Incidental Mutation 'R5696:Or7a39'
ID 450683
Institutional Source Beutler Lab
Gene Symbol Or7a39
Ensembl Gene ENSMUSG00000062873
Gene Name olfactory receptor family 7 subfamily A member 39
Synonyms GA_x6K02T2QGN0-2932609-2931677, Olfr1355, MOR139-6
Accession Numbers
Essential gene? Probably non essential (E-score: 0.081) question?
Stock # R5696 (G1)
Quality Score 225
Status Not validated
Chromosome 10
Chromosomal Location 78711383-78715940 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to T at 78715919 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Serine at position 304 (R304S)
Ref Sequence ENSEMBL: ENSMUSP00000077517 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000078414]
AlphaFold Q7TQU9
Predicted Effect probably benign
Transcript: ENSMUST00000078414
AA Change: R304S

PolyPhen 2 Score 0.024 (Sensitivity: 0.95; Specificity: 0.81)
SMART Domains Protein: ENSMUSP00000077517
Gene: ENSMUSG00000062873
AA Change: R304S

DomainStartEndE-ValueType
Pfam:7tm_4 32 309 3.1e-48 PFAM
Pfam:7tm_1 42 291 1.1e-20 PFAM
Coding Region Coverage
  • 1x: 99.2%
  • 3x: 98.6%
  • 10x: 97.3%
  • 20x: 95.6%
Validation Efficiency
MGI Phenotype FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Allele List at MGI
Other mutations in this stock
Total: 73 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Adam8 G A 7: 139,569,159 (GRCm39) R186W probably benign Het
Afg3l2 A G 18: 67,540,529 (GRCm39) I660T probably damaging Het
Amtn T A 5: 88,532,944 (GRCm39) Y186* probably null Het
Atosa A G 9: 74,917,399 (GRCm39) E666G probably benign Het
Atrip A G 9: 108,894,569 (GRCm39) S453P possibly damaging Het
Bahcc1 T C 11: 120,164,813 (GRCm39) L840P probably damaging Het
Capn2 T C 1: 182,306,165 (GRCm39) E527G possibly damaging Het
Caprin2 A T 6: 148,779,316 (GRCm39) Y164N possibly damaging Het
Ccnh T A 13: 85,344,446 (GRCm39) probably null Het
Cdon G T 9: 35,403,162 (GRCm39) V1091F possibly damaging Het
Ceacam14 A G 7: 17,548,267 (GRCm39) Y119C probably damaging Het
Ces2h A G 8: 105,745,611 (GRCm39) K445E possibly damaging Het
Cfap46 A G 7: 139,191,947 (GRCm39) S2357P probably damaging Het
Commd4 A T 9: 57,063,499 (GRCm39) S86R possibly damaging Het
Cpsf6 A T 10: 117,196,934 (GRCm39) probably benign Het
Dag1 A T 9: 108,086,646 (GRCm39) V165E probably benign Het
Dmxl1 A T 18: 50,065,008 (GRCm39) K2618* probably null Het
Dnah17 A G 11: 117,991,882 (GRCm39) Y1229H probably benign Het
Endov T A 11: 119,382,625 (GRCm39) L24Q probably damaging Het
Fap C T 2: 62,332,803 (GRCm39) V717M probably damaging Het
Fbxl2 A G 9: 113,815,546 (GRCm39) L239P probably damaging Het
Fbxl5 A T 5: 43,916,182 (GRCm39) V367D possibly damaging Het
Fkbp10 G T 11: 100,314,352 (GRCm39) W384L probably damaging Het
Gbp8 C T 5: 105,166,682 (GRCm39) V216I possibly damaging Het
Gclm G A 3: 122,059,936 (GRCm39) A239T probably benign Het
Gm11569 C T 11: 99,689,556 (GRCm39) probably benign Het
Gnas C A 2: 174,141,468 (GRCm39) probably benign Het
Grb10 T A 11: 11,883,566 (GRCm39) N508I probably benign Het
Gykl1 T G 18: 52,827,267 (GRCm39) I158M probably benign Het
Ide G A 19: 37,295,420 (GRCm39) T214M unknown Het
Il12rb2 T A 6: 67,272,262 (GRCm39) Q341H possibly damaging Het
Ints1 T C 5: 139,740,744 (GRCm39) E1946G probably benign Het
Kdelr3 T C 15: 79,410,100 (GRCm39) probably null Het
Kif1b A C 4: 149,358,306 (GRCm39) probably null Het
Kri1 A G 9: 21,191,533 (GRCm39) I320T probably damaging Het
Krt9 TCCACTTCCTCCTCCATAGCTGCCCCCACTTCCTCCTCCATAGCTGCCCCCACTTCCTCCTCCATAGCTGCCCCCACTTCCTCCTCCATAGCTGCC TCCACTTCCTCCTCCATAGCTGCCCCCACTTCCTCCTCCATAGCTGCCCCCACTTCCTCCTCCATAGCTGCC 11: 100,079,903 (GRCm39) probably benign Het
Lin9 T C 1: 180,486,646 (GRCm39) S111P probably benign Het
Lpcat2b C A 5: 107,580,773 (GRCm39) P34Q probably damaging Het
Ltk T A 2: 119,590,080 (GRCm39) T49S probably benign Het
Map3k9 A T 12: 81,780,896 (GRCm39) H421Q probably benign Het
Mapkbp1 T A 2: 119,852,201 (GRCm39) probably null Het
Mcm4 A G 16: 15,443,434 (GRCm39) S830P probably damaging Het
