Incidental Mutation 'R5809:Plcb1'
ID 448886
Institutional Source Beutler Lab
Gene Symbol Plcb1
Ensembl Gene ENSMUSG00000051177
Gene Name phospholipase C, beta 1
Synonyms 3110043I21Rik
MMRRC Submission 043394-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.226) question?
Stock # R5809 (G1)
Quality Score 225
Status Validated
Chromosome 2
Chromosomal Location 134786067-135475258 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) T to C at 135262244 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Tyrosine to Histidine at position 278 (Y278H)
Ref Sequence ENSEMBL: ENSMUSP00000118756 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000070724] [ENSMUST00000110116] [ENSMUST00000131552]
AlphaFold Q9Z1B3
Predicted Effect possibly damaging
Transcript: ENSMUST00000070724
AA Change: Y278H

PolyPhen 2 Score 0.830 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000064844
Gene: ENSMUSG00000051177
AA Change: Y278H

DomainStartEndE-ValueType
Pfam:EF-hand_like 224 315 2.2e-26 PFAM
PLCXc 316 467 2.85e-74 SMART
low complexity region 491 501 N/A INTRINSIC
PLCYc 540 656 2e-69 SMART
C2 677 776 1.55e-12 SMART
low complexity region 871 885 N/A INTRINSIC
Pfam:DUF1154 903 946 1.3e-7 PFAM
low complexity region 967 984 N/A INTRINSIC
Pfam:PLC-beta_C 997 1155 1.9e-64 PFAM
low complexity region 1157 1168 N/A INTRINSIC
Predicted Effect possibly damaging
Transcript: ENSMUST00000110116
AA Change: Y278H

PolyPhen 2 Score 0.830 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000105743
Gene: ENSMUSG00000051177
AA Change: Y278H

DomainStartEndE-ValueType
Pfam:EF-hand_like 224 315 4.1e-26 PFAM
PLCXc 316 467 2.85e-74 SMART
low complexity region 491 501 N/A INTRINSIC
PLCYc 540 656 2e-69 SMART
C2 677 776 1.55e-12 SMART
low complexity region 871 885 N/A INTRINSIC
Pfam:DUF1154 903 946 1.1e-9 PFAM
low complexity region 967 984 N/A INTRINSIC
Pfam:PLC-beta_C 1003 1176 2.9e-61 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000129382
Predicted Effect possibly damaging
Transcript: ENSMUST00000131552
AA Change: Y278H

PolyPhen 2 Score 0.830 (Sensitivity: 0.84; Specificity: 0.93)
SMART Domains Protein: ENSMUSP00000118756
Gene: ENSMUSG00000051177
AA Change: Y278H

DomainStartEndE-ValueType
Pfam:EF-hand_like 224 315 3.9e-26 PFAM
PLCXc 316 467 2.85e-74 SMART
low complexity region 491 501 N/A INTRINSIC
PLCYc 540 656 2e-69 SMART
C2 677 776 1.55e-12 SMART
low complexity region 871 885 N/A INTRINSIC
Pfam:DUF1154 903 946 1e-9 PFAM
low complexity region 967 984 N/A INTRINSIC
Pfam:PLC-beta_C 1003 1148 8e-51 PFAM
low complexity region 1157 1168 N/A INTRINSIC
Predicted Effect probably benign
Transcript: ENSMUST00000201485
Meta Mutation Damage Score 0.6756 question?
