Mutagenetix > Incidental Mutation

Incidental Mutation 'R5842:Eea1'

450500

Institutional Source

Beutler Lab

Gene Symbol

Eea1

Ensembl Gene

ENSMUSG00000036499

Gene Name

early endosome antigen 1

Synonyms

ZFYVE2, A430109M19Rik, B230358H09Rik

MMRRC Submission

043223-MU

Accession Numbers

Essential gene?

Possibly non essential (E-score: 0.293) question?

Stock #

R5842 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

95776525-95881380 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to G at 95853986 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Aspartic acid to Glycine at position 548 (D548G)

Ref Sequence

ENSEMBL: ENSMUSP00000061493 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000053484] [ENSMUST00000218291]

AlphaFold

Q8BL66

Predicted Effect

probably damaging
Transcript: ENSMUST00000053484
AA Change: D548G

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)

SMART Domains

Protein: ENSMUSP00000061493
Gene: ENSMUSG00000036499
AA Change: D548G

Domain	Start	End	E-Value	Type
ZnF_C2H2	41	64	2.2e-2	SMART
low complexity region	98	123	N/A	INTRINSIC
low complexity region	135	148	N/A	INTRINSIC
low complexity region	389	408	N/A	INTRINSIC
low complexity region	480	500	N/A	INTRINSIC
low complexity region	573	585	N/A	INTRINSIC
low complexity region	616	630	N/A	INTRINSIC
low complexity region	645	660	N/A	INTRINSIC
low complexity region	748	760	N/A	INTRINSIC
low complexity region	909	924	N/A	INTRINSIC
low complexity region	947	958	N/A	INTRINSIC
low complexity region	996	1010	N/A	INTRINSIC
low complexity region	1165	1176	N/A	INTRINSIC
low complexity region	1198	1217	N/A	INTRINSIC
FYVE	1344	1411	1.99e-28	SMART

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000218088

Predicted Effect

probably benign
Transcript: ENSMUST00000218291

Coding Region Coverage

1x: 99.8%
3x: 99.4%
10x: 97.1%
20x: 90.3%

Validation Efficiency

Allele List at MGI

Other mutations in this stock

Total: 39 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Alpk1	G	A	3: 127,474,618 (GRCm39)	H462Y	probably damaging	Het
Atp12a	T	C	14: 56,615,747 (GRCm39)	I503T	probably damaging	Het
Bmp6	T	A	13: 38,530,543 (GRCm39)	V212D	probably damaging	Het
Col7a1	A	G	9: 108,794,883 (GRCm39)	D1479G	unknown	Het
Eif5a2	T	C	3: 28,848,546 (GRCm39)	V135A	probably benign	Het
Eml2	G	A	7: 18,935,088 (GRCm39)	V432I	probably damaging	Het
Fstl5	T	G	3: 76,229,590 (GRCm39)	N130K	possibly damaging	Het
Gatm	T	C	2: 122,434,108 (GRCm39)	I147V	probably benign	Het
Jakmip1	C	T	5: 37,264,612 (GRCm39)	R418C	probably damaging	Het
Kmt2d	G	A	15: 98,749,990 (GRCm39)		probably benign	Het
Matn2	A	T	15: 34,399,202 (GRCm39)	D363V	probably damaging	Het
Mov10	G	A	3: 104,706,695 (GRCm39)		probably benign	Het
Mtpn	C	T	6: 35,489,225 (GRCm39)	D100N	probably benign	Het
Nbas	T	C	12: 13,319,267 (GRCm39)		probably null	Het
Nlgn1	A	T	3: 26,187,892 (GRCm39)		probably null	Het
Nnt	T	A	13: 119,531,283 (GRCm39)	I155F	probably damaging	Het
Or5p80	A	G	7: 108,229,859 (GRCm39)	Y220C	probably benign	Het
Pacc1	G	T	1: 191,078,986 (GRCm39)	C223F	probably damaging	Het
Parp9	A	G	16: 35,763,778 (GRCm39)	I19V	possibly damaging	Het
Pcdha11	T	A	18: 37,144,337 (GRCm39)	S143T	possibly damaging	Het
Pdzph1	T	G	17: 59,281,407 (GRCm39)	S292R	possibly damaging	Het
Pmvk	T	A	3: 89,374,927 (GRCm39)	V108D	probably damaging	Het
Rc3h2	T	C	2: 37,268,383 (GRCm39)	T916A	possibly damaging	Het
Slc23a1	T	A	18: 35,755,935 (GRCm39)	I393F	probably damaging	Het
Slc4a7	T	A	14: 14,778,866 (GRCm38)	M925K	probably damaging	Het
Spag17	A	G	3: 99,846,566 (GRCm39)	D30G	possibly damaging	Het
Syde2	A	G	3: 145,704,775 (GRCm39)	I576V	probably benign	Het
Tgm2	C	T	2: 157,985,001 (GRCm39)	R35H	probably damaging	Het
Tiam1	A	G	16: 89,652,887 (GRCm39)	V745A	probably benign	Het
Timeless	T	C	10: 128,083,328 (GRCm39)		probably null	Het
Trp53tg5	T	C	2: 164,313,289 (GRCm39)	K129E	possibly damaging	Het
Ttc6	T	C	12: 57,783,802 (GRCm39)	Y1754H	probably damaging	Het
Ube4b	G	T	4: 149,415,887 (GRCm39)	T1069N	probably benign	Het
Ugcg	C	T	4: 59,219,545 (GRCm39)	S294L	possibly damaging	Het
Vgll2	T	C	10: 51,901,388 (GRCm39)	L106P	probably damaging	Het
Vsig10l	T	A	7: 43,118,396 (GRCm39)	V798E	probably benign	Het
Wdr73	A	T	7: 80,541,458 (GRCm39)	H361Q	probably damaging	Het
Xrcc3	A	T	12: 111,770,964 (GRCm39)	F322I	possibly damaging	Het
Ypel1	T	C	16: 16,912,851 (GRCm39)	T26A	possibly damaging	Het

