Mutagenetix > Incidental Mutation

Incidental Mutation 'R5878:Fezf1'

455649

Institutional Source

Beutler Lab

Gene Symbol

Fezf1

Ensembl Gene

ENSMUSG00000029697

Gene Name

Fez family zinc finger 1

Synonyms

3110069A13Rik, Zfp312-like, Fez

MMRRC Submission

044084-MU

Accession Numbers

Essential gene?

Essential (E-score: 1.000) question?

Stock #

R5878 (G1)

Quality Score

200

Status

Validated

Chromosome

Chromosomal Location

23245043-23248361 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

C to A at 23247580 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Arginine to Leucine at position 165 (R165L)

Ref Sequence

ENSEMBL: ENSMUSP00000031709 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000031709]

AlphaFold

Q0VDQ9

Predicted Effect

possibly damaging
Transcript: ENSMUST00000031709
AA Change: R165L

PolyPhen 2 Score 0.712 (Sensitivity: 0.86; Specificity: 0.92)

SMART Domains

Protein: ENSMUSP00000031709
Gene: ENSMUSG00000029697
AA Change: R165L

Domain	Start	End	E-Value	Type
low complexity region	102	114	N/A	INTRINSIC
ZnF_C2H2	260	282	1.58e-3	SMART
ZnF_C2H2	288	310	3.39e-3	SMART
ZnF_C2H2	316	338	1.38e-3	SMART
ZnF_C2H2	344	366	2.57e-3	SMART
ZnF_C2H2	372	394	2.53e-2	SMART
ZnF_C2H2	400	423	1.38e-3	SMART
low complexity region	441	467	N/A	INTRINSIC