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.8%
  • 10x: 97.5%
  • 20x: 95.9%
Validation Efficiency 99% (77/78)
MGI Phenotype FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] The protein encoded by this gene catalyzes the formation of inositol 1,4,5-trisphosphate and diacylglycerol from phosphatidylinositol 4,5-bisphosphate. This reaction uses calcium as a cofactor and plays an important role in the intracellular transduction of many extracellular signals. This gene is activated by two G-protein alpha subunits, alpha-q and alpha-11. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
PHENOTYPE: Homozygotes for a targeted null mutation exhibit spontaneous seizures and high mortality around 3 weeks of age. Mutant males show exhibit sperm with a reduced acrosome reaction rate and fertilizing capacity in vitro and decreased fertility in vivo. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 72 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
2810403A07Rik A G 3: 88,708,885 (GRCm38) R460G probably damaging Het
A230072I06Rik A G 8: 12,279,556 (GRCm38) S4G unknown Het
AA623943 T C 11: 94,813,002 (GRCm38) noncoding transcript Het
Abca13 T A 11: 9,293,692 (GRCm38) S1852T probably damaging Het
Ackr2 G A 9: 121,909,474 (GRCm38) C305Y probably damaging Het
Aebp1 T C 11: 5,870,257 (GRCm38) V411A probably benign Het
Akp3 G A 1: 87,126,548 (GRCm38) R269H probably benign Het
Alox15 C A 11: 70,350,882 (GRCm38) G58W probably damaging Het
Ankle2 A G 5: 110,237,990 (GRCm38) N369S probably damaging Het
Ankrd28 T A 14: 31,743,354 (GRCm38) I289L probably benign Het
Atp13a4 T A 16: 29,433,987 (GRCm38) T714S possibly damaging Het
Birc6 A C 17: 74,670,374 (GRCm38) N4388T probably damaging Het
Blm A T 7: 80,464,844 (GRCm38) L1159Q probably damaging Het
Caskin1 G A 17: 24,504,547 (GRCm38) V770I probably benign Het
Ccdc148 T A 2: 58,823,645 (GRCm38) H498L probably damaging Het
Cdh26 T A 2: 178,460,126 (GRCm38) Y179* probably null Het
Cela2a T A 4: 141,825,553 (GRCm38) T38S probably benign Het
Cep350 A T 1: 155,933,341 (GRCm38) N496K probably damaging Het
Cep89 A G 7: 35,417,726 (GRCm38) Y251C probably damaging Het
Cluh T C 11: 74,661,700 (GRCm38) S524P probably damaging Het
Cpeb4 T C 11: 31,872,801 (GRCm38) S172P probably damaging Het
Ctnnd2 T C 15: 30,847,377 (GRCm38) S705P probably damaging Het
D730048I06Rik C T 9: 35,789,001 (GRCm38) C96Y probably damaging Het
Dock2 T G 11: 34,262,445 (GRCm38) D1232A probably benign Het
Donson T C 16: 91,687,850 (GRCm38) N9S possibly damaging Het
Gdf9 T C 11: 53,433,554 (GRCm38) L50P probably benign Het
Gm10300 C T 4: 132,075,147 (GRCm38) probably benign Het
Gm8369 A G 19: 11,504,884 (GRCm38) probably benign Het
Gm8674 T A 13: 49,901,888 (GRCm38) noncoding transcript Het
Hepacam T A 9: 37,384,805 (GRCm38) S417R possibly damaging Het
Hibch T A 1: 52,853,700 (GRCm38) L23Q probably benign Het
Hmcn1 G A 1: 150,649,607 (GRCm38) R3389C probably damaging Het
Hsp90ab1 G T 17: 45,570,649 (GRCm38) probably benign Het