Other mutations in Eea1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01531:Eea1	APN	10	95,867,539 (GRCm39)	missense	probably damaging	0.99
IGL01645:Eea1	APN	10	95,825,451 (GRCm39)	missense	probably damaging	1.00
IGL01646:Eea1	APN	10	95,832,877 (GRCm39)	missense	probably damaging	0.99
IGL01870:Eea1	APN	10	95,809,848 (GRCm39)	missense	probably damaging	1.00
IGL02074:Eea1	APN	10	95,873,349 (GRCm39)	missense	probably damaging	1.00
IGL02229:Eea1	APN	10	95,854,046 (GRCm39)	missense	probably damaging	1.00
IGL02885:Eea1	APN	10	95,877,346 (GRCm39)	missense	probably benign	0.04
IGL02971:Eea1	APN	10	95,877,389 (GRCm39)	missense	probably benign	0.37
IGL03223:Eea1	APN	10	95,875,473 (GRCm39)	missense	probably damaging	1.00
IGL03355:Eea1	APN	10	95,878,074 (GRCm39)	utr 3 prime	probably benign
prom	UTSW	10	95,831,432 (GRCm39)	missense	probably benign	0.02
R4876_eea1_897	UTSW	10	95,831,475 (GRCm39)	missense	probably benign	0.07
Senior	UTSW	10	95,846,899 (GRCm39)	missense	probably benign
Slump	UTSW	10	95,872,495 (GRCm39)	missense	probably benign	0.00
R0189:Eea1	UTSW	10	95,831,444 (GRCm39)	missense	possibly damaging	0.86
R0374:Eea1	UTSW	10	95,875,634 (GRCm39)	splice site	probably benign
R0655:Eea1	UTSW	10	95,831,460 (GRCm39)	missense	probably benign	0.00
R0883:Eea1	UTSW	10	95,857,529 (GRCm39)	missense	possibly damaging	0.63
R1219:Eea1	UTSW	10	95,846,623 (GRCm39)	splice site	probably benign
R1344:Eea1	UTSW	10	95,830,861 (GRCm39)	critical splice donor site	probably null
R1768:Eea1	UTSW	10	95,832,822 (GRCm39)	missense	probably damaging	1.00
R1887:Eea1	UTSW	10	95,854,073 (GRCm39)	critical splice donor site	probably null
R2224:Eea1	UTSW	10	95,855,874 (GRCm39)	missense	probably damaging	0.99
R2927:Eea1	UTSW	10	95,849,220 (GRCm39)	missense	probably benign	0.00
R3922:Eea1	UTSW	10	95,872,495 (GRCm39)	missense	probably benign	0.00
R3950:Eea1	UTSW	10	95,877,996 (GRCm39)	missense	probably damaging	1.00
R4502:Eea1	UTSW	10	95,875,427 (GRCm39)	missense	probably benign	0.14
R4647:Eea1	UTSW	10	95,864,255 (GRCm39)	missense	probably benign
R4876:Eea1	UTSW	10	95,831,475 (GRCm39)	missense	probably benign	0.07
R5009:Eea1	UTSW	10	95,846,883 (GRCm39)	missense	probably benign
R5018:Eea1	UTSW	10	95,846,899 (GRCm39)	missense	probably benign
R5490:Eea1	UTSW	10	95,861,916 (GRCm39)	missense	probably benign	0.41
