Incidental Mutation 'R5876:Ttc9'
ID 455548
Institutional Source Beutler Lab
Gene Symbol Ttc9
Ensembl Gene ENSMUSG00000042734
Gene Name tetratricopeptide repeat domain 9
Synonyms 1700029M07Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.085) question?
Stock # R5876 (G1)
Quality Score 190
Status Not validated
Chromosome 12
Chromosomal Location 81631249-81667557 bp(+) (GRCm38)
Type of Mutation missense
DNA Base Change (assembly) G to T at 81631622 bp (GRCm38)
Zygosity Heterozygous
Amino Acid Change Arginine to Leucine at position 73 (R73L)
Ref Sequence ENSEMBL: ENSMUSP00000152038 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000036116] [ENSMUST00000218362]
AlphaFold Q3V038
Predicted Effect probably damaging
Transcript: ENSMUST00000036116
AA Change: R73L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
SMART Domains Protein: ENSMUSP00000048590
Gene: ENSMUSG00000042734
AA Change: R73L

low complexity region 16 38 N/A INTRINSIC
TPR 56 89 7.69e1 SMART
TPR 125 160 7.89e1 SMART
TPR 161 194 6.05e-4 SMART
Predicted Effect probably damaging
Transcript: ENSMUST00000218362
AA Change: R73L