Hunk C A 16: 90,475,903 (GRCm38) T365K probably damaging Het
Il12a A T 3: 68,695,262 (GRCm38) probably benign Het
Ints13 A G 6: 146,576,349 (GRCm38) V34A probably benign Het
Intu A C 3: 40,679,590 (GRCm38) M418L probably damaging Het
Klra9 A G 6: 130,179,073 (GRCm38) S240P probably damaging Het
Mtpn C T 6: 35,512,290 (GRCm38) D100N probably benign Het
Ndrg1 A G 15: 66,930,850 (GRCm38) probably benign Het
Olfr181 T C 16: 58,926,497 (GRCm38) T25A probably benign Het
Olfr739 T C 14: 50,425,448 (GRCm38) *310Q probably null Het
Pax7 A G 4: 139,830,371 (GRCm38) S30P probably damaging Het
Pdcd11 A T 19: 47,093,808 (GRCm38) T54S probably benign Het
Pex19 T C 1: 172,130,739 (GRCm38) V95A probably damaging Het
Pkhd1l1 A G 15: 44,519,707 (GRCm38) I1121V probably benign Het
Pklr A T 3: 89,141,784 (GRCm38) I146F probably benign Het
Plcl1 T A 1: 55,696,001 (GRCm38) I167N probably damaging Het
Plekhh1 A T 12: 79,078,687 (GRCm38) I1241F probably benign Het
Plxnb2 G T 15: 89,167,571 (GRCm38) D148E possibly damaging Het
Pthlh T C 6: 147,257,247 (GRCm38) I72V probably damaging Het
Ptpru C T 4: 131,785,756 (GRCm38) R880Q probably benign Het
Rrp36 T C 17: 46,668,006 (GRCm38) K209E probably damaging Het
Scarb1 A G 5: 125,304,222 (GRCm38) V86A probably damaging Het
Sh2d7 A C 9: 54,539,576 (GRCm38) S37R probably benign Het
Slc13a2 A T 11: 78,397,821 (GRCm38) V543E probably damaging Het
Smarcal1 A G 1: 72,591,137 (GRCm38) T117A probably benign Het
Smok2a A G 17: 13,226,978 (GRCm38) R481G possibly damaging Het
Smr2 G A 5: 88,108,840 (GRCm38) A126T probably benign Het
Sspo G T 6: 48,460,045 (GRCm38) W1304C possibly damaging Het
Svep1 A G 4: 58,116,524 (GRCm38) S909P possibly damaging Het
Tchh A T 3: 93,445,573 (GRCm38) K773N unknown Het
Tmem156 T C 5: 65,075,607 (GRCm38) N140S possibly damaging Het
Tmem213 T C 6: 38,115,654 (GRCm38) I107T possibly damaging Het
Tpd52l2 A G 2: 181,511,579 (GRCm38) Y161C probably damaging Het
Trappc8 C T 18: 20,818,082 (GRCm38) A1436T probably benign Het
Ubr3 A G 2: 69,965,511 (GRCm38) Y933C possibly damaging Het
Ufm1 A T 3: 53,857,882 (GRCm38) probably benign Het
Wdr27 A T 17: 14,883,669 (GRCm38) L725Q probably damaging Het
Zdbf2 A G 1: 63,305,876 (GRCm38) D1138G possibly damaging Het
Zkscan16 G A 4: 58,946,481 (GRCm38) V119M probably damaging Het
Zmat5 A G 11: 4,722,431 (GRCm38) D16G probably damaging Het
Other mutations in Plcb1
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00510:Plcb1 APN 2 135,251,756 (GRCm38) missense possibly damaging 0.66
IGL01152:Plcb1 APN 2 134,813,659 (GRCm38) missense probably damaging 1.00
IGL01945:Plcb1 APN 2 135,220,791 (GRCm38) missense probably benign 0.03
IGL01999:Plcb1 APN 2 135,346,318 (GRCm38) missense probably damaging 1.00
IGL02109:Plcb1 APN 2 134,786,559 (GRCm38) missense probably damaging 1.00
IGL02153:Plcb1 APN 2 135,387,853 (GRCm38) missense probably benign 0.08
IGL02207:Plcb1 APN 2 135,387,171 (GRCm38) missense probably damaging 1.00