R5588:Eea1	UTSW	10	95,859,772 (GRCm39)	missense	probably benign	0.01
R5791:Eea1	UTSW	10	95,855,857 (GRCm39)	missense	probably benign	0.24
R5799:Eea1	UTSW	10	95,838,810 (GRCm39)	missense	possibly damaging	0.81
R6332:Eea1	UTSW	10	95,877,335 (GRCm39)	missense	possibly damaging	0.79
R6376:Eea1	UTSW	10	95,874,660 (GRCm39)	missense	probably benign	0.01
R6468:Eea1	UTSW	10	95,864,274 (GRCm39)	missense	probably benign	0.14
R6740:Eea1	UTSW	10	95,859,855 (GRCm39)	missense	probably benign
R6889:Eea1	UTSW	10	95,873,340 (GRCm39)	missense	probably benign	0.14
R6904:Eea1	UTSW	10	95,838,741 (GRCm39)	splice site	probably null
R7269:Eea1	UTSW	10	95,854,000 (GRCm39)	missense	probably damaging	1.00
R7273:Eea1	UTSW	10	95,825,493 (GRCm39)	missense	probably benign	0.00
R7398:Eea1	UTSW	10	95,831,493 (GRCm39)	missense	probably benign
R7400:Eea1	UTSW	10	95,831,432 (GRCm39)	missense	probably benign	0.02
R7537:Eea1	UTSW	10	95,830,767 (GRCm39)	nonsense	probably null
R7687:Eea1	UTSW	10	95,862,460 (GRCm39)	missense	probably benign
R7762:Eea1	UTSW	10	95,864,301 (GRCm39)	missense	probably benign	0.10
R8097:Eea1	UTSW	10	95,862,516 (GRCm39)	missense	probably benign	0.01
R8114:Eea1	UTSW	10	95,830,851 (GRCm39)	nonsense	probably null
R8803:Eea1	UTSW	10	95,859,853 (GRCm39)	missense	probably benign	0.13
R8853:Eea1	UTSW	10	95,857,517 (GRCm39)	missense
R8856:Eea1	UTSW	10	95,831,506 (GRCm39)	missense	probably benign	0.04
R8901:Eea1	UTSW	10	95,825,431 (GRCm39)	missense	probably damaging	1.00
R8907:Eea1	UTSW	10	95,826,274 (GRCm39)	missense	probably damaging	1.00
R8944:Eea1	UTSW	10	95,832,822 (GRCm39)	missense	probably damaging	1.00
R8960:Eea1	UTSW	10	95,864,381 (GRCm39)	missense	probably benign	0.00
R8966:Eea1	UTSW	10	95,832,901 (GRCm39)	missense	probably damaging	0.96
R8983:Eea1	UTSW	10	95,855,741 (GRCm39)	nonsense	probably null
R9069:Eea1	UTSW	10	95,831,510 (GRCm39)	missense	probably damaging	0.99
R9240:Eea1	UTSW	10	95,776,824 (GRCm39)	missense	probably benign	0.00
R9287:Eea1	UTSW	10	95,831,445 (GRCm39)	missense	probably damaging	1.00
R9661:Eea1	UTSW	10	95,862,742 (GRCm39)	missense	probably benign	0.00

Predicted Primers

PCR Primer
(F):5'- AGGTGGTGTAAATGGTTTTGCTAAAT -3'
(R):5'- GGTCAGGATCATGAATTTCCTTGA -3'

Sequencing Primer
(F):5'- GTAGGACTAATACTTTGAACAAT -3'
(R):5'- TTTCCTTGACAAACAGCTGCCATAG -3'

Posted On

2016-12-20