PolyPhen 2 Score 1.000 (Sensitivity: 0.00; Specificity: 1.00)
Coding Region Coverage
  • 1x: 99.9%
  • 3x: 99.6%
  • 10x: 97.9%
  • 20x: 93.6%
Validation Efficiency
MGI Phenotype FUNCTION: This gene encodes a protein that contains three tetratricopeptide repeats. The human gene has been shown to be hormonally regulated in breast cancer cells and may play a role in cancer cell invasion and metastasis. [provided by RefSeq, Sep 2015]
PHENOTYPE: Homozygous KO adult females display increased body, thymus and spleen weights and improved mammary development and sensitivity to estrogen. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 57 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1700034E13Rik A G 18: 52,663,582 (GRCm38) D64G possibly damaging Het
Ano2 T A 6: 126,039,279 (GRCm38) M925K possibly damaging Het
Arnt2 T C 7: 84,347,512 (GRCm38) T69A probably damaging Het
Asap2 T A 12: 21,212,809 (GRCm38) N229K possibly damaging Het
Atp13a3 T A 16: 30,362,734 (GRCm38) N23Y probably benign Het
Cbr4 G A 8: 61,490,593 (GRCm38) G91R possibly damaging Het
Cdc27 A T 11: 104,515,418 (GRCm38) C624S probably benign Het
Cdc42bpg T A 19: 6,310,815 (GRCm38) I201N probably damaging Het
Cdh5 A G 8: 104,142,577 (GRCm38) Y645C probably damaging Het
Celsr2 C T 3: 108,413,943 (GRCm38) V518I probably damaging Het
Clca4b T C 3: 144,912,060 (GRCm38) T761A possibly damaging Het
Cpne4 C A 9: 104,925,770 (GRCm38) S204R probably damaging Het
Dcaf1 T C 9: 106,863,650 (GRCm38) W1279R probably damaging Het
Dennd4a C T 9: 64,911,755 (GRCm38) P1731S probably damaging Het
Dmxl1 T A 18: 49,870,984 (GRCm38) V892D possibly damaging Het
Fam131b A G 6: 42,321,248 (GRCm38) probably null Het
Fam83b T A 9: 76,491,850 (GRCm38) D657V possibly damaging Het
Fam83e T A 7: 45,722,363 (GRCm38) probably null Het
Fbxo4 A T 15: 3,977,819 (GRCm38) I121N probably damaging Het
Gabrg2 A G 11: 41,968,820 (GRCm38) S202P probably damaging Het
Grid2 T A 6: 64,663,162 (GRCm38) I788N probably damaging Het
Grik4 T A 9: 42,688,023 (GRCm38) N53Y probably damaging Het
Hipk2 A C 6: 38,730,867 (GRCm38) probably null Het
Hps5 T C 7: 46,789,196 (GRCm38) T38A probably damaging Het
Hs1bp3 A G 12: 8,341,843 (GRCm38) D315G possibly damaging Het
Kdm4a C T 4: 118,138,876 (GRCm38) M985I probably damaging Het
Kdm5d A G Y: 900,525 (GRCm38) Y190C probably damaging Het
Krt86 T C 15: 101,476,610 (GRCm38) S295P probably damaging Het
Matr3 T A 18: 35,587,738 (GRCm38) D413E probably benign Het
Mbd5 T A 2: 49,274,645 (GRCm38) F319L probably damaging Het
Mcoln1 T A 8: 3,510,910 (GRCm38) Y411N probably damaging Het
Mpdz C A 4: 81,285,474 (GRCm38) E1863* probably null Het
Mrps9 A G 1: 42,895,378 (GRCm38) E173G probably damaging Het
Or7a42 A T 10: 78,955,357 (GRCm38) I51F probably benign Het
Osmr T C 15: 6,821,047 (GRCm38) T692A probably benign Het
Pkhd1l1 A T 15: 44,578,588 (GRCm38) H3641L possibly damaging Het
Pml T C 9: 58,233,182 (GRCm38) T421A possibly damaging Het
Podxl A G 6: 31,528,456 (GRCm38) probably null Het
Ppargc1b C G 18: 61,309,093 (GRCm38) D591H probably damaging Het
Prkag3 A G 1: 74,748,816 (GRCm38) probably benign Het
Proz A G 8: 13,073,448 (GRCm38) R240G probably benign Het
Ptpn13 C A 5: 103,476,960 (GRCm38) D43E probably damaging Het
Rbm5 T G 9: 107,760,326 (GRCm38) K135N probably damaging Het
Ska1 G A 18: 74,197,528 (GRCm38) T201M probably damaging Het
Slc35f5 A C 1: 125,587,363 (GRCm38) probably null Het
Slc9a3 T C 13: 74,161,723 (GRCm38) L510P probably damaging Het
Speer4a2 T C 5: 26,084,718 (GRCm38) E237G probably damaging Het
Svil A G 18: 5,082,828 (GRCm38) K1231E probably damaging Het
Tanc2 T C 11: 105,922,613 (GRCm38) S1628P possibly damaging Het
Tm9sf3 T A 19: 41,240,584 (GRCm38) D260V probably damaging Het
Vps13b A G 15: 35,917,061 (GRCm38) I3684V probably damaging Het
Vps8 T C 16: 21,461,439 (GRCm38) probably null Het
Vwa3b T A 1: 37,076,439 (GRCm38) I328N probably damaging Het
Wdr1 C T 5: 38,530,023 (GRCm38) V222M probably benign Het
Xpnpep1 T A 19: 52,997,008 (GRCm38) T530S probably damaging Het
Zc3h6 C T 2: 128,993,277 (GRCm38) S111F probably benign Het
Zfp768 G A 7: 127,344,546 (GRCm38) P137S probably benign Het
Other mutations in Ttc9
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01017:Ttc9 APN 12 81,631,762 (GRCm38) missense possibly damaging 0.47
IGL02366:Ttc9 APN 12 81,631,610 (GRCm38) missense possibly damaging 0.92
R0494:Ttc9 UTSW 12 81,631,649 (GRCm38) missense probably damaging 1.00
R1892:Ttc9 UTSW 12 81,631,777 (GRCm38) missense probably benign
R2069:Ttc9 UTSW 12 81,631,796 (GRCm38) missense probably damaging 1.00
R4679:Ttc9 UTSW 12 81,631,601 (GRCm38) missense probably damaging 0.99
R5828:Ttc9 UTSW 12 81,631,676 (GRCm38) missense probably benign 0.01
R8200:Ttc9 UTSW 12 81,660,661 (GRCm38) missense probably damaging 1.00
R8675:Ttc9 UTSW 12 81,660,605 (GRCm38) missense probably damaging 1.00
R9626:Ttc9 UTSW 12 81,663,527 (GRCm38) missense probably benign 0.00
Predicted Primers PCR Primer

Sequencing Primer
Posted On 2017-02-10