Nek10 T A 14: 14,860,736 (GRCm38) probably null Het
Nlrp9b A T 7: 19,758,417 (GRCm39) R551S probably benign Het
Nol4l T C 2: 153,260,026 (GRCm39) T143A probably damaging Het
Or1r1 T C 11: 73,875,362 (GRCm39) H24R possibly damaging Het
Or51g1 T A 7: 102,633,748 (GRCm39) T208S probably benign Het
Or6z5 T C 7: 6,477,742 (GRCm39) probably null Het
Pde4dip G T 3: 97,616,806 (GRCm39) A1812D probably damaging Het
Plekhb1 C A 7: 100,305,960 (GRCm39) G26C probably damaging Het
Polr1a T A 6: 71,906,410 (GRCm39) F409I probably benign Het
Ptpn13 T A 5: 103,702,625 (GRCm39) M1197K probably benign Het
Qrich2 T C 11: 116,335,828 (GRCm39) I2114V probably damaging Het
Rbm27 T C 18: 42,450,731 (GRCm39) Y449H probably damaging Het
Rp1l1 A G 14: 64,267,195 (GRCm39) D927G probably damaging Het
Secisbp2 C A 13: 51,833,857 (GRCm39) Q666K probably damaging Het
Slc45a2 T C 15: 11,001,219 (GRCm39) I106T probably damaging Het
Slx4 G T 16: 3,797,831 (GRCm39) Q1518K probably damaging Het
Smim10l1 T C 6: 133,082,489 (GRCm39) F12S probably damaging Het
Son T C 16: 91,468,301 (GRCm39) V306A possibly damaging Het
Stab1 A G 14: 30,882,178 (GRCm39) S506P probably benign Het
Syne2 A C 12: 76,040,919 (GRCm39) D3859A probably benign Het
Tab1 T A 15: 80,032,930 (GRCm39) Y71* probably null Het
Tarbp1 A C 8: 127,174,079 (GRCm39) M909R probably damaging Het
Tex15 T G 8: 34,063,220 (GRCm39) S1157R probably benign Het
Tnni3 G A 7: 4,523,453 (GRCm39) T120I probably benign Het
Ttn T C 2: 76,747,888 (GRCm39) E4387G probably benign Het
Ugt3a1 G A 15: 9,361,534 (GRCm39) silent Het
Unc5d T C 8: 29,156,870 (GRCm39) I783V probably benign Het
Usp40 T C 1: 87,923,474 (GRCm39) T266A probably benign Het
Vmn2r59 C T 7: 41,695,468 (GRCm39) V315I probably benign Het
Zbtb48 G T 4: 152,105,067 (GRCm39) H532N probably damaging Het
Zfp1005 C T 2: 150,111,394 (GRCm39) H695Y possibly damaging Het
Other mutations in Or7a39
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01571:Or7a39 APN 10 78,715,671 (GRCm39) missense possibly damaging 0.95
IGL01773:Or7a39 APN 10 78,715,770 (GRCm39) missense possibly damaging 0.86
IGL02707:Or7a39 APN 10 78,715,759 (GRCm39) missense probably damaging 1.00
IGL03233:Or7a39 APN 10 78,715,406 (GRCm39) nonsense probably null
R1067:Or7a39 UTSW 10 78,715,517 (GRCm39) nonsense probably null
R1201:Or7a39 UTSW 10 78,715,311 (GRCm39) missense probably benign 0.12
R1956:Or7a39 UTSW 10 78,715,267 (GRCm39) missense probably benign 0.28
R1978:Or7a39 UTSW 10 78,715,114 (GRCm39) missense probably damaging 1.00
R2014:Or7a39 UTSW 10 78,715,222 (GRCm39) missense possibly damaging 0.94
R2015:Or7a39 UTSW 10 78,715,222 (GRCm39) missense possibly damaging 0.94
R2245:Or7a39 UTSW 10 78,715,765 (GRCm39) missense probably damaging 0.98
R3725:Or7a39 UTSW 10 78,715,766 (GRCm39) nonsense probably null
R4899:Or7a39 UTSW 10 78,715,041 (GRCm39) missense probably benign 0.32
R5982:Or7a39 UTSW 10 78,715,787 (GRCm39) nonsense probably null
R6448:Or7a39 UTSW 10 78,715,516 (GRCm39) missense possibly damaging 0.78
R7126:Or7a39 UTSW 10 78,715,411 (GRCm39) missense possibly damaging 0.50
R7385:Or7a39 UTSW 10 78,715,288 (GRCm39) missense probably damaging 0.97
R7807:Or7a39 UTSW 10 78,715,043 (GRCm39) missense probably benign
R7886:Or7a39 UTSW 10 78,715,657 (GRCm39) missense possibly damaging 0.59
R8313:Or7a39 UTSW 10 78,715,170 (GRCm39) missense probably benign 0.00
R8747:Or7a39 UTSW 10 78,715,155 (GRCm39) missense probably benign 0.14
R9507:Or7a39 UTSW 10 78,715,597 (GRCm39) missense probably benign 0.30
R9642:Or7a39 UTSW 10 78,715,395 (GRCm39) missense probably damaging 1.00
Z1177:Or7a39 UTSW 10 78,715,393 (GRCm39) missense possibly damaging 0.56
Z1177:Or7a39 UTSW 10 78,714,990 (GRCm39) critical splice acceptor site probably null
Predicted Primers PCR Primer
(F):5'- ACAAGGCATTTTCTACATGTGTCTC -3'
(R):5'- GGGATATCATAGGCACCCAC -3'

Sequencing Primer
(F):5'- GGCATTTTCTACATGTGTCTCTCACC -3'
(R):5'- AAGGGTGATGCATCCCTTGAATC -3'
Posted On 2017-01-03