IGL02566:Plcb1 APN 2 135,472,263 (GRCm38) missense probably benign 0.17
IGL02590:Plcb1 APN 2 135,294,864 (GRCm38) missense probably benign 0.08
IGL02640:Plcb1 APN 2 135,220,859 (GRCm38) splice site probably benign
IGL02926:Plcb1 APN 2 135,364,762 (GRCm38) splice site probably benign
IGL03071:Plcb1 APN 2 135,387,802 (GRCm38) missense probably damaging 1.00
IGL03236:Plcb1 APN 2 135,346,306 (GRCm38) missense probably damaging 1.00
IGL03252:Plcb1 APN 2 135,370,428 (GRCm38) missense probably benign
IGL03387:Plcb1 APN 2 134,813,686 (GRCm38) splice site probably benign
BB001:Plcb1 UTSW 2 135,359,693 (GRCm38) missense probably benign 0.00
BB011:Plcb1 UTSW 2 135,359,693 (GRCm38) missense probably benign 0.00
R0024:Plcb1 UTSW 2 135,362,425 (GRCm38) missense probably benign 0.06
R0024:Plcb1 UTSW 2 135,362,425 (GRCm38) missense probably benign 0.06
R0053:Plcb1 UTSW 2 135,294,915 (GRCm38) missense probably benign 0.33
R0053:Plcb1 UTSW 2 135,294,915 (GRCm38) missense probably benign 0.33
R0308:Plcb1 UTSW 2 134,813,614 (GRCm38) missense probably benign 0.01
R0415:Plcb1 UTSW 2 135,337,499 (GRCm38) missense probably damaging 1.00
R0624:Plcb1 UTSW 2 135,294,911 (GRCm38) missense possibly damaging 0.81
R0898:Plcb1 UTSW 2 135,387,143 (GRCm38) missense possibly damaging 0.73
R1071:Plcb1 UTSW 2 135,325,657 (GRCm38) missense possibly damaging 0.64
R1615:Plcb1 UTSW 2 135,362,444 (GRCm38) splice site probably benign
R1617:Plcb1 UTSW 2 135,337,441 (GRCm38) missense probably damaging 1.00
R1785:Plcb1 UTSW 2 135,325,667 (GRCm38) nonsense probably null
R1866:Plcb1 UTSW 2 135,344,173 (GRCm38) missense probably benign 0.01
R1869:Plcb1 UTSW 2 135,311,014 (GRCm38) missense probably benign 0.02
R1902:Plcb1 UTSW 2 134,813,613 (GRCm38) missense possibly damaging 0.93
R1938:Plcb1 UTSW 2 135,386,302 (GRCm38) missense probably damaging 1.00
R2016:Plcb1 UTSW 2 135,362,420 (GRCm38) missense possibly damaging 0.94
R2017:Plcb1 UTSW 2 135,362,420 (GRCm38) missense possibly damaging 0.94
R2131:Plcb1 UTSW 2 135,325,667 (GRCm38) nonsense probably null
R2132:Plcb1 UTSW 2 135,325,667 (GRCm38) nonsense probably null
R2133:Plcb1 UTSW 2 135,325,667 (GRCm38) nonsense probably null
R2164:Plcb1 UTSW 2 135,346,330 (GRCm38) missense possibly damaging 0.87
R2419:Plcb1 UTSW 2 135,262,100 (GRCm38) splice site probably benign
R2429:Plcb1 UTSW 2 135,337,442 (GRCm38) missense probably damaging 0.99
R2508:Plcb1 UTSW 2 135,260,508 (GRCm38) missense probably benign 0.27
R3161:Plcb1 UTSW 2 135,335,482 (GRCm38) missense probably benign 0.03
R3870:Plcb1 UTSW 2 135,325,671 (GRCm38) missense probably damaging 0.99
R4191:Plcb1 UTSW 2 135,345,090 (GRCm38) missense probably damaging 1.00
R4239:Plcb1 UTSW 2 135,344,158 (GRCm38) missense probably damaging 0.99
R4552:Plcb1 UTSW 2 135,335,493 (GRCm38) missense probably benign 0.44
R4553:Plcb1 UTSW 2 135,335,493 (GRCm38) missense probably benign 0.44
R4720:Plcb1 UTSW 2 135,251,747 (GRCm38) missense possibly damaging 0.70
R4946:Plcb1 UTSW 2 135,345,095 (GRCm38) missense probably benign 0.01