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000202489

Meta Mutation Damage Score

0.0619

Coding Region Coverage

1x: 99.9%
3x: 99.6%
10x: 97.9%
20x: 93.7%

Validation Efficiency

99% (66/67)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a transcriptional repressor that belongs to the zinc finger double domain protein family. The encoded protein is thought to play a role in the embryonic migration of gonadotropin-releasing hormone neurons into the brain. Mutations in this gene are associated with hypogonadotropic hypogonadism-22 with anosmia. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2014]
PHENOTYPE: Mice homozygous for a null mutation of this gene display neonatal lethality, impaired olfactory bulb development and impaired olfactory bulb interneuron migration. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 64 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
Abca12	A	T	1: 71,385,792 (GRCm39)	N275K	possibly damaging	Het
Abhd6	G	A	14: 8,028,286 (GRCm38)	V6I	probably benign	Het
Afap1l2	T	C	19: 56,904,107 (GRCm39)	T727A	probably benign	Het
Aggf1	T	C	13: 95,506,065 (GRCm39)	E174G	probably benign	Het
Ahnak	T	G	19: 8,985,706 (GRCm39)	L2330R	probably damaging	Het
Arb2a	T	A	13: 78,100,186 (GRCm39)	V129E	probably damaging	Het
Arfgef2	A	G	2: 166,712,137 (GRCm39)	T1205A	probably benign	Het
Ccdc3	T	C	2: 5,233,827 (GRCm39)	L217P	probably benign	Het
Cfap54	T	C	10: 92,800,423 (GRCm39)	D1595G	probably benign	Het
Cps1	G	T	1: 67,197,037 (GRCm39)		probably null	Het
Fam120b	A	G	17: 15,622,502 (GRCm39)	D160G	probably damaging	Het
Fkbp15	A	T	4: 62,225,145 (GRCm39)	L838H	probably benign	Het
Frmd3	G	A	4: 74,071,847 (GRCm39)	G243D	probably damaging	Het
Gldc	A	T	19: 30,120,867 (GRCm39)		probably null	Het
Gm10188	T	C	1: 132,156,940 (GRCm39)		probably benign	Het
Gm5190	T	A	12: 113,360,859 (GRCm39)		noncoding transcript	Het
Gria1	T	C	11: 57,208,628 (GRCm39)		probably null	Het
Hdhd5	A	G	6: 120,491,485 (GRCm39)	L206P	probably damaging	Het
Herc2	A	G	7: 55,773,996 (GRCm39)	N1149S	probably benign	Het
Inca1	G	A	11: 70,586,808 (GRCm39)		probably benign	Het
Iqch	G	A	9: 63,455,272 (GRCm39)	S175F	probably damaging	Het
Itpr3	T	G	17: 27,329,836 (GRCm39)	D1543E	probably benign	Het
Khk	T	A	5: 31,088,219 (GRCm39)		probably null	Het
Kiz	C	T	2: 146,731,521 (GRCm39)	S337L	probably damaging	Het
Lzts3	G	A	2: 130,478,459 (GRCm39)	T213I	probably damaging	Het
Mab21l2	T	A	3: 86,454,025 (GRCm39)	D325V	probably damaging	Het
Mctp2	A	G	7: 71,863,856 (GRCm39)	S336P	probably benign	Het
Me3	T	A	7: 89,497,214 (GRCm39)	L405Q	probably benign	Het
Mgst2	A	T	3: 51,568,651 (GRCm39)		probably benign	Het
Myh2	A	G	11: 67,083,330 (GRCm39)	E1431G	probably damaging	Het
Naip6	A	G	13: 100,436,181 (GRCm39)	S781P	probably damaging	Het
Nr3c2	A	G	8: 77,634,897 (GRCm39)		probably null	Het
Or10ab5	A	T	7: 108,244,946 (GRCm39)	L279Q	probably damaging	Het
Or6s1	A	G	14: 51,308,449 (GRCm39)	Y134H	probably damaging	Het
Or6x1	C	T	9: 40,098,867 (GRCm39)	T152I	probably benign	Het
Otop1	G	T	5: 38,435,166 (GRCm39)	R132L	possibly damaging	Het
Parg	T	A	14: 31,939,619 (GRCm39)	D548E	possibly damaging	Het
Pcdhga4	G	T	18: 37,820,739 (GRCm39)	G763W	probably benign	Het
Pde10a	A	G	17: 9,168,204 (GRCm39)	N9S	possibly damaging	Het
Pi4k2a	T	C	19: 42,089,080 (GRCm39)	I147T	probably benign	Het
Polh	T	A	17: 46,505,251 (GRCm39)	T122S	probably damaging	Het
Ptpn13	T	C	5: 103,624,984 (GRCm39)	V96A	possibly damaging	Het
Ptpn6	C	A	6: 124,705,748 (GRCm39)	C132F	probably damaging	Het
Rbm19	T	A	5: 120,270,932 (GRCm39)	V585E	probably damaging	Het
Relch	T	A	1: 105,620,685 (GRCm39)	S387T	probably benign	Het
Rp1l1	C	T	14: 64,266,355 (GRCm39)	P647L	probably benign	Het
Rrp1b	A	G	17: 32,266,649 (GRCm39)	E72G	probably damaging	Het
Shcbp1	A	T	8: 4,798,742 (GRCm39)	H392Q	probably benign	Het
Skic2	C	T	17: 35,065,093 (GRCm39)	R371Q	possibly damaging	Het
Slc13a5	G	A	11: 72,144,217 (GRCm39)	T287I	possibly damaging	Het
Slc22a27	T	A	19: 7,904,122 (GRCm39)	E5V	probably benign	Het
Slc38a2	A	G	15: 96,590,465 (GRCm39)	V293A	probably damaging	Het
Slco6d1	T	A	1: 98,391,561 (GRCm39)		probably benign	Het
Sri	G	C	5: 8,109,353 (GRCm39)	D46H	probably damaging	Het
Tango6	A	G	8: 107,415,800 (GRCm39)	D207G	possibly damaging	Het
Tigd4	T	C	3: 84,501,749 (GRCm39)	M222T	probably benign	Het
Tmem229a	T	C	6: 24,955,172 (GRCm39)	D194G	probably benign	Het
Trank1	T	C	9: 111,195,753 (GRCm39)	V1259A	possibly damaging	Het
Trdv5	T	C	14: 54,386,255 (GRCm39)	D70G	probably benign	Het
Trim52	T	A	14: 106,344,375 (GRCm39)	M11K	probably damaging	Het
Wdr62	A	G	7: 29,940,772 (GRCm39)	M882T	probably benign	Het
Ybx3	A	G	6: 131,344,726 (GRCm39)		probably null	Het
Zfand2b	A	G	1: 75,147,154 (GRCm39)		probably benign	Het
Zfp91	T	A	19: 12,747,684 (GRCm39)	T480S	possibly damaging	Het

