possibly non essential (E-score: 0.482) question?
Stock #R5812 (G1)
Quality Score171
Status Not validated
Chromosome18
Chromosomal Location35829818-35861687 bp(+) (GRCm38)
Type of Mutationmissense
DNA Base Change (assembly) T to A at 35859056 bp
ZygosityHeterozygous
Amino Acid Change Valine to Glutamic Acid at position 170 (V170E)
Ref Sequence ENSEMBL: ENSMUSP00000054307 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000060722]
Predicted Effect probably damaging
Transcript: ENSMUST00000060722
AA Change: V170E

PolyPhen 2 Score 0.977 (Sensitivity: 0.76; Specificity: 0.96)
SMART Domains Protein: ENSMUSP00000054307
Gene: ENSMUSG00000046668
AA Change: V170E

DomainStartEndE-ValueType
low complexity region 2 27 N/A INTRINSIC
low complexity region 36 55 N/A INTRINSIC
low complexity region 82 95 N/A INTRINSIC
low complexity region 98 111 N/A INTRINSIC
Pfam:zf-CXXC 250 291 3.4e-10 PFAM
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.6%
  • 10x: 97.3%
  • 20x: 95.4%
Validation Efficiency
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene is a retinoid-inducible nuclear protein containing a CXXC-type zinc finger motif. The encoded protein is involved in myelopoiesis, is required for DNA damage-induced p53 activation, regulates the differentiation of C2C12 myoblasts into myocytes, and negatively regulates cutaneous wound healing. Several transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Nov 2015]
PHENOTYPE: Mice homozygous for a null allele exhibit an increase in bone mass, bone mineral density, osteocyte dendrite formation, and bone formation rate. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 41 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
4930579F01Rik A G 3: 138,176,538 S9P probably damaging Het
Acsl5 G A 19: 55,294,836 V615I probably benign Het
Ankk1 T C 9: 49,426,853 K47E probably benign Het
Ankrd11 A T 8: 122,893,805 probably null Het
Bcl9l T C 9: 44,506,644 V593A probably benign Het
Cadps T C 14: 12,376,685 I1271V probably benign Het
Ccdc125 T C 13: 100,684,304 W152R probably damaging Het
Cep192 T C 18: 67,851,737 V1606A possibly damaging Het
Csgalnact1 T C 8: 68,401,384 N255S probably benign Het
Defb6 C T 8: 19,228,094 R61C possibly damaging Het
Dnah10 T A 5: 124,747,746 N655K probably benign Het
Fry G A 5: 150,399,671 A1096T probably damaging Het
Gli1 C T 10: 127,337,415 G125S probably damaging Het
Gm5538 T A 3: 59,747,272 Y176N probably damaging Het
Igkv14-126 A T 6: 67,896,440 I51F possibly damaging Het
Itgb4 C T 11: 115,984,157 R447W probably benign Het
Jtb T C 3: 90,233,977 S87P probably benign Het
Kdm6b A T 11: 69,405,929 I504N probably damaging Het
Lin9 T A 1: 180,669,198 L351I probably benign Het
Map2k4 A G 11: 65,735,205 I136T probably damaging Het
March4 T C 1: 72,428,917 T319A probably benign Het
Nr2e3 TCCATCGGAGTGTTCCC TC 9: 59,943,418 probably benign Het
Nt5e T C 9: 88,369,055 V459A probably damaging Het
Ogdhl A G 14: 32,332,865 K257E probably damaging Het
Olfr1 AGCGGTCGTAGGC AGC 11: 73,395,654 probably null Het
Olfr117 A G 17: 37,659,739 L198P probably damaging Het
Osmr A T 15: 6,837,059 V378D probably damaging Het
Pcdhb18 G A 18: 37,490,484 R289Q probably benign Het
Pdzd7 G T 19: 45,036,871 T395K probably damaging Het
Rasgef1c A G 11: 49,957,143 D35G probably benign Het
Rbm19 T C 5: 120,141,577 F770L probably damaging Het
Rit2 C A 18: 30,975,461 C157F probably damaging Het
Slc22a22 A G 15: 57,256,473 probably null Het
Slc8b1 T C 5: 120,513,338 probably null Het
Speer2 C A 16: 69,858,895 R14S possibly damaging Het
Tas2r105 C A 6: 131,686,873 L197F possibly damaging Het
Tmprss11b T A 5: 86,665,098 H113L possibly damaging Het
Ttbk2 G A 2: 120,822,559 P64S probably damaging Het
Urb1 A T 16: 90,804,537 H115Q probably damaging Het
Vps13c T A 9: 67,982,495 probably benign Het
Zbtb39 T A 10: 127,741,560 M1K probably null Het
Other mutations in Cxxc5
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00158:Cxxc5 APN 18 35860692 makesense probably null
R0625:Cxxc5 UTSW 18 35858589 missense unknown
R1538:Cxxc5 UTSW 18 35858569 missense unknown
R1891:Cxxc5 UTSW 18 35859265 missense possibly damaging 0.77
R6622:Cxxc5 UTSW 18 35859319 missense possibly damaging 0.93
R6908:Cxxc5 UTSW 18 35859215 missense probably damaging 0.99
Predicted Primers PCR Primer
(F):5'- CTATTGGCCAATGGTCATGAC -3'
(R):5'- ACAACTGCTGCACTGCTCAC -3'

Sequencing Primer
(F):5'- TCATGACCTGGCTGCGG -3'
(R):5'- TGCTCACAGTTGATGCGC -3'
Posted On2016-12-15