R5012:Plcb1 UTSW 2 135,333,400 (GRCm38) missense probably null 0.97
R5151:Plcb1 UTSW 2 135,262,245 (GRCm38) missense probably benign 0.28
R5320:Plcb1 UTSW 2 135,252,776 (GRCm38) missense possibly damaging 0.56
R5415:Plcb1 UTSW 2 135,347,402 (GRCm38) missense possibly damaging 0.67
R5523:Plcb1 UTSW 2 135,260,566 (GRCm38) missense probably benign 0.08
R5568:Plcb1 UTSW 2 135,370,593 (GRCm38) missense probably damaging 1.00
R5688:Plcb1 UTSW 2 135,335,480 (GRCm38) missense probably benign 0.06
R6237:Plcb1 UTSW 2 135,370,566 (GRCm38) missense possibly damaging 0.94
R6315:Plcb1 UTSW 2 135,346,341 (GRCm38) missense probably benign 0.00
R6478:Plcb1 UTSW 2 135,335,451 (GRCm38) missense probably damaging 1.00
R6531:Plcb1 UTSW 2 135,325,802 (GRCm38) critical splice donor site probably null
R6683:Plcb1 UTSW 2 134,786,593 (GRCm38) missense probably benign 0.32
R6760:Plcb1 UTSW 2 135,472,060 (GRCm38) missense possibly damaging 0.50
R6947:Plcb1 UTSW 2 135,386,155 (GRCm38) missense probably benign 0.08
R6976:Plcb1 UTSW 2 135,262,239 (GRCm38) missense possibly damaging 0.75
R7379:Plcb1 UTSW 2 135,370,510 (GRCm38) missense probably benign 0.45
R7473:Plcb1 UTSW 2 135,344,276 (GRCm38) missense probably damaging 0.98
R7492:Plcb1 UTSW 2 135,251,764 (GRCm38) nonsense probably null
R7498:Plcb1 UTSW 2 135,262,234 (GRCm38) missense probably damaging 0.99
R7498:Plcb1 UTSW 2 135,262,233 (GRCm38) nonsense probably null
R7777:Plcb1 UTSW 2 135,220,757 (GRCm38) missense possibly damaging 0.51
R7924:Plcb1 UTSW 2 135,359,693 (GRCm38) missense probably benign 0.00
R8061:Plcb1 UTSW 2 135,346,396 (GRCm38) missense probably benign
R8099:Plcb1 UTSW 2 135,251,734 (GRCm38) missense possibly damaging 0.68
R8299:Plcb1 UTSW 2 135,335,476 (GRCm38) missense probably damaging 1.00
R8394:Plcb1 UTSW 2 135,317,790 (GRCm38) missense probably damaging 1.00
R8439:Plcb1 UTSW 2 135,250,052 (GRCm38) critical splice donor site probably null
R8549:Plcb1 UTSW 2 135,364,933 (GRCm38) missense probably benign 0.00
R8693:Plcb1 UTSW 2 135,252,776 (GRCm38) missense probably benign 0.00
R8750:Plcb1 UTSW 2 135,335,449 (GRCm38) missense probably damaging 1.00
R8817:Plcb1 UTSW 2 135,333,509 (GRCm38) intron probably benign
R8950:Plcb1 UTSW 2 135,337,519 (GRCm38) missense probably damaging 1.00
R9146:Plcb1 UTSW 2 135,340,695 (GRCm38) missense probably damaging 1.00
R9301:Plcb1 UTSW 2 135,325,690 (GRCm38) missense possibly damaging 0.96
R9311:Plcb1 UTSW 2 135,347,465 (GRCm38) missense probably benign 0.00
R9459:Plcb1 UTSW 2 135,322,638 (GRCm38) missense probably benign 0.03
S24628:Plcb1 UTSW 2 135,337,499 (GRCm38) missense probably damaging 1.00
X0025:Plcb1 UTSW 2 135,345,054 (GRCm38) missense possibly damaging 0.87
Z1088:Plcb1 UTSW 2 135,220,846 (GRCm38) missense probably benign 0.04
Predicted Primers PCR Primer
(F):5'- AAGTTGTGGAACAGACTGTGATTTC -3'
(R):5'- TGGCTTGCACCACAAACAG -3'

Sequencing Primer
(F):5'- GGAACAGACTGTGATTTCTTCTC -3'
(R):5'- GGCTTGCACCACAAACAGAACTC -3'
Posted On 2016-12-15