Other mutations in Fezf1

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01067:Fezf1	APN	6	23,247,842 (GRCm39)	missense	possibly damaging	0.76
IGL02538:Fezf1	APN	6	23,246,557 (GRCm39)	missense	probably damaging	1.00
IGL02983:Fezf1	APN	6	23,247,871 (GRCm39)	missense	probably damaging	0.99
IGL03372:Fezf1	APN	6	23,246,909 (GRCm39)	missense	probably damaging	1.00
R0494:Fezf1	UTSW	6	23,246,054 (GRCm39)	missense	probably damaging	1.00
R0612:Fezf1	UTSW	6	23,247,028 (GRCm39)	missense	probably damaging	1.00
R0836:Fezf1	UTSW	6	23,246,998 (GRCm39)	missense	probably benign	0.01
R1930:Fezf1	UTSW	6	23,246,906 (GRCm39)	missense	probably damaging	1.00
R1931:Fezf1	UTSW	6	23,246,906 (GRCm39)	missense	probably damaging	1.00
R2103:Fezf1	UTSW	6	23,247,331 (GRCm39)	missense	possibly damaging	0.55
R2104:Fezf1	UTSW	6	23,247,331 (GRCm39)	missense	possibly damaging	0.55
R2233:Fezf1	UTSW	6	23,246,002 (GRCm39)	missense	probably damaging	1.00
R3404:Fezf1	UTSW	6	23,247,283 (GRCm39)	missense	probably benign	0.13
R3950:Fezf1	UTSW	6	23,247,419 (GRCm39)	nonsense	probably null
R4209:Fezf1	UTSW	6	23,246,616 (GRCm39)	missense	probably damaging	0.99
R4400:Fezf1	UTSW	6	23,247,709 (GRCm39)	missense	probably benign	0.22
R4614:Fezf1	UTSW	6	23,247,857 (GRCm39)	missense	possibly damaging	0.71
R5287:Fezf1	UTSW	6	23,248,010 (GRCm39)	missense	probably benign
R5943:Fezf1	UTSW	6	23,246,948 (GRCm39)	nonsense	probably null
R5952:Fezf1	UTSW	6	23,247,427 (GRCm39)	missense	probably benign	0.08
R6663:Fezf1	UTSW	6	23,247,527 (GRCm39)	missense	probably damaging	1.00
R7158:Fezf1	UTSW	6	23,245,789 (GRCm39)	missense	probably benign
R7184:Fezf1	UTSW	6	23,247,835 (GRCm39)	missense	probably benign	0.31
R8679:Fezf1	UTSW	6	23,247,769 (GRCm39)	missense	probably benign
R9137:Fezf1	UTSW	6	23,246,511 (GRCm39)	splice site	probably benign
R9294:Fezf1	UTSW	6	23,245,797 (GRCm39)	missense	possibly damaging	0.96
R9510:Fezf1	UTSW	6	23,247,845 (GRCm39)	missense	probably benign	0.01
R9668:Fezf1	UTSW	6	23,247,574 (GRCm39)	missense	probably benign	0.00
X0025:Fezf1	UTSW	6	23,247,908 (GRCm39)	missense	probably benign

Predicted Primers

PCR Primer
(F):5'- TGTAATGCTGCAGCTGAGC -3'
(R):5'- CAAGGCGAGTTTGGAGGTTC -3'

Sequencing Primer
(F):5'- TGCAGCTGAGCCTGGGAC -3'
(R):5'- TTTGGAGGTTCCGGCGC -3'

Posted On

2